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The map label for this gene is ybhR [H]

Identifier: 157369569

GI number: 157369569

Start: 1454989

End: 1456095

Strand: Reverse

Name: ybhR [H]

Synonym: Spro_1326

Alternate gene names: 157369569

Gene position: 1456095-1454989 (Counterclockwise)

Preceding gene: 157369570

Following gene: 157369562

Centisome position: 26.72

GC content: 56.46

Gene sequence:

>1107_bases
ATGTTTCACCGTCTCTGGACGTTAATCATAAAGGAAATGCAGTCGCTGCTGCGCGATCCGCAGACCCGCGCCATTCTTAT
TTTGCCGGTTATTCTGCAGGTGCTGCTGTTCCCGTTCGCCGCCACGCTGGAGGTGACCAACGCCACCATCGCTGTCTACA
GCGAAGACAGCGGCCATGCCTCGGTCGAACTGACCCAGCGCTTCGCCAAAGCCAAGGCCTTCTCGCATGTGCTGCTGTTG
CGTAGCCCACAAGAGATTCAAACCACCATCGACAACCAAAAAGCGCTGCTGCTGATCCGCTTCCCGGCCCAGTTCTCGCG
TGATATCGCGAGCGGCAATACGGCCCCGCTGCAACTGTTGCTTGACGGACGCAACTCCAACAGCGCGCAAATCGCCGCCA
ACTACGTGCAGCAGATTGTGCAGGACTATCAGAATGAGCTGATCGGTAACCGTGCCAAACCCAACAACAGCGAACTGGTA
ATACGCAACTGGTATAACCCGAATCTGGATTACAAGTGGTTCGTGGTGCCGTCGCTGATCGCCATGATCACCACCATTGG
CGTGCTGATTGTCACCTCGTTGTCGGTGGCGCGAGAACGTGAACAGGGCACGCTGGAGCAGTTGCTGGTGTCACCGCTGA
CCACCTGGCAGATTTTTATCGGCAAGGCGGTACCGGCGCTGATCGTCGCTACCTTCCAGGCCAGCATCGTGTTGCTGATC
GGTATATTTATCTATCAGATCCCGTTCGCCGGTTCGCTGCTGCTGTTCTACGGCACCATGCTGATTTACGGGCTGTCTTT
GGTCGGGTTCGGCCTGCTGATTTCGTCGCTGTGCGCCACTCAGCAACAGGCGTTTATCGGCGTTTTCGTGTTTATGATGC
CGGCGATCCTGCTTTCCGGCTATGTCTCGCCGGTAGAAAATATGCCGGTGTGGCTGCAAAACCTCACCTGGGTGAATCCC
ATCCGCCACTTTACCGACATCACCAAACAGATCTACCTGAAGGACGCCAGTTTCGGCATCATCTGGCATAGCCTGTGGCC
GCTACTGGCGATCACCGCCACCACCGGCAGCGCCGCTTACGCCATGTTCCGCCGTAAAATTGCATAA

Upstream 100 bases:

>100_bases
GTGTTGATGATTAACTTGCTGTTCCTGATCGCTTCGGCGGTGGTGTTTATCGGCCTGACGGCCTGGAAAACCCAGCGGCG
GCTGGATTAAGGGGAATACG

Downstream 100 bases:

>100_bases
AAAAAGACTCTGCGATCTCGATCGCAGAGTCTTTTTGATCTCCGGATACCCTATGAATTTCACGCTGCAGCTAGGCGACC
AGCCAGCTCATCCCCAGGCG

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MFHRLWTLIIKEMQSLLRDPQTRAILILPVILQVLLFPFAATLEVTNATIAVYSEDSGHASVELTQRFAKAKAFSHVLLL
RSPQEIQTTIDNQKALLLIRFPAQFSRDIASGNTAPLQLLLDGRNSNSAQIAANYVQQIVQDYQNELIGNRAKPNNSELV
IRNWYNPNLDYKWFVVPSLIAMITTIGVLIVTSLSVAREREQGTLEQLLVSPLTTWQIFIGKAVPALIVATFQASIVLLI
GIFIYQIPFAGSLLLFYGTMLIYGLSLVGFGLLISSLCATQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWVNP
IRHFTDITKQIYLKDASFGIIWHSLWPLLAITATTGSAAYAMFRRKIA

Sequences:

>Translated_368_residues
MFHRLWTLIIKEMQSLLRDPQTRAILILPVILQVLLFPFAATLEVTNATIAVYSEDSGHASVELTQRFAKAKAFSHVLLL
RSPQEIQTTIDNQKALLLIRFPAQFSRDIASGNTAPLQLLLDGRNSNSAQIAANYVQQIVQDYQNELIGNRAKPNNSELV
IRNWYNPNLDYKWFVVPSLIAMITTIGVLIVTSLSVAREREQGTLEQLLVSPLTTWQIFIGKAVPALIVATFQASIVLLI
GIFIYQIPFAGSLLLFYGTMLIYGLSLVGFGLLISSLCATQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWVNP
IRHFTDITKQIYLKDASFGIIWHSLWPLLAITATTGSAAYAMFRRKIA
>Mature_368_residues
MFHRLWTLIIKEMQSLLRDPQTRAILILPVILQVLLFPFAATLEVTNATIAVYSEDSGHASVELTQRFAKAKAFSHVLLL
RSPQEIQTTIDNQKALLLIRFPAQFSRDIASGNTAPLQLLLDGRNSNSAQIAANYVQQIVQDYQNELIGNRAKPNNSELV
IRNWYNPNLDYKWFVVPSLIAMITTIGVLIVTSLSVAREREQGTLEQLLVSPLTTWQIFIGKAVPALIVATFQASIVLLI
GIFIYQIPFAGSLLLFYGTMLIYGLSLVGFGLLISSLCATQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWVNP
IRHFTDITKQIYLKDASFGIIWHSLWPLLAITATTGSAAYAMFRRKIA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=367, Percent_Identity=85.2861035422343, Blast_Score=647, Evalue=0.0,
Organism=Escherichia coli, GI1787011, Length=340, Percent_Identity=27.0588235294118, Blast_Score=151, Evalue=8e-38,
Organism=Escherichia coli, GI48994943, Length=353, Percent_Identity=25.2124645892351, Blast_Score=126, Evalue=3e-30,
Organism=Escherichia coli, GI226510979, Length=376, Percent_Identity=26.8617021276596, Blast_Score=124, Evalue=1e-29,
Organism=Drosophila melanogaster, GI85725260, Length=369, Percent_Identity=22.4932249322493, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI85725262, Length=369, Percent_Identity=22.4932249322493, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24650853, Length=220, Percent_Identity=24.0909090909091, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24650855, Length=215, Percent_Identity=24.1860465116279, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41144; Mature: 41144

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHRLWTLIIKEMQSLLRDPQTRAILILPVILQVLLFPFAATLEVTNATIAVYSEDSGHA
CHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHEEEECEEEEEEECCCCCC
SVELTQRFAKAKAFSHVLLLRSPQEIQTTIDNQKALLLIRFPAQFSRDIASGNTAPLQLL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCHHHHHHHCCCCCCEEEEE
LDGRNSNSAQIAANYVQQIVQDYQNELIGNRAKPNNSELVIRNWYNPNLDYKWFVVPSLI
EECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEHHHHHH
AMITTIGVLIVTSLSVAREREQGTLEQLLVSPLTTWQIFIGKAVPALIVATFQASIVLLI
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIFIYQIPFAGSLLLFYGTMLIYGLSLVGFGLLISSLCATQQQAFIGVFVFMMPAILLSG
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVSPVENMPVWLQNLTWVNPIRHFTDITKQIYLKDASFGIIWHSLWPLLAITATTGSAAY
CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHEEECCCCHHHH
AMFRRKIA
HHHHHHCC
>Mature Secondary Structure
MFHRLWTLIIKEMQSLLRDPQTRAILILPVILQVLLFPFAATLEVTNATIAVYSEDSGHA
CHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHEEEECEEEEEEECCCCCC
SVELTQRFAKAKAFSHVLLLRSPQEIQTTIDNQKALLLIRFPAQFSRDIASGNTAPLQLL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCHHHHHHHCCCCCCEEEEE
LDGRNSNSAQIAANYVQQIVQDYQNELIGNRAKPNNSELVIRNWYNPNLDYKWFVVPSLI
EECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEHHHHHH
AMITTIGVLIVTSLSVAREREQGTLEQLLVSPLTTWQIFIGKAVPALIVATFQASIVLLI
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIFIYQIPFAGSLLLFYGTMLIYGLSLVGFGLLISSLCATQQQAFIGVFVFMMPAILLSG
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVSPVENMPVWLQNLTWVNPIRHFTDITKQIYLKDASFGIIWHSLWPLLAITATTGSAAY
CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHEEECCCCHHHH
AMFRRKIA
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]