| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yaiW [H]
Identifier: 157369231
GI number: 157369231
Start: 1092532
End: 1093635
Strand: Direct
Name: yaiW [H]
Synonym: Spro_0988
Alternate gene names: 157369231
Gene position: 1092532-1093635 (Clockwise)
Preceding gene: 157369227
Following gene: 157369234
Centisome position: 20.05
GC content: 58.97
Gene sequence:
>1104_bases ATGCTAATTCGCCATTTTATCAAGCCATTGAGCCTGGGCGCACTGTTGGTGCTGGCCGGTTGTAGCACCAAAACCACGAC CACTACGCCGGTGCAACGTCCGGCAGACGTCAAAGCCCAACTGGTGCGGTTAATGCCGGCCAACACCGCAGACCGTCAGG GGTGGGCCACCGATATCACCGCCGCTTTTGCCGCGCAGGGCATTGAACCCAGCGACCAGAACCTGTGTTCGGTGCTGGCC GTCACCGAGCAGGAGTCGACCTTCCAGGCCAACCCGTCAGTGCCAGGGCTGCCAAAGATCGCCTGGAAAGAGATCGACCG CCGCGCCGACCAGCTGCATATTCCCAACTTCCTGGTGCATACCGCCCTGATGATTAAATCACCAAACGGCAAGAGCTACA GCGAGCGGCTCGATAAGGTGCGCACCGAGAAAGATCTGAGCGATATCTTTGATGACATGATTAATTCGGTGCCGATGGGG CAAAAACTGTTTGGCAGCCTCAATCCGGTGCATACCGCCGGGCCGATGCAGGTGAGTATTGCCTTCGCCGAAGCCCATGC CAAAGGCTATCCATACCCGATTGACGGCACCATCCGCCGCGAAGTCTTTAGCCGCCGTGGCGGCATGTATTTCGGTATCG CTCACCTGTTGGGCTATCCGGCCAACTATAGCCAACCGATTTACCGCTTTGCCGACTTCAATGCCGGTTGGTACGCCAGC CGCAATGCGGCCTTCCAGAGCGCAGTCAGCCGCACGTCGGGCATTCCGTTGGCGCTGGACGGCGACTTGATTAACTACGG TACCGATAAGCCGGGCACCACCGAACTGGCGGTACGCACCCTCGGCAAGCGGTTGGACATGAGCGACTCGTCGATTCGTC GGGCGCTGGAGAAGGGCGATTTGCCTGAGTTTGCCGACACCGATCTGTATGAGCGAGTCTATGCCCTGGCGGAGAAATCC ACCGGCAAGAAACTGCCACGGGAAATGCTGCCGGGCATTCAACTGGAAAGCCCGAAAATTACCCGTAAGTTGACCACCGC CTGGTTTGCCAAACGGGTGGATGAGCGGCGCCAACGTTGCATGACCCGCGCCTCGGCGGGTTAA
Upstream 100 bases:
>100_bases TTCCTGGTGGCCGTACGAGAGGATTGGCATATTTAAACTGGATCACGGTCCCAGCCTGGGCTAACGTCAGTGCAGTTTAT GCTAAAAGATCAGGGAAAAG
Downstream 100 bases:
>100_bases ACCTGTGGGGTGCTGATAAATGCAGGATGCCGCTCGGCCTGGGCGGCAAATGCCGCCAGCGTCGGATGGTTATCGGCGCT AATCAATTCGGGCAACATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MLIRHFIKPLSLGALLVLAGCSTKTTTTTPVQRPADVKAQLVRLMPANTADRQGWATDITAAFAAQGIEPSDQNLCSVLA VTEQESTFQANPSVPGLPKIAWKEIDRRADQLHIPNFLVHTALMIKSPNGKSYSERLDKVRTEKDLSDIFDDMINSVPMG QKLFGSLNPVHTAGPMQVSIAFAEAHAKGYPYPIDGTIRREVFSRRGGMYFGIAHLLGYPANYSQPIYRFADFNAGWYAS RNAAFQSAVSRTSGIPLALDGDLINYGTDKPGTTELAVRTLGKRLDMSDSSIRRALEKGDLPEFADTDLYERVYALAEKS TGKKLPREMLPGIQLESPKITRKLTTAWFAKRVDERRQRCMTRASAG
Sequences:
>Translated_367_residues MLIRHFIKPLSLGALLVLAGCSTKTTTTTPVQRPADVKAQLVRLMPANTADRQGWATDITAAFAAQGIEPSDQNLCSVLA VTEQESTFQANPSVPGLPKIAWKEIDRRADQLHIPNFLVHTALMIKSPNGKSYSERLDKVRTEKDLSDIFDDMINSVPMG QKLFGSLNPVHTAGPMQVSIAFAEAHAKGYPYPIDGTIRREVFSRRGGMYFGIAHLLGYPANYSQPIYRFADFNAGWYAS RNAAFQSAVSRTSGIPLALDGDLINYGTDKPGTTELAVRTLGKRLDMSDSSIRRALEKGDLPEFADTDLYERVYALAEKS TGKKLPREMLPGIQLESPKITRKLTTAWFAKRVDERRQRCMTRASAG >Mature_367_residues MLIRHFIKPLSLGALLVLAGCSTKTTTTTPVQRPADVKAQLVRLMPANTADRQGWATDITAAFAAQGIEPSDQNLCSVLA VTEQESTFQANPSVPGLPKIAWKEIDRRADQLHIPNFLVHTALMIKSPNGKSYSERLDKVRTEKDLSDIFDDMINSVPMG QKLFGSLNPVHTAGPMQVSIAFAEAHAKGYPYPIDGTIRREVFSRRGGMYFGIAHLLGYPANYSQPIYRFADFNAGWYAS RNAAFQSAVSRTSGIPLALDGDLINYGTDKPGTTELAVRTLGKRLDMSDSSIRRALEKGDLPEFADTDLYERVYALAEKS TGKKLPREMLPGIQLESPKITRKLTTAWFAKRVDERRQRCMTRASAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786576, Length=345, Percent_Identity=68.4057971014493, Blast_Score=501, Evalue=1e-143,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011673 - ProDom: PD041438 [H]
Pfam domain/function: PF07759 DUF1615 [H]
EC number: NA
Molecular weight: Translated: 40524; Mature: 40524
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIRHFIKPLSLGALLVLAGCSTKTTTTTPVQRPADVKAQLVRLMPANTADRQGWATDIT CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHH AAFAAQGIEPSDQNLCSVLAVTEQESTFQANPSVPGLPKIAWKEIDRRADQLHIPNFLVH HHHHHCCCCCCHHHHHHHHEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHH TALMIKSPNGKSYSERLDKVRTEKDLSDIFDDMINSVPMGQKLFGSLNPVHTAGPMQVSI HHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEEE AFAEAHAKGYPYPIDGTIRREVFSRRGGMYFGIAHLLGYPANYSQPIYRFADFNAGWYAS EEEHHHCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHCCCCCCCCCHHHHHCCCCCCCCC RNAAFQSAVSRTSGIPLALDGDLINYGTDKPGTTELAVRTLGKRLDMSDSSIRRALEKGD CHHHHHHHHHHHCCCCEEECCCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCC LPEFADTDLYERVYALAEKSTGKKLPREMLPGIQLESPKITRKLTTAWFAKRVDERRQRC CCCCCCHHHHHHHHHHHHHHCHHCCCHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHH MTRASAG HHHHCCC >Mature Secondary Structure MLIRHFIKPLSLGALLVLAGCSTKTTTTTPVQRPADVKAQLVRLMPANTADRQGWATDIT CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHH AAFAAQGIEPSDQNLCSVLAVTEQESTFQANPSVPGLPKIAWKEIDRRADQLHIPNFLVH HHHHHCCCCCCHHHHHHHHEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHH TALMIKSPNGKSYSERLDKVRTEKDLSDIFDDMINSVPMGQKLFGSLNPVHTAGPMQVSI HHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEEE AFAEAHAKGYPYPIDGTIRREVFSRRGGMYFGIAHLLGYPANYSQPIYRFADFNAGWYAS EEEHHHCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHCCCCCCCCCHHHHHCCCCCCCCC RNAAFQSAVSRTSGIPLALDGDLINYGTDKPGTTELAVRTLGKRLDMSDSSIRRALEKGD CHHHHHHHHHHHCCCCEEECCCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCC LPEFADTDLYERVYALAEKSTGKKLPREMLPGIQLESPKITRKLTTAWFAKRVDERRQRC CCCCCCHHHHHHHHHHHHHHCHHCCCHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHH MTRASAG HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]