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The map label for this gene is ybbN [H]

Identifier: 157369398

GI number: 157369398

Start: 1271394

End: 1272278

Strand: Reverse

Name: ybbN [H]

Synonym: Spro_1155

Alternate gene names: 157369398

Gene position: 1272278-1271394 (Counterclockwise)

Preceding gene: 157369399

Following gene: 157369396

Centisome position: 23.35

GC content: 57.29

Gene sequence:

>885_bases
ATGGCTCCGCAAGATCAGAGAGAAAATTACATGCTAGCTCAAGCTGTTGTTGATATTAACGAAACAAACCTGCACCAGAC
GCTGGAACAGTCAATGTCCATGCCGGTGGTGTTCTACTTCTGGTCGGATCGCAGCCAACACTGTCTGCAACTCACCCCGA
TACTCGATAAGCTGGCGGCGGAATATGCCGGCCAGTTCCTGCTGGCAAAAGTGGATTGTGACGCCGAGCAGGCCATCGCC
GCTCAATTCGGCCTGCGCTCGCTGCCGACGGTATATCTGTTCAAAGACGGCCAGCCGGTCGACGGTTTCCAGGGCCCGCA
GCCGGAAGAGATGATCCGTGAATTCCTGCAGCGTTTCCTGCCGAAGGAAGAAGATCTGAAACTGGCGCAGGCGACCGAGC
TGTTGGCCGAAGGCAATGCGGCAGAAGCGCTGCCGCTGTTGAAAGACGCCTGGCAAGCGAGCCAGCAACGCAGTGATATC
GGTTTGACGCTGGCGGAAACCCAGATCGCGCTGAACCGCACTGAGGAGGCCGAAGCCGTGCTGGCGACTATTCCGTTGCA
GGATAAAGATACCCGTTATCAGGGCCTGCTGGCGCAGATTGAACTGTTGAAACAGGCCGCTGATACGCCGGAAATTCAGC
TGTTGCAACAGCAGGTGGATCAACAGCCGGAGAACGTCGATTTAGCCGTGCAGCTGGCGCTGCAACTGCATCAGGTTGGG
CGCAATGAAGAAGCGCTGGAGCTGTTGATCGGGCATCTGAAGAAAGATCTCGCCGCCGCCAACGGCAGCGCGCGTAAAAC
ATTGATGGATATTCTGGCCGCACTGGGCACCGGCGATGCGCTGGCCGCCAAATACCGCCGCCAGCTGTATTCGCTGTTGT
ACTGA

Upstream 100 bases:

>100_bases
GCATCCTGCCCGGCCGCTGTCTGGACTGGGTGTTACGCAGCAACGGTTAATTTGGCTGCCTGGGGTTGAAGAATGCCGTC
CCGCCCCCATCTAAAAGCCA

Downstream 100 bases:

>100_bases
TAGTTCGGGGCGTAGTCCGCTGCGCCCCTCCCTTCTCAACGGTAAACCCGTGCCCCACCTTCAACGCCTTTCGGGCTGAA
CAACACCTGCCACAGCTGAA

Product: thioredoxin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MAPQDQRENYMLAQAVVDINETNLHQTLEQSMSMPVVFYFWSDRSQHCLQLTPILDKLAAEYAGQFLLAKVDCDAEQAIA
AQFGLRSLPTVYLFKDGQPVDGFQGPQPEEMIREFLQRFLPKEEDLKLAQATELLAEGNAAEALPLLKDAWQASQQRSDI
GLTLAETQIALNRTEEAEAVLATIPLQDKDTRYQGLLAQIELLKQAADTPEIQLLQQQVDQQPENVDLAVQLALQLHQVG
RNEEALELLIGHLKKDLAAANGSARKTLMDILAALGTGDALAAKYRRQLYSLLY

Sequences:

>Translated_294_residues
MAPQDQRENYMLAQAVVDINETNLHQTLEQSMSMPVVFYFWSDRSQHCLQLTPILDKLAAEYAGQFLLAKVDCDAEQAIA
AQFGLRSLPTVYLFKDGQPVDGFQGPQPEEMIREFLQRFLPKEEDLKLAQATELLAEGNAAEALPLLKDAWQASQQRSDI
GLTLAETQIALNRTEEAEAVLATIPLQDKDTRYQGLLAQIELLKQAADTPEIQLLQQQVDQQPENVDLAVQLALQLHQVG
RNEEALELLIGHLKKDLAAANGSARKTLMDILAALGTGDALAAKYRRQLYSLLY
>Mature_293_residues
APQDQRENYMLAQAVVDINETNLHQTLEQSMSMPVVFYFWSDRSQHCLQLTPILDKLAAEYAGQFLLAKVDCDAEQAIAA
QFGLRSLPTVYLFKDGQPVDGFQGPQPEEMIREFLQRFLPKEEDLKLAQATELLAEGNAAEALPLLKDAWQASQQRSDIG
LTLAETQIALNRTEEAEAVLATIPLQDKDTRYQGLLAQIELLKQAADTPEIQLLQQQVDQQPENVDLAVQLALQLHQVGR
NEEALELLIGHLKKDLAAANGSARKTLMDILAALGTGDALAAKYRRQLYSLLY

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI87081747, Length=284, Percent_Identity=74.2957746478873, Blast_Score=434, Evalue=1e-123,
Organism=Escherichia coli, GI1788936, Length=104, Percent_Identity=34.6153846153846, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 32769; Mature: 32638

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPQDQRENYMLAQAVVDINETNLHQTLEQSMSMPVVFYFWSDRSQHCLQLTPILDKLAA
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHH
EYAGQFLLAKVDCDAEQAIAAQFGLRSLPTVYLFKDGQPVDGFQGPQPEEMIREFLQRFL
HHCCCEEEEEECCCHHHHHHHHHCHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHC
PKEEDLKLAQATELLAEGNAAEALPLLKDAWQASQQRSDIGLTLAETQIALNRTEEAEAV
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCHHHHHE
LATIPLQDKDTRYQGLLAQIELLKQAADTPEIQLLQQQVDQQPENVDLAVQLALQLHQVG
EEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
RNEEALELLIGHLKKDLAAANGSARKTLMDILAALGTGDALAAKYRRQLYSLLY
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
APQDQRENYMLAQAVVDINETNLHQTLEQSMSMPVVFYFWSDRSQHCLQLTPILDKLAA
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHH
EYAGQFLLAKVDCDAEQAIAAQFGLRSLPTVYLFKDGQPVDGFQGPQPEEMIREFLQRFL
HHCCCEEEEEECCCHHHHHHHHHCHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHC
PKEEDLKLAQATELLAEGNAAEALPLLKDAWQASQQRSDIGLTLAETQIALNRTEEAEAV
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCHHHHHE
LATIPLQDKDTRYQGLLAQIELLKQAADTPEIQLLQQQVDQQPENVDLAVQLALQLHQVG
EEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
RNEEALELLIGHLKKDLAAANGSARKTLMDILAALGTGDALAAKYRRQLYSLLY
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]