| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is dctB [H]
Identifier: 157369309
GI number: 157369309
Start: 1172913
End: 1174670
Strand: Reverse
Name: dctB [H]
Synonym: Spro_1066
Alternate gene names: 157369309
Gene position: 1174670-1172913 (Counterclockwise)
Preceding gene: 157369313
Following gene: 157369308
Centisome position: 21.56
GC content: 59.61
Gene sequence:
>1758_bases GTGAAAAGAGCAGCGCTAATCTTGTTGCTGGGGGGTTGGTTAAACGTTGCCTGGGCGGGGCAATGGACCATCGCGGTGCT GGCGCTGCGCGGCGACGCGCATGCACTGGCCCAGTGGCAACCCTTGGTCGATCACCTTAATCGCCAGTTTCCCGGCGATC ACTTCCAACTGTCGCCGCTAAGCCTGGCCGGTATGGATGAGGCGGTCCGTAATGAACGCGTGGACTTTTTGCTCACCAAC CCGGCGCAATATGTCCAGTTGGATAACCGCTACCCGCTGCGCTGGCTGGTTTCGCTGCGTTCTTCCCAACAGCCGCAGCA GGCCTCAGGCAACGTGGTCGGCAGCGCCATACTGGTGCGCCACGACAGCCCAACCACTACGGCCAGCCAGTTAGTTGGTA AAAAGGTCGGTGCCGTCGCCGCGGACGCTTTTGGCGGCTACCTGCTGGGATATAAAGAACTGCTTGGCGCGGGCCTTGAC CCGGAGAAAGACTTGCAACTGCATTTCAGCGGTTACCCGGCGGATGCTCTGCTTTATCAGCTGCGCGATCGGGCGCTGGA TGCGGTGATTGTGCCGGTTTGCCTGCTGGAAAAAATGCAGGCGGAAGGGTTGCTGCAGGCCAGTGATTACCGCGCCCTGT TGGCAAAACACAGTGGCCAGCCCTGCCTGACCAGCACCGAGCTGTATCCCAACTGGTCATTTGCCGCCCTGAACCACGTC CCGGATCGGCTGGCAGATGAGTTAACCCGCCAGTTACTGCAGATGAACGCTCCCGGCCTGCCGGTTTGGGGTGCCCCGGC GTCATCCCGCCAGGTTAATCAGCTACTGCGCGATTTGAATATCCACCCAAGCCAACGCTCACTCTGGCAGGAGGTGACCC TTTGGGCACAGCAACACCTGCTGTTGCTCGGAGGCATCTTCGGGGGGATGCTGTTGCTCGGCGCTAACCACCTGTGGATC GGCCATCTGGTGCGCCGCCGCGGACGCCAACTCGAACAAATGCATCAGACACTGCGCGCCAGAGAAACTGCTCTGGCTCA GGCACAACGCCTCAGCACTCTGGGGGAGATGGCGTCCGGCTTTGCTCATGAGCTTAACCAGCCGCTGGCGGCGATCCGGC ACTATGCGGAGGGCTGCCGTATTCGTCTTGAGCGCAGCGATCGACAGCACGAGTTGCTGCCGATCCTCGAGCAGATTGGC CAGCAGGCGCAGCGTGGTGCGGAAAGCATTGTCAATTTGCGACGCTGGGCCAGCAAAACGCCGCACCATGAAAGCACACG CCCCCTGCTGTTGCGTCCGCTGGTGGAACACCTGATTAAACTGATGCAAATAGAACAACAGTATCCGCTGTGCCGCATAA CCCTGGCCATCCCGGCTCAAAGCCAGTTGTATAGCCAGACGACGTTGTTGGAGCAAGTGCTCACTAATTTGCTGAGTAAC AGCCTGCAAGCAGGTGCCCAACAAATCACTCTGCGGCTGGAAGTCGACCAACATCAGCAACGGTTGATCGTTGAGGACGA CGGCGGCGGCCTGAACGCCGAGCAGTTGACGCTGCCGTTCGTCCCGTTTCGCAGCAGCAAACCGGAAGGCCTCGGCTTGG GGCTGGTGATCTGCCAGCGGTTGCTGAAGCACCAGGGCGGCGATCTGACACTGGAAAACTATTTTTCCGCTTCTCAACAG CAAGGGTTGCGCGTGACCCTGTACTTCCCCGTGATCCAACAGGAAACCTGCCATGGCGTTAATACATCTGGTCGATGA
Upstream 100 bases:
>100_bases CAGCGACCGACCGCCAATATTGTGGTTTACCACATTCCCCACGGCGGCTTGATCCAGGACAATTCAACCCGGTGATACGG ATCATAAAAGTGGAGAAGAG
Downstream 100 bases:
>100_bases CGATTTAGCCGTTACCGACGCCTGCCGCTTTTTACTCGAGGGGCTGAACTATCGGGTGCAGATCTGGCACGACAGCCAAA AGTTCGTCGACCAGGTCAGT
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MKRAALILLLGGWLNVAWAGQWTIAVLALRGDAHALAQWQPLVDHLNRQFPGDHFQLSPLSLAGMDEAVRNERVDFLLTN PAQYVQLDNRYPLRWLVSLRSSQQPQQASGNVVGSAILVRHDSPTTTASQLVGKKVGAVAADAFGGYLLGYKELLGAGLD PEKDLQLHFSGYPADALLYQLRDRALDAVIVPVCLLEKMQAEGLLQASDYRALLAKHSGQPCLTSTELYPNWSFAALNHV PDRLADELTRQLLQMNAPGLPVWGAPASSRQVNQLLRDLNIHPSQRSLWQEVTLWAQQHLLLLGGIFGGMLLLGANHLWI GHLVRRRGRQLEQMHQTLRARETALAQAQRLSTLGEMASGFAHELNQPLAAIRHYAEGCRIRLERSDRQHELLPILEQIG QQAQRGAESIVNLRRWASKTPHHESTRPLLLRPLVEHLIKLMQIEQQYPLCRITLAIPAQSQLYSQTTLLEQVLTNLLSN SLQAGAQQITLRLEVDQHQQRLIVEDDGGGLNAEQLTLPFVPFRSSKPEGLGLGLVICQRLLKHQGGDLTLENYFSASQQ QGLRVTLYFPVIQQETCHGVNTSGR
Sequences:
>Translated_585_residues MKRAALILLLGGWLNVAWAGQWTIAVLALRGDAHALAQWQPLVDHLNRQFPGDHFQLSPLSLAGMDEAVRNERVDFLLTN PAQYVQLDNRYPLRWLVSLRSSQQPQQASGNVVGSAILVRHDSPTTTASQLVGKKVGAVAADAFGGYLLGYKELLGAGLD PEKDLQLHFSGYPADALLYQLRDRALDAVIVPVCLLEKMQAEGLLQASDYRALLAKHSGQPCLTSTELYPNWSFAALNHV PDRLADELTRQLLQMNAPGLPVWGAPASSRQVNQLLRDLNIHPSQRSLWQEVTLWAQQHLLLLGGIFGGMLLLGANHLWI GHLVRRRGRQLEQMHQTLRARETALAQAQRLSTLGEMASGFAHELNQPLAAIRHYAEGCRIRLERSDRQHELLPILEQIG QQAQRGAESIVNLRRWASKTPHHESTRPLLLRPLVEHLIKLMQIEQQYPLCRITLAIPAQSQLYSQTTLLEQVLTNLLSN SLQAGAQQITLRLEVDQHQQRLIVEDDGGGLNAEQLTLPFVPFRSSKPEGLGLGLVICQRLLKHQGGDLTLENYFSASQQ QGLRVTLYFPVIQQETCHGVNTSGR >Mature_585_residues MKRAALILLLGGWLNVAWAGQWTIAVLALRGDAHALAQWQPLVDHLNRQFPGDHFQLSPLSLAGMDEAVRNERVDFLLTN PAQYVQLDNRYPLRWLVSLRSSQQPQQASGNVVGSAILVRHDSPTTTASQLVGKKVGAVAADAFGGYLLGYKELLGAGLD PEKDLQLHFSGYPADALLYQLRDRALDAVIVPVCLLEKMQAEGLLQASDYRALLAKHSGQPCLTSTELYPNWSFAALNHV PDRLADELTRQLLQMNAPGLPVWGAPASSRQVNQLLRDLNIHPSQRSLWQEVTLWAQQHLLLLGGIFGGMLLLGANHLWI GHLVRRRGRQLEQMHQTLRARETALAQAQRLSTLGEMASGFAHELNQPLAAIRHYAEGCRIRLERSDRQHELLPILEQIG QQAQRGAESIVNLRRWASKTPHHESTRPLLLRPLVEHLIKLMQIEQQYPLCRITLAIPAQSQLYSQTTLLEQVLTNLLSN SLQAGAQQITLRLEVDQHQQRLIVEDDGGGLNAEQLTLPFVPFRSSKPEGLGLGLVICQRLLKHQGGDLTLENYFSASQQ QGLRVTLYFPVIQQETCHGVNTSGR
Specific function: Member of the two-component regulatory system dctB/dctD involved in the transport of C4-dicarboxylates. DctB functions as a membrane-associated protein kinase that phosphorylates dctD in response to environmental signals [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788549, Length=209, Percent_Identity=32.0574162679426, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1790436, Length=243, Percent_Identity=27.1604938271605, Blast_Score=83, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR017055 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 65182; Mature: 65182
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRAALILLLGGWLNVAWAGQWTIAVLALRGDAHALAQWQPLVDHLNRQFPGDHFQLSPL CCCEEEEEEECCCCCEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEECCC SLAGMDEAVRNERVDFLLTNPAQYVQLDNRYPLRWLVSLRSSQQPQQASGNVVGSAILVR HHCCCHHHHHCCCCCEEEECCHHHEEECCCCCHHHHHHHHCCCCCCHHCCCEEEEEEEEE HDSPTTTASQLVGKKVGAVAADAFGGYLLGYKELLGAGLDPEKDLQLHFSGYPADALLYQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHH LRDRALDAVIVPVCLLEKMQAEGLLQASDYRALLAKHSGQPCLTSTELYPNWSFAALNHV HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHC PDRLADELTRQLLQMNAPGLPVWGAPASSRQVNQLLRDLNIHPSQRSLWQEVTLWAQQHL HHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LLLGGIFGGMLLLGANHLWIGHLVRRRGRQLEQMHQTLRARETALAQAQRLSTLGEMASG HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAHELNQPLAAIRHYAEGCRIRLERSDRQHELLPILEQIGQQAQRGAESIVNLRRWASKT HHHHHCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PHHESTRPLLLRPLVEHLIKLMQIEQQYPLCRITLAIPAQSQLYSQTTLLEQVLTNLLSN CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH SLQAGAQQITLRLEVDQHQQRLIVEDDGGGLNAEQLTLPFVPFRSSKPEGLGLGLVICQR HHHCCCEEEEEEEEECCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHH LLKHQGGDLTLENYFSASQQQGLRVTLYFPVIQQETCHGVNTSGR HHHCCCCCEEHHHHHCHHHHCCCEEEEEEEEHHHHHCCCCCCCCC >Mature Secondary Structure MKRAALILLLGGWLNVAWAGQWTIAVLALRGDAHALAQWQPLVDHLNRQFPGDHFQLSPL CCCEEEEEEECCCCCEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEECCC SLAGMDEAVRNERVDFLLTNPAQYVQLDNRYPLRWLVSLRSSQQPQQASGNVVGSAILVR HHCCCHHHHHCCCCCEEEECCHHHEEECCCCCHHHHHHHHCCCCCCHHCCCEEEEEEEEE HDSPTTTASQLVGKKVGAVAADAFGGYLLGYKELLGAGLDPEKDLQLHFSGYPADALLYQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHH LRDRALDAVIVPVCLLEKMQAEGLLQASDYRALLAKHSGQPCLTSTELYPNWSFAALNHV HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHC PDRLADELTRQLLQMNAPGLPVWGAPASSRQVNQLLRDLNIHPSQRSLWQEVTLWAQQHL HHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LLLGGIFGGMLLLGANHLWIGHLVRRRGRQLEQMHQTLRARETALAQAQRLSTLGEMASG HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAHELNQPLAAIRHYAEGCRIRLERSDRQHELLPILEQIGQQAQRGAESIVNLRRWASKT HHHHHCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PHHESTRPLLLRPLVEHLIKLMQIEQQYPLCRITLAIPAQSQLYSQTTLLEQVLTNLLSN CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH SLQAGAQQITLRLEVDQHQQRLIVEDDGGGLNAEQLTLPFVPFRSSKPEGLGLGLVICQR HHHCCCEEEEEEEEECCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHH LLKHQGGDLTLENYFSASQQQGLRVTLYFPVIQQETCHGVNTSGR HHHCCCCCEEHHHHHCHHHHCCCEEEEEEEEHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2134335; 2793824; 11481431; 2551890; 2695394 [H]