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The map label for this gene is yecD [C]

Identifier: 157369537

GI number: 157369537

Start: 1423444

End: 1424016

Strand: Reverse

Name: yecD [C]

Synonym: Spro_1294

Alternate gene names: 157369537

Gene position: 1424016-1423444 (Counterclockwise)

Preceding gene: 157369538

Following gene: 157369536

Centisome position: 26.13

GC content: 53.93

Gene sequence:

>573_bases
ATGTCCGCCGCACTGATTATTATCGATCTTATCGACGATTTGATTGGCCCCAAAGGGCGTGCAAATCATTGCCGTGAACA
GGTGATCGCGCAAAATCTGATTGCCAACACCAATGCCGCTGCGGCTTACGCTCGGGTACGTAAAATTCCGGTGATTTGGG
TGCGCGTCGGTTTTGCCGATGACTATCACGATATTCCCGCCCACTCTCCGCTGTTCAACCACCTAAAACAGATCGGCGCG
CTGCGTTTAAGCAGTGTAGGTTGCCAGTGGGAGAAGGATTTGCAGGTATTACCTGCGGATTTTCAGTTCGAAAAGAACGG
TGTTTGCGCCTTTGCCGGTAACAATTTGTTAGCCTGGCTGCAGCAGCATCACTGCCATCATTTGTTGCTGGGCGGCGTCA
GTACCCCGCTGGCAATCGAGAGCACCGCCAGACAGGCGCACGACGCCGGTTTTCAGGTCAGCATCTTGCAGGACTTGTGC
GCCGCACCAACTCTGGAGATGCACCAGCAGAGCCTGGATATTCTGCAGAATCTGGCGGAAATCACTCGTTCATCGGCCTG
GATGAAGGGCTGA

Upstream 100 bases:

>100_bases
TTTGCCACTCATCCGATGACATATCCGGCAACACTTCCCCGGTAACACATCACATTTGGCCTTTTATCATAAGGGGAAAG
GATTCGTTTCTGGAGACACT

Downstream 100 bases:

>100_bases
ACGCACTATTTCACCCACTGCACCGACCTTTACTGTCATTTCACTGTGCTACTATCCAAAATAGTGCCCAACTCACCGAT
CATCAGCACACCGATAAAGC

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: Isochorismatase Family Protein; Isochorismatase Hydrolase Family Protein; Chorismatase Hydrolase

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSAALIIIDLIDDLIGPKGRANHCREQVIAQNLIANTNAAAAYARVRKIPVIWVRVGFADDYHDIPAHSPLFNHLKQIGA
LRLSSVGCQWEKDLQVLPADFQFEKNGVCAFAGNNLLAWLQQHHCHHLLLGGVSTPLAIESTARQAHDAGFQVSILQDLC
AAPTLEMHQQSLDILQNLAEITRSSAWMKG

Sequences:

>Translated_190_residues
MSAALIIIDLIDDLIGPKGRANHCREQVIAQNLIANTNAAAAYARVRKIPVIWVRVGFADDYHDIPAHSPLFNHLKQIGA
LRLSSVGCQWEKDLQVLPADFQFEKNGVCAFAGNNLLAWLQQHHCHHLLLGGVSTPLAIESTARQAHDAGFQVSILQDLC
AAPTLEMHQQSLDILQNLAEITRSSAWMKG
>Mature_189_residues
SAALIIIDLIDDLIGPKGRANHCREQVIAQNLIANTNAAAAYARVRKIPVIWVRVGFADDYHDIPAHSPLFNHLKQIGAL
RLSSVGCQWEKDLQVLPADFQFEKNGVCAFAGNNLLAWLQQHHCHHLLLGGVSTPLAIESTARQAHDAGFQVSILQDLCA
APTLEMHQQSLDILQNLAEITRSSAWMKG

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081992, Length=177, Percent_Identity=29.3785310734463, Blast_Score=64, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20885; Mature: 20754

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAALIIIDLIDDLIGPKGRANHCREQVIAQNLIANTNAAAAYARVRKIPVIWVRVGFAD
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCC
DYHDIPAHSPLFNHLKQIGALRLSSVGCQWEKDLQVLPADFQFEKNGVCAFAGNNLLAWL
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCEECCCCEEEEECCHHHHHH
QQHHCHHLLLGGVSTPLAIESTARQAHDAGFQVSILQDLCAAPTLEMHQQSLDILQNLAE
HHHCHHHEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ITRSSAWMKG
HHHHHCCCCC
>Mature Secondary Structure 
SAALIIIDLIDDLIGPKGRANHCREQVIAQNLIANTNAAAAYARVRKIPVIWVRVGFAD
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCC
DYHDIPAHSPLFNHLKQIGALRLSSVGCQWEKDLQVLPADFQFEKNGVCAFAGNNLLAWL
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCEECCCCEEEEECCHHHHHH
QQHHCHHLLLGGVSTPLAIESTARQAHDAGFQVSILQDLCAAPTLEMHQQSLDILQNLAE
HHHCHHHEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ITRSSAWMKG
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA