| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is yxeP [H]
Identifier: 157369431
GI number: 157369431
Start: 1305690
End: 1306853
Strand: Reverse
Name: yxeP [H]
Synonym: Spro_1188
Alternate gene names: 157369431
Gene position: 1306853-1305690 (Counterclockwise)
Preceding gene: 157369433
Following gene: 157369430
Centisome position: 23.98
GC content: 61.0
Gene sequence:
>1164_bases ATGACCAGCCAACTGGCCGAAAAAATCGTCGCCTACCGCCGTGAACTGCATCAGAACCCTGAGCTGTCCAACCACGAATT TGCCACTACCGCCCGCCTGACCCGCTGGCTGGAAGAGGCCGGTATCCGTATTCTTCCGCTGGCGCTGAAGACCGGCGTGG TGGCTGAAATCGGCAGTGGCAAGGGGCCTGTCATTGCGCTGCGCGGGGATATTGACGCCCTGCCGATAGAAGAAATTTCT GGCGTGCCGTTCAGTTCGCAAAACAGTGGCGTGATGCACGCCTGCGGACATGATTTTCACACCTCGGTGATGCTGGGCGC GGCGCATTTGTTGAAAGCACGCGAAGCCACCCTGCCCGGCACGGTACGCATTTTCTTCCAGCCGGCGGAGGAAACCTTCA ACGGCGCCCAGCACCTGATCGACGCCGGAGCCCTGGATAACGTGGCGGCGGTATTCGGTCTGCACAACGCGCCGGAGCTG CCGACCGGTACCTTTGCCACCCGCGCCGGGGCGTTTTACGCCAACGTCGATCGCTTCCAGATCCTGATCACCGGCAAGGG GGCGCACGCCGCCAAACCGGAGCAAGGGGTGGACACCATCGTCACCGCCAGCCAGATTGTCAACGCGTTGCAAACCCTGC CCAGCCGCAGCTTCAGTTCGCTGGAGTCGTTGGTGGTGAGCGTCACGCGCATTGAGGGCGGTAACACCTGGAATGTTCTG CCACAGACCGTAGAGCTGGAGGGCACGGTCCGGACCCATAGCGATAAGGTTCGTCGCCAGGTACCGGATAAAATCCGCCA GGTGATTAACGGCGTCGCCGCATCCCTTGGCGCACAAGCGGAGCTACGCTGGCAGGCCGGCCCACCGGCGGTAGTCAATG ACGCACGCTGGGCAGCCTTCAGTAAAACCGTCGCCGCCGAAGCCGGTTACCGGGTGGAAGAGGCTGAGCTACAGATGGGC GGGGAAGACTTTGCACTGTATCTGCACCACGTGCCGGGCGTCTTTGTCAGTATTGGCTCGGCAAGTGAATTTGGTCTGCA TCACCCGCGCTTCAACCCGGATGAACAGGCGATTTTCCCGGCCTCGCAATATTTCGAACTGTTGGCTGAGCGCACGCTGC AGCAATTAGTCACCACACCGGAAAAAGCCACCAGCAAGGCATAG
Upstream 100 bases:
>100_bases GATGCAGACAAAATCGCTATGAAATATAACCAGATAGTCTTTTTGCTTCCGGCCGCCCTGCACTAGGGTTAGAGCTTACT AACCACTGTGAGCCAAGACT
Downstream 100 bases:
>100_bases AACTCCCCCGGTTATTATTCGCGGCGCGGTGTATTCTGCGCTGCGAGTTATTATTTCCTCCTCGGTTATATTTGCCAATT TCAACATTAGAATATGCTGT
Product: amidohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MTSQLAEKIVAYRRELHQNPELSNHEFATTARLTRWLEEAGIRILPLALKTGVVAEIGSGKGPVIALRGDIDALPIEEIS GVPFSSQNSGVMHACGHDFHTSVMLGAAHLLKAREATLPGTVRIFFQPAEETFNGAQHLIDAGALDNVAAVFGLHNAPEL PTGTFATRAGAFYANVDRFQILITGKGAHAAKPEQGVDTIVTASQIVNALQTLPSRSFSSLESLVVSVTRIEGGNTWNVL PQTVELEGTVRTHSDKVRRQVPDKIRQVINGVAASLGAQAELRWQAGPPAVVNDARWAAFSKTVAAEAGYRVEEAELQMG GEDFALYLHHVPGVFVSIGSASEFGLHHPRFNPDEQAIFPASQYFELLAERTLQQLVTTPEKATSKA
Sequences:
>Translated_387_residues MTSQLAEKIVAYRRELHQNPELSNHEFATTARLTRWLEEAGIRILPLALKTGVVAEIGSGKGPVIALRGDIDALPIEEIS GVPFSSQNSGVMHACGHDFHTSVMLGAAHLLKAREATLPGTVRIFFQPAEETFNGAQHLIDAGALDNVAAVFGLHNAPEL PTGTFATRAGAFYANVDRFQILITGKGAHAAKPEQGVDTIVTASQIVNALQTLPSRSFSSLESLVVSVTRIEGGNTWNVL PQTVELEGTVRTHSDKVRRQVPDKIRQVINGVAASLGAQAELRWQAGPPAVVNDARWAAFSKTVAAEAGYRVEEAELQMG GEDFALYLHHVPGVFVSIGSASEFGLHHPRFNPDEQAIFPASQYFELLAERTLQQLVTTPEKATSKA >Mature_386_residues TSQLAEKIVAYRRELHQNPELSNHEFATTARLTRWLEEAGIRILPLALKTGVVAEIGSGKGPVIALRGDIDALPIEEISG VPFSSQNSGVMHACGHDFHTSVMLGAAHLLKAREATLPGTVRIFFQPAEETFNGAQHLIDAGALDNVAAVFGLHNAPELP TGTFATRAGAFYANVDRFQILITGKGAHAAKPEQGVDTIVTASQIVNALQTLPSRSFSSLESLVVSVTRIEGGNTWNVLP QTVELEGTVRTHSDKVRRQVPDKIRQVINGVAASLGAQAELRWQAGPPAVVNDARWAAFSKTVAAEAGYRVEEAELQMGG EDFALYLHHVPGVFVSIGSASEFGLHHPRFNPDEQAIFPASQYFELLAERTLQQLVTTPEKATSKA
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=325, Percent_Identity=35.0769230769231, Blast_Score=139, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: NA
Molecular weight: Translated: 41689; Mature: 41557
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSQLAEKIVAYRRELHQNPELSNHEFATTARLTRWLEEAGIRILPLALKTGVVAEIGSG CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHCCCEEECCCC KGPVIALRGDIDALPIEEISGVPFSSQNSGVMHACGHDFHTSVMLGAAHLLKAREATLPG CCCEEEEECCCCCCCHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCC TVRIFFQPAEETFNGAQHLIDAGALDNVAAVFGLHNAPELPTGTFATRAGAFYANVDRFQ EEEEEEECCHHHHCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCEEECCCEEE ILITGKGAHAAKPEQGVDTIVTASQIVNALQTLPSRSFSSLESLVVSVTRIEGGNTWNVL EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCEECCC PQTVELEGTVRTHSDKVRRQVPDKIRQVINGVAASLGAQAELRWQAGPPAVVNDARWAAF CCEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCHHHHH SKTVAAEAGYRVEEAELQMGGEDFALYLHHVPGVFVSIGSASEFGLHHPRFNPDEQAIFP HHHHHHHCCCCEEHHHHHCCCCCEEEHEECCCCEEEEECCCCCCCCCCCCCCCCCCEECC ASQYFELLAERTLQQLVTTPEKATSKA HHHHHHHHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure TSQLAEKIVAYRRELHQNPELSNHEFATTARLTRWLEEAGIRILPLALKTGVVAEIGSG CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHCCCEEECCCC KGPVIALRGDIDALPIEEISGVPFSSQNSGVMHACGHDFHTSVMLGAAHLLKAREATLPG CCCEEEEECCCCCCCHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCC TVRIFFQPAEETFNGAQHLIDAGALDNVAAVFGLHNAPELPTGTFATRAGAFYANVDRFQ EEEEEEECCHHHHCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCEEECCCEEE ILITGKGAHAAKPEQGVDTIVTASQIVNALQTLPSRSFSSLESLVVSVTRIEGGNTWNVL EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCEECCC PQTVELEGTVRTHSDKVRRQVPDKIRQVINGVAASLGAQAELRWQAGPPAVVNDARWAAF CCEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCHHHHH SKTVAAEAGYRVEEAELQMGGEDFALYLHHVPGVFVSIGSASEFGLHHPRFNPDEQAIFP HHHHHHHCCCCEEHHHHHCCCCCEEEHEECCCCEEEEECCCCCCCCCCCCCCCCCCEECC ASQYFELLAERTLQQLVTTPEKATSKA HHHHHHHHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]