| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ybaL [H]
Identifier: 157369388
GI number: 157369388
Start: 1261048
End: 1262739
Strand: Reverse
Name: ybaL [H]
Synonym: Spro_1145
Alternate gene names: 157369388
Gene position: 1262739-1261048 (Counterclockwise)
Preceding gene: 157369389
Following gene: 157369375
Centisome position: 23.17
GC content: 56.62
Gene sequence:
>1692_bases ATGCATAATTCAACACCGCTAATCACCACCATTGTCGGAGGCTTGGTCCTCGCCTTCCTCCTCGGAATGCTGGCGAATCG CCTGCGCATCTCCCCGCTGGTCGGGTACCTTGCCGCAGGCGTGCTCGCCGGCCCTTTTACCCCCGGTTTTGTTGCCGACA CCTCGCTGGCTCCGGAACTGGCGGAAATCGGCGTGATTTTGTTGATGTTTGGTGTTGGCCTCCACTTCTCTCTTAAAGAC CTCCTCGCAGTAAAACATATCGCCATTCCCGGTGCCGTGGCCCAGATTGCCGTTGCCACCTTGCTGGGTATAGGGTTATC AAAACTGCTCGGCTGGGATTTGATTTCCGGTCTGGTGTTCGGGCTTTGCTTATCCACCGCCAGTACCGTGGTACTGCTGC GTGCGCTGGAAGAGCGTCAGTTGATTGATAGCCAGCGTGGGCAAATCGCCATCGGCTGGCTGATCGTAGAAGACCTGGCG ATGGTGCTGACGCTGGTATTGCTGCCGGCGTTCGGCAATATGCTGGGCAATAACAACGCCAGCAGCGGCCAGTTACTGAT TGAGTTGGCAGTGACCATTGGTAAAGTCATCGCCTTTATCGCGCTGATGATTGTGGTTGGTCGTCGCCTGGTGCCGTGGA TCCTGGCGAAAACCGCCAGTACCGGTTCACGTGAACTCTTTACCCTGGCGGTGTTGGCATTGGCACTCGGTATTGCCTAT GGCGCGGTGAAACTGTTCGATGTTTCCTTTGCCCTGGGGGCATTCTTTGCCGGTATGGTGCTCAATGAGTCTGAGCTGAG CCATCGAGCGGCCCACGACACCTTACCGCTGCGCGATGCCTTCGCCGTACTGTTCTTTGTCTCGGTCGGCATGCTGTTTG ATCCGATGATCCTGATCAATGAGCCTCTGGCGGTGCTGGCAACGCTGGCGATTATCGTATTCGGTAAATCGGCGGCCGCA TTCCTGCTGGTGAAAATGTTCGGCCACTCCAAACGCACCGCGCTGACCATCTCCGCCAGCCTGGCGCAGATTGGCGAGTT TGCCTTCATCCTGGCAGGGCTTGGGATCACGCTGGGCATGATGTCGGAGCACGGCCGTAATCTGGTGCTGGCCGGGGCTA TTTTGTCGATCATGCTTAACCCGCTGCTGTTCACCCTGCTCGAACGTTATCTGGCCAAGACCGAGACCATAGAAGACCAA ATCCTGGAAGAAGCGGTAGAGGACGAGAAGCAGATCCCGGTCGATATGTGCAACCACGCGTTGGTGGTTGGCTATGGCCG CGTAGGTAGTCTGCTTGGGGCCAAGCTGGCCGAAGCCGGTATTCCGCTGGTGGTAATCGAAAACTCACGGCCACGGGTTG AAGCATTGCGTGAACAGGGCATTAAAACGGTGCTGGGTAACGCCGCCAATCCGGAAGTGATGGATCTGGCACGGCTGGAC TGCGCACGCTGGCTGTTGTTGACCATCCCCAATGGTTACGAGGCCGGTGAGATCGTAGCCTCTGCGCGAACCAAGCGGCC CAACATCGAAATTATCGCCCGGGCGCACTACGATGACGAAGTATCCTATATCTCAGATCGTGGAGCGAATCAGGTGGTGA TGGGAGAACGGGAAATCGCCAACAGCATGCTGAATATCCTTAAGTTGGATACGCTGACTGAAGAAGAGAAAATGGGCGGC TGCCCGATTTGA
Upstream 100 bases:
>100_bases AGCTAAGCACGTCACGAACAAATGCAATAAACTAAATGTATCTTTTCGTAACTCTGTTGCGTTTCCCCTCTGCTGCAATG CATAGCTAGAAGGAGTCTGG
Downstream 100 bases:
>100_bases TGTGACAAGCGATGTAAAAAAGGTCCGGCGAGCCGGACCTTTTGCTTTTTACCGTTCCCAGTAAGACTCTTCCAGGCTGT CCTCTCGTTCCGGCAGGCCA
Product: putative cation:proton antiport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 563; Mature: 563
Protein sequence:
>563_residues MHNSTPLITTIVGGLVLAFLLGMLANRLRISPLVGYLAAGVLAGPFTPGFVADTSLAPELAEIGVILLMFGVGLHFSLKD LLAVKHIAIPGAVAQIAVATLLGIGLSKLLGWDLISGLVFGLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLA MVLTLVLLPAFGNMLGNNNASSGQLLIELAVTIGKVIAFIALMIVVGRRLVPWILAKTASTGSRELFTLAVLALALGIAY GAVKLFDVSFALGAFFAGMVLNESELSHRAAHDTLPLRDAFAVLFFVSVGMLFDPMILINEPLAVLATLAIIVFGKSAAA FLLVKMFGHSKRTALTISASLAQIGEFAFILAGLGITLGMMSEHGRNLVLAGAILSIMLNPLLFTLLERYLAKTETIEDQ ILEEAVEDEKQIPVDMCNHALVVGYGRVGSLLGAKLAEAGIPLVVIENSRPRVEALREQGIKTVLGNAANPEVMDLARLD CARWLLLTIPNGYEAGEIVASARTKRPNIEIIARAHYDDEVSYISDRGANQVVMGEREIANSMLNILKLDTLTEEEKMGG CPI
Sequences:
>Translated_563_residues MHNSTPLITTIVGGLVLAFLLGMLANRLRISPLVGYLAAGVLAGPFTPGFVADTSLAPELAEIGVILLMFGVGLHFSLKD LLAVKHIAIPGAVAQIAVATLLGIGLSKLLGWDLISGLVFGLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLA MVLTLVLLPAFGNMLGNNNASSGQLLIELAVTIGKVIAFIALMIVVGRRLVPWILAKTASTGSRELFTLAVLALALGIAY GAVKLFDVSFALGAFFAGMVLNESELSHRAAHDTLPLRDAFAVLFFVSVGMLFDPMILINEPLAVLATLAIIVFGKSAAA FLLVKMFGHSKRTALTISASLAQIGEFAFILAGLGITLGMMSEHGRNLVLAGAILSIMLNPLLFTLLERYLAKTETIEDQ ILEEAVEDEKQIPVDMCNHALVVGYGRVGSLLGAKLAEAGIPLVVIENSRPRVEALREQGIKTVLGNAANPEVMDLARLD CARWLLLTIPNGYEAGEIVASARTKRPNIEIIARAHYDDEVSYISDRGANQVVMGEREIANSMLNILKLDTLTEEEKMGG CPI >Mature_563_residues MHNSTPLITTIVGGLVLAFLLGMLANRLRISPLVGYLAAGVLAGPFTPGFVADTSLAPELAEIGVILLMFGVGLHFSLKD LLAVKHIAIPGAVAQIAVATLLGIGLSKLLGWDLISGLVFGLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLA MVLTLVLLPAFGNMLGNNNASSGQLLIELAVTIGKVIAFIALMIVVGRRLVPWILAKTASTGSRELFTLAVLALALGIAY GAVKLFDVSFALGAFFAGMVLNESELSHRAAHDTLPLRDAFAVLFFVSVGMLFDPMILINEPLAVLATLAIIVFGKSAAA FLLVKMFGHSKRTALTISASLAQIGEFAFILAGLGITLGMMSEHGRNLVLAGAILSIMLNPLLFTLLERYLAKTETIEDQ ILEEAVEDEKQIPVDMCNHALVVGYGRVGSLLGAKLAEAGIPLVVIENSRPRVEALREQGIKTVLGNAANPEVMDLARLD CARWLLLTIPNGYEAGEIVASARTKRPNIEIIARAHYDDEVSYISDRGANQVVMGEREIANSMLNILKLDTLTEEEKMGG CPI
Specific function: Unknown
COG id: COG4651
COG function: function code P; Kef-type K+ transport system, predicted NAD-binding component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=397, Percent_Identity=26.7002518891688, Blast_Score=95, Evalue=1e-19, Organism=Escherichia coli, GI1786685, Length=548, Percent_Identity=80.1094890510949, Blast_Score=854, Evalue=0.0, Organism=Escherichia coli, GI1789749, Length=525, Percent_Identity=28.7619047619048, Blast_Score=172, Evalue=7e-44, Organism=Escherichia coli, GI1786232, Length=528, Percent_Identity=28.4090909090909, Blast_Score=165, Evalue=8e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 59968; Mature: 59968
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNSTPLITTIVGGLVLAFLLGMLANRLRISPLVGYLAAGVLAGPFTPGFVADTSLAPEL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH AEIGVILLMFGVGLHFSLKDLLAVKHIAIPGAVAQIAVATLLGIGLSKLLGWDLISGLVF HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLAMVLTLVLLPAFGNMLGNNNA HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SSGQLLIELAVTIGKVIAFIALMIVVGRRLVPWILAKTASTGSRELFTLAVLALALGIAY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH GAVKLFDVSFALGAFFAGMVLNESELSHRAAHDTLPLRDAFAVLFFVSVGMLFDPMILIN HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHC EPLAVLATLAIIVFGKSAAAFLLVKMFGHSKRTALTISASLAQIGEFAFILAGLGITLGM CCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH MSEHGRNLVLAGAILSIMLNPLLFTLLERYLAKTETIEDQILEEAVEDEKQIPVDMCNHA HHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCE LVVGYGRVGSLLGAKLAEAGIPLVVIENSRPRVEALREQGIKTVLGNAANPEVMDLARLD EEEECHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCHHHHHCCCCCCHHHHHHHHH CARWLLLTIPNGYEAGEIVASARTKRPNIEIIARAHYDDEVSYISDRGANQVVMGEREIA HHHEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCCCCCEEECHHHHH NSMLNILKLDTLTEEEKMGGCPI HHHHHHHHHHHCCCHHHCCCCCC >Mature Secondary Structure MHNSTPLITTIVGGLVLAFLLGMLANRLRISPLVGYLAAGVLAGPFTPGFVADTSLAPEL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH AEIGVILLMFGVGLHFSLKDLLAVKHIAIPGAVAQIAVATLLGIGLSKLLGWDLISGLVF HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLAMVLTLVLLPAFGNMLGNNNA HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SSGQLLIELAVTIGKVIAFIALMIVVGRRLVPWILAKTASTGSRELFTLAVLALALGIAY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH GAVKLFDVSFALGAFFAGMVLNESELSHRAAHDTLPLRDAFAVLFFVSVGMLFDPMILIN HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHC EPLAVLATLAIIVFGKSAAAFLLVKMFGHSKRTALTISASLAQIGEFAFILAGLGITLGM CCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH MSEHGRNLVLAGAILSIMLNPLLFTLLERYLAKTETIEDQILEEAVEDEKQIPVDMCNHA HHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCE LVVGYGRVGSLLGAKLAEAGIPLVVIENSRPRVEALREQGIKTVLGNAANPEVMDLARLD EEEECHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCHHHHHCCCCCCHHHHHHHHH CARWLLLTIPNGYEAGEIVASARTKRPNIEIIARAHYDDEVSYISDRGANQVVMGEREIA HHHEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCCCCCEEECHHHHH NSMLNILKLDTLTEEEKMGGCPI HHHHHHHHHHHCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 7721718 [H]