| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is zitB [H]
Identifier: 157369527
GI number: 157369527
Start: 1411353
End: 1412303
Strand: Reverse
Name: zitB [H]
Synonym: Spro_1284
Alternate gene names: 157369527
Gene position: 1412303-1411353 (Counterclockwise)
Preceding gene: 157369528
Following gene: 157369505
Centisome position: 25.92
GC content: 57.1
Gene sequence:
>951_bases ATGTCGGACGCCCCACACGTACACCAGCCAAAAGACAGTAATAGTAAACGCCTACTGACCGCTTTTTTAGTCACCGCGGT CTTTATGGTCGCCGAAGTGGCCGGCGGGTTAATTTCAGGTTCACTGGCGCTGCTGGCGGATGCCGGCCATATGCTCACCG ACGCCGCCGCGCTGCTGGTGGCCTTGATGGCCGTCCACTTCTCACAGCGTAAGCCCAATGCGCGCCACACCTTCGGTTAT CTGCGTCTGACCACCCTGGCGGCCTTCCTCAACGCCGCCGCGCTGTTGGTGATCGTGGTATTCATCCTGTGGGAGGCGAT ACGGCGTTTCTTCGAGCCACAGCCGGTGATGGGTACGCCAATGCTGATTATCGCCATAGCGGGGCTGCTGGCCAACCTGT TCGCCTTCTGGTTACTGCACCGGGGCAGCGAAGAGAAAAATATCAATGTGCGCGCTGCCGCATTGCATGTGCTGGGTGAT TTACTGGGGTCGGTGGGTGCCATCGCCGCCGCCATTGTGATCCTTACCACTGGCTGGACGCCGATTGACCCGATATTGTC AGTGCTGGTGTCTTGTCTGGTGATACGCAGCGCCTGGCGACTGCTGAAAGAGAGTTTCCACGAGCTGCTGGAGGGCACGC CGCAGGAGGTGGACATCAACAAGTTGCAAAAGGACCTGTGCCTGAATATTCCGGAAGTACGCAATATTCATCACGTCCAT GTGTGGCAGATTGGTGAACAAAAGTTGATGACGCTGCATGCGCAGGTGATACCGCCGCACGACCATGATGGCCTGCTGCG CCGTATTCAGGCCTATCTGCTGGAGCACTATCGGATTGGTCACGTAACCATTCAGATGGAATATCAGCACTGTGATACAC CCGACTGTGGGATTAACCGGGCCCCCGAGCCGAGTGACCACTCACATTCACATGTGGGACATCATCACTAG
Upstream 100 bases:
>100_bases CCTATACTGAATTGAGTACGTTAGTGGAACAGATCCTGATAGAACTGGATAATCTGGTCAGCACTGACGAGTCGTATTTT GCTATGGATAAGGAAGAATA
Downstream 100 bases:
>100_bases AATCCACTGGGGCGCCTTATTCGGCGCCCCAGTTATGTTATGGTGCAGAAGATAATGGCCGCGATTGATTGTTGCCGGCG CTTTTGATCCACAGCCAGGA
Product: zinc transporter ZitB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSDAPHVHQPKDSNSKRLLTAFLVTAVFMVAEVAGGLISGSLALLADAGHMLTDAAALLVALMAVHFSQRKPNARHTFGY LRLTTLAAFLNAAALLVIVVFILWEAIRRFFEPQPVMGTPMLIIAIAGLLANLFAFWLLHRGSEEKNINVRAAALHVLGD LLGSVGAIAAAIVILTTGWTPIDPILSVLVSCLVIRSAWRLLKESFHELLEGTPQEVDINKLQKDLCLNIPEVRNIHHVH VWQIGEQKLMTLHAQVIPPHDHDGLLRRIQAYLLEHYRIGHVTIQMEYQHCDTPDCGINRAPEPSDHSHSHVGHHH
Sequences:
>Translated_316_residues MSDAPHVHQPKDSNSKRLLTAFLVTAVFMVAEVAGGLISGSLALLADAGHMLTDAAALLVALMAVHFSQRKPNARHTFGY LRLTTLAAFLNAAALLVIVVFILWEAIRRFFEPQPVMGTPMLIIAIAGLLANLFAFWLLHRGSEEKNINVRAAALHVLGD LLGSVGAIAAAIVILTTGWTPIDPILSVLVSCLVIRSAWRLLKESFHELLEGTPQEVDINKLQKDLCLNIPEVRNIHHVH VWQIGEQKLMTLHAQVIPPHDHDGLLRRIQAYLLEHYRIGHVTIQMEYQHCDTPDCGINRAPEPSDHSHSHVGHHH >Mature_315_residues SDAPHVHQPKDSNSKRLLTAFLVTAVFMVAEVAGGLISGSLALLADAGHMLTDAAALLVALMAVHFSQRKPNARHTFGYL RLTTLAAFLNAAALLVIVVFILWEAIRRFFEPQPVMGTPMLIIAIAGLLANLFAFWLLHRGSEEKNINVRAAALHVLGDL LGSVGAIAAAIVILTTGWTPIDPILSVLVSCLVIRSAWRLLKESFHELLEGTPQEVDINKLQKDLCLNIPEVRNIHHVHV WQIGEQKLMTLHAQVIPPHDHDGLLRRIQAYLLEHYRIGHVTIQMEYQHCDTPDCGINRAPEPSDHSHSHVGHHH
Specific function: Involved in zinc efflux across the cytoplasmic membrane, thus reducing zinc accumulation in the cytoplasm and rendering bacteria more resistant to zinc. It may contribute to zinc homeostasis at low concentrations of zinc [H]
COG id: COG1230
COG function: function code P; Co/Zn/Cd efflux system component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily [H]
Homologues:
Organism=Homo sapiens, GI52352805, Length=315, Percent_Identity=29.2063492063492, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI21359890, Length=318, Percent_Identity=29.874213836478, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI289803013, Length=296, Percent_Identity=30.7432432432432, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI289803009, Length=296, Percent_Identity=30.7432432432432, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI289803007, Length=296, Percent_Identity=30.7432432432432, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI289803003, Length=296, Percent_Identity=30.7432432432432, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI64762489, Length=296, Percent_Identity=30.7432432432432, Blast_Score=131, Evalue=6e-31, Organism=Homo sapiens, GI21361112, Length=307, Percent_Identity=29.6416938110749, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI20070323, Length=338, Percent_Identity=25.4437869822485, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI14210520, Length=230, Percent_Identity=26.9565217391304, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI52352803, Length=130, Percent_Identity=40.7692307692308, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI52351208, Length=160, Percent_Identity=30, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI222080086, Length=129, Percent_Identity=29.4573643410853, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI40255009, Length=129, Percent_Identity=29.4573643410853, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI1786966, Length=292, Percent_Identity=69.1780821917808, Blast_Score=377, Evalue=1e-106, Organism=Escherichia coli, GI1790349, Length=223, Percent_Identity=23.7668161434978, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193210990, Length=330, Percent_Identity=31.5151515151515, Blast_Score=154, Evalue=4e-38, Organism=Caenorhabditis elegans, GI17555794, Length=317, Percent_Identity=30.2839116719243, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17555796, Length=317, Percent_Identity=29.6529968454259, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI32564488, Length=303, Percent_Identity=30.03300330033, Blast_Score=120, Evalue=9e-28, Organism=Caenorhabditis elegans, GI17550440, Length=126, Percent_Identity=31.7460317460317, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17550442, Length=126, Percent_Identity=31.7460317460317, Blast_Score=72, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6324892, Length=136, Percent_Identity=37.5, Blast_Score=91, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6323899, Length=126, Percent_Identity=38.0952380952381, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6320411, Length=179, Percent_Identity=34.0782122905028, Blast_Score=86, Evalue=6e-18, Organism=Drosophila melanogaster, GI24656728, Length=341, Percent_Identity=28.7390029325513, Blast_Score=118, Evalue=5e-27, Organism=Drosophila melanogaster, GI24656724, Length=341, Percent_Identity=28.7390029325513, Blast_Score=118, Evalue=5e-27, Organism=Drosophila melanogaster, GI24656720, Length=341, Percent_Identity=28.7390029325513, Blast_Score=118, Evalue=5e-27, Organism=Drosophila melanogaster, GI24656715, Length=341, Percent_Identity=28.7390029325513, Blast_Score=118, Evalue=5e-27, Organism=Drosophila melanogaster, GI21357035, Length=341, Percent_Identity=28.7390029325513, Blast_Score=118, Evalue=5e-27, Organism=Drosophila melanogaster, GI24583858, Length=338, Percent_Identity=25.4437869822485, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI24585900, Length=147, Percent_Identity=34.6938775510204, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI24585898, Length=147, Percent_Identity=34.6938775510204, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI24585896, Length=147, Percent_Identity=34.6938775510204, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI19921672, Length=147, Percent_Identity=34.6938775510204, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI24645863, Length=127, Percent_Identity=34.6456692913386, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI24584409, Length=119, Percent_Identity=33.6134453781513, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI28574430, Length=119, Percent_Identity=33.6134453781513, Blast_Score=73, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 34926; Mature: 34795
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAPHVHQPKDSNSKRLLTAFLVTAVFMVAEVAGGLISGSLALLADAGHMLTDAAALLV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHH ALMAVHFSQRKPNARHTFGYLRLTTLAAFLNAAALLVIVVFILWEAIRRFFEPQPVMGTP HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH MLIIAIAGLLANLFAFWLLHRGSEEKNINVRAAALHVLGDLLGSVGAIAAAIVILTTGWT HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PIDPILSVLVSCLVIRSAWRLLKESFHELLEGTPQEVDINKLQKDLCLNIPEVRNIHHVH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHCCCEEE VWQIGEQKLMTLHAQVIPPHDHDGLLRRIQAYLLEHYRIGHVTIQMEYQHCDTPDCGINR EEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCC APEPSDHSHSHVGHHH CCCCCCCCCCCCCCCC >Mature Secondary Structure SDAPHVHQPKDSNSKRLLTAFLVTAVFMVAEVAGGLISGSLALLADAGHMLTDAAALLV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHH ALMAVHFSQRKPNARHTFGYLRLTTLAAFLNAAALLVIVVFILWEAIRRFFEPQPVMGTP HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH MLIIAIAGLLANLFAFWLLHRGSEEKNINVRAAALHVLGDLLGSVGAIAAAIVILTTGWT HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PIDPILSVLVSCLVIRSAWRLLKESFHELLEGTPQEVDINKLQKDLCLNIPEVRNIHHVH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHCCCEEE VWQIGEQKLMTLHAQVIPPHDHDGLLRRIQAYLLEHYRIGHVTIQMEYQHCDTPDCGINR EEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCC APEPSDHSHSHVGHHH CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]