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The map label for this gene is ybhS [H]

Identifier: 157369570

GI number: 157369570

Start: 1456106

End: 1457260

Strand: Reverse

Name: ybhS [H]

Synonym: Spro_1327

Alternate gene names: 157369570

Gene position: 1457260-1456106 (Counterclockwise)

Preceding gene: 157369571

Following gene: 157369569

Centisome position: 26.74

GC content: 58.01

Gene sequence:

>1155_bases
ATGAACAGTCAAACCGCCACCCGCGACGACAGTGGTTTTTCCTGGCGACGGCTGCGCGCGCTGTGCCTGAAAGAAACGCG
GCAAATTCTGCGCGATCCAAGCAGCGGGCTGATCGCCTTTGTCATTCCCCTGATGCTGCTGTTTATCTTTGGCTATGGCA
TCAACCTGGACTCCAGCAAACTGAGGCTGGGCATCCTGATGGAACAGCAGAGCGAAGAGGCGCGTGATTTGGCCAATGCC
TTTGCCGGTTCGCCCTATATCGAGCCGACCATCAGCGACAACCGTCAGCAGTTGATCCAACTGATGCAGGCCGGACGCAT
CCGCGGGCTGGTGGTGATCCCCAACGATTTTGCCCAACGTATGGCGCGGCCGCACGACAGCGCACCGATTCAAATTATCA
CCGACGGCAGCGAGCCGAACACCGCCAACTTTGTTCAGGGCTATACCCAGGGGGTGTGGCAAGTCTGGCAACAGCAGCGC
GCCACCGACCGCGGGCGCGAGGAAAAACCCTTAATCGACGTGCAGATGCGCTATTGGTTCAACCCGGCGGCCATCAGCCG
GCACTACATCATTCCCGGCGCTATCACCATTATCATGACGGTGATCGGCGCTATCCTCACCTCTTTGGTGATCGCACGCG
AGTGGGAGCGCGGCACCATGGAGGCACTGCTTTCCACCCAGGTGACGCGTACTGAGCTGCTGCTGTCCAAACTGGTGCCC
TACTATTTCCTCGGCATGATCGCCATGGTGTTATGCATGGCGGTATCGGTGTGGGTGCTCGGCGTGCCTTATCGCGGTTC
GCTGCTGATTTTATTCGTTATCAGCAGCCTGTTCCTGGCCAGCACACTCGGCATGGGGCTGCTGATTTCGACCATTACCC
GCAACCAGTTTAACGCAGCGATGGTGGCACTCAACGCCGCTTTTCTGCCATCGATCATGCTGTCCGGCTTTATCTTCCAG
ATCGACAGCATGCCGGCCATCGTACGCGCCGTAACCTATATCATTCCGGCGCGTTATTTCGTCAGCACGCTGCAAACGCT
GTTCCTGGCGGGCAACGTCGGTACGGTGTTGATGATTAACTTGCTGTTCCTGATCGCTTCGGCGGTGGTGTTTATCGGCC
TGACGGCCTGGAAAACCCAGCGGCGGCTGGATTAA

Upstream 100 bases:

>100_bases
ACGATCTCAAGCACCAGGTCGCCAGCAGCGATAACCCCAATCCATCAATGGAACAGGCGTTTATCGAACTGGTGCAGGGT
TACGATCAGGAGGAAAAAGC

Downstream 100 bases:

>100_bases
GGGGAATACGATGTTTCACCGTCTCTGGACGTTAATCATAAAGGAAATGCAGTCGCTGCTGCGCGATCCGCAGACCCGCG
CCATTCTTATTTTGCCGGTT

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MNSQTATRDDSGFSWRRLRALCLKETRQILRDPSSGLIAFVIPLMLLFIFGYGINLDSSKLRLGILMEQQSEEARDLANA
FAGSPYIEPTISDNRQQLIQLMQAGRIRGLVVIPNDFAQRMARPHDSAPIQIITDGSEPNTANFVQGYTQGVWQVWQQQR
ATDRGREEKPLIDVQMRYWFNPAAISRHYIIPGAITIIMTVIGAILTSLVIAREWERGTMEALLSTQVTRTELLLSKLVP
YYFLGMIAMVLCMAVSVWVLGVPYRGSLLILFVISSLFLASTLGMGLLISTITRNQFNAAMVALNAAFLPSIMLSGFIFQ
IDSMPAIVRAVTYIIPARYFVSTLQTLFLAGNVGTVLMINLLFLIASAVVFIGLTAWKTQRRLD

Sequences:

>Translated_384_residues
MNSQTATRDDSGFSWRRLRALCLKETRQILRDPSSGLIAFVIPLMLLFIFGYGINLDSSKLRLGILMEQQSEEARDLANA
FAGSPYIEPTISDNRQQLIQLMQAGRIRGLVVIPNDFAQRMARPHDSAPIQIITDGSEPNTANFVQGYTQGVWQVWQQQR
ATDRGREEKPLIDVQMRYWFNPAAISRHYIIPGAITIIMTVIGAILTSLVIAREWERGTMEALLSTQVTRTELLLSKLVP
YYFLGMIAMVLCMAVSVWVLGVPYRGSLLILFVISSLFLASTLGMGLLISTITRNQFNAAMVALNAAFLPSIMLSGFIFQ
IDSMPAIVRAVTYIIPARYFVSTLQTLFLAGNVGTVLMINLLFLIASAVVFIGLTAWKTQRRLD
>Mature_384_residues
MNSQTATRDDSGFSWRRLRALCLKETRQILRDPSSGLIAFVIPLMLLFIFGYGINLDSSKLRLGILMEQQSEEARDLANA
FAGSPYIEPTISDNRQQLIQLMQAGRIRGLVVIPNDFAQRMARPHDSAPIQIITDGSEPNTANFVQGYTQGVWQVWQQQR
ATDRGREEKPLIDVQMRYWFNPAAISRHYIIPGAITIIMTVIGAILTSLVIAREWERGTMEALLSTQVTRTELLLSKLVP
YYFLGMIAMVLCMAVSVWVLGVPYRGSLLILFVISSLFLASTLGMGLLISTITRNQFNAAMVALNAAFLPSIMLSGFIFQ
IDSMPAIVRAVTYIIPARYFVSTLQTLFLAGNVGTVLMINLLFLIASAVVFIGLTAWKTQRRLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=372, Percent_Identity=80.1075268817204, Blast_Score=600, Evalue=1e-173,
Organism=Escherichia coli, GI48994943, Length=345, Percent_Identity=32.463768115942, Blast_Score=169, Evalue=3e-43,
Organism=Escherichia coli, GI1787010, Length=335, Percent_Identity=26.865671641791, Blast_Score=151, Evalue=6e-38,
Organism=Escherichia coli, GI226510979, Length=349, Percent_Identity=24.9283667621776, Blast_Score=79, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24650853, Length=366, Percent_Identity=21.8579234972678, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24650855, Length=366, Percent_Identity=21.8579234972678, Blast_Score=69, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 42863; Mature: 42863

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSQTATRDDSGFSWRRLRALCLKETRQILRDPSSGLIAFVIPLMLLFIFGYGINLDSSK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
LRLGILMEQQSEEARDLANAFAGSPYIEPTISDNRQQLIQLMQAGRIRGLVVIPNDFAQR
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHH
MARPHDSAPIQIITDGSEPNTANFVQGYTQGVWQVWQQQRATDRGREEKPLIDVQMRYWF
HCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHEE
NPAAISRHYIIPGAITIIMTVIGAILTSLVIAREWERGTMEALLSTQVTRTELLLSKLVP
CHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
YYFLGMIAMVLCMAVSVWVLGVPYRGSLLILFVISSLFLASTLGMGLLISTITRNQFNAA
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVALNAAFLPSIMLSGFIFQIDSMPAIVRAVTYIIPARYFVSTLQTLFLAGNVGTVLMIN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LLFLIASAVVFIGLTAWKTQRRLD
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSQTATRDDSGFSWRRLRALCLKETRQILRDPSSGLIAFVIPLMLLFIFGYGINLDSSK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
LRLGILMEQQSEEARDLANAFAGSPYIEPTISDNRQQLIQLMQAGRIRGLVVIPNDFAQR
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHH
MARPHDSAPIQIITDGSEPNTANFVQGYTQGVWQVWQQQRATDRGREEKPLIDVQMRYWF
HCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHEE
NPAAISRHYIIPGAITIIMTVIGAILTSLVIAREWERGTMEALLSTQVTRTELLLSKLVP
CHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
YYFLGMIAMVLCMAVSVWVLGVPYRGSLLILFVISSLFLASTLGMGLLISTITRNQFNAA
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVALNAAFLPSIMLSGFIFQIDSMPAIVRAVTYIIPARYFVSTLQTLFLAGNVGTVLMIN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LLFLIASAVVFIGLTAWKTQRRLD
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]