Click here to switch to the map view.

The map label for this gene is viuA [H]

Identifier: 157369220

GI number: 157369220

Start: 1078899

End: 1081022

Strand: Direct

Name: viuA [H]

Synonym: Spro_0977

Alternate gene names: 157369220

Gene position: 1078899-1081022 (Clockwise)

Preceding gene: 157369219

Following gene: 157369221

Centisome position: 19.8

GC content: 58.66

Gene sequence:

>2124_bases
ATGAGCAAGCATTCAGCGGCTCAAAGGCATAAAATCGTAGGAAACAAGGAAAAAGCAGGCTTACAGGTCATCGGGGCATT
TTCCTCACTCTTTCTGGGTCTTTGCTCTCTGTCTGTCGGCAGCGTTAACGCCGCCGCCGTGGACGAGAAGGTTCAGGAAA
CCGCAGACAGCAAACGTAACGACAACTGGCAGGACTCCGAGAGCCTGCTGGTCACCGGCGAAAAAATCAAACGCAGCATT
TTTGATACCGGCTCCAGCGTGCAAGTGTTCGACAGCGAACGCATTGCCTCTATGCCCAATGCGTTGCAGGTCCCTGATTT
ACTGAGGATGACTGCCAACGTCATGGATGTGGGCATCGGTAACGACCTTCCGACCGTGCGCGGTATCGATGGCTCCGGCC
CGAATACCGGTGCCAATGCCTTCCTCAGCGGCACCCGCCCACGTCTCAATCTGTCATTGGATGGGCGTTCATTAACCTAT
AACGAGCAGGCCTACGGCCCGCAGTCGCTGTGGGATCTGGATCGCGTAGAAGTCTTCCTCGGGCCGCAGAGCTATATTCA
GGGGCGCAACGCCATTGCCGGCGCCATCGTGATGGCCAGTAAGGATCCGACCTTTGACTGGGAAAGCGCCTTCAAGGGGG
GCGCGGGAAACCAGCATTCTTCACAACTGTCCGCCATGGTCTCCGGCCCGCTGGTGGAAGACCAACTGGCGTTCCGCGTC
AGCGTCGATCGTCAGCGCCGCCGTAGTGACGTCGACCTGCCCGCCTATGAACCGGTGGGCGATCCGCGCGAGGTTGAAGC
CACTACCGCCCGTGCCAAACTGTTGTTCAACCCGGCAGGCATGCGCGAGTTGACCACCAAGCTGACCTTTAACCATTTTG
GCAGCACCTCACCGCAAAACGAGAGCCTCAACCCGTTGGTTCACCCGACCAGCCTGCGTCACGATCCGCGCCGTGCGGTA
TTTAAAAGCAACACCAACAGCGGCGTCTGGGATCTGGCCTGGGAGCAATCCGACAGCCTGACGCTGGAAAACCGGGTGAT
CTACACCGACTTCAATATCAACCGTCCTACCGCTTATGCCTTGCCGTACGCCGATATCGGCGGCAAAGAGGTGCATGTGG
AGCCGGTGGCGCGCTTTGGCGGGCCAGGCAGCCGCCTGCACGGGCTGGCGGGGTTGCGTTACTTCCACGCCAAGCAGGAT
GAGTTCGTTAACATTTTCGGTGGTTCCACCTTCAAGGATAAAACCGACACCAATTCGGTGTTTGCCGAACTGACCTATGC
CATCACGCCACAGGTGGACCTTACCGCCGCCAGCCGCCTGGAGCGAGAGCACCGTCAGCGTACCGGCGGCAGCAAGGCCG
TACGTATAGACTTCGACGAAACCTACGACGTGTTCCTGCCGAAGCTGGATCTGGCCTGGAAACCGACGGATACCCAGACC
TACGGCGCCAAGGTGGCGCGTGGTTATAACGCCGGTGGCGCGGGCATCACTATCGGCACGCCGGTGGTCAACTACACCTA
CGGTTCCGAGTATGTCTGGAACTATGAGCTCTACACTCGTCACCACCTGAAAGACGCCAACGTCATTCTGACCAGCAATA
TTTTCTACAACGACTACAAAGACATGCAGTTGCCGTACTCCCTGGGGCCAAACTCATCGGTGATCCGCAATGCCGACAAG
GTGGAAACCTACGGTGCGGAGATGGGGGCGACCTGGCAGCCGCGCTGGGACTTCGAGCTGTTCACTAACGTTGGCCTGTT
GAAGACCAAAATCAAGAAGTTCTCGGGCAGCGGCGTCGATGGGCACGAACTGGCGCGTGCGCCGGCTTATACCGCCAACA
TGGGCGCCAAGTACCAACTGATGGCCGGGTTGGAACTGAGCGGCAACGTGGCGTTCTCGGACTCCTACTACTCGCAGTAC
GACAACGACTCACGCGGGCGCATCGGTTCTTACTGGTCGGCGAATACCCAACTGGCGTACACCTTCGCCTATGGGCGCGC
CACCCTGTATGCACAGAACCTGTTTGACTCTGAGCGTCGCGTGATGGTCAGCGGCAACGACGTGTACACGGCGACTCAAC
AGCGCCCGCGCATGATTGGCGCGGCACTTGAACTGACATTCTGA

Upstream 100 bases:

>100_bases
AGGAAGGCCGCAATGCCATTGTCAGTGTGAAAAGCAGCGTCGTTACCTATGTGAAAACAATTAAATTTTTGTGCATCTGG
GATGAAAGGAGAATACATCT

Downstream 100 bases:

>100_bases
TGCGGTAGCAGCCAGTCTGCACAAGGGGCGTACCAACGCCCCTTTTCATGACTCGCGTTCCCCGATGTTCCGGCGTGGCC
GGGCGCAAGGAGATAGAGCA

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 707; Mature: 706

Protein sequence:

>707_residues
MSKHSAAQRHKIVGNKEKAGLQVIGAFSSLFLGLCSLSVGSVNAAAVDEKVQETADSKRNDNWQDSESLLVTGEKIKRSI
FDTGSSVQVFDSERIASMPNALQVPDLLRMTANVMDVGIGNDLPTVRGIDGSGPNTGANAFLSGTRPRLNLSLDGRSLTY
NEQAYGPQSLWDLDRVEVFLGPQSYIQGRNAIAGAIVMASKDPTFDWESAFKGGAGNQHSSQLSAMVSGPLVEDQLAFRV
SVDRQRRRSDVDLPAYEPVGDPREVEATTARAKLLFNPAGMRELTTKLTFNHFGSTSPQNESLNPLVHPTSLRHDPRRAV
FKSNTNSGVWDLAWEQSDSLTLENRVIYTDFNINRPTAYALPYADIGGKEVHVEPVARFGGPGSRLHGLAGLRYFHAKQD
EFVNIFGGSTFKDKTDTNSVFAELTYAITPQVDLTAASRLEREHRQRTGGSKAVRIDFDETYDVFLPKLDLAWKPTDTQT
YGAKVARGYNAGGAGITIGTPVVNYTYGSEYVWNYELYTRHHLKDANVILTSNIFYNDYKDMQLPYSLGPNSSVIRNADK
VETYGAEMGATWQPRWDFELFTNVGLLKTKIKKFSGSGVDGHELARAPAYTANMGAKYQLMAGLELSGNVAFSDSYYSQY
DNDSRGRIGSYWSANTQLAYTFAYGRATLYAQNLFDSERRVMVSGNDVYTATQQRPRMIGAALELTF

Sequences:

>Translated_707_residues
MSKHSAAQRHKIVGNKEKAGLQVIGAFSSLFLGLCSLSVGSVNAAAVDEKVQETADSKRNDNWQDSESLLVTGEKIKRSI
FDTGSSVQVFDSERIASMPNALQVPDLLRMTANVMDVGIGNDLPTVRGIDGSGPNTGANAFLSGTRPRLNLSLDGRSLTY
NEQAYGPQSLWDLDRVEVFLGPQSYIQGRNAIAGAIVMASKDPTFDWESAFKGGAGNQHSSQLSAMVSGPLVEDQLAFRV
SVDRQRRRSDVDLPAYEPVGDPREVEATTARAKLLFNPAGMRELTTKLTFNHFGSTSPQNESLNPLVHPTSLRHDPRRAV
FKSNTNSGVWDLAWEQSDSLTLENRVIYTDFNINRPTAYALPYADIGGKEVHVEPVARFGGPGSRLHGLAGLRYFHAKQD
EFVNIFGGSTFKDKTDTNSVFAELTYAITPQVDLTAASRLEREHRQRTGGSKAVRIDFDETYDVFLPKLDLAWKPTDTQT
YGAKVARGYNAGGAGITIGTPVVNYTYGSEYVWNYELYTRHHLKDANVILTSNIFYNDYKDMQLPYSLGPNSSVIRNADK
VETYGAEMGATWQPRWDFELFTNVGLLKTKIKKFSGSGVDGHELARAPAYTANMGAKYQLMAGLELSGNVAFSDSYYSQY
DNDSRGRIGSYWSANTQLAYTFAYGRATLYAQNLFDSERRVMVSGNDVYTATQQRPRMIGAALELTF
>Mature_706_residues
SKHSAAQRHKIVGNKEKAGLQVIGAFSSLFLGLCSLSVGSVNAAAVDEKVQETADSKRNDNWQDSESLLVTGEKIKRSIF
DTGSSVQVFDSERIASMPNALQVPDLLRMTANVMDVGIGNDLPTVRGIDGSGPNTGANAFLSGTRPRLNLSLDGRSLTYN
EQAYGPQSLWDLDRVEVFLGPQSYIQGRNAIAGAIVMASKDPTFDWESAFKGGAGNQHSSQLSAMVSGPLVEDQLAFRVS
VDRQRRRSDVDLPAYEPVGDPREVEATTARAKLLFNPAGMRELTTKLTFNHFGSTSPQNESLNPLVHPTSLRHDPRRAVF
KSNTNSGVWDLAWEQSDSLTLENRVIYTDFNINRPTAYALPYADIGGKEVHVEPVARFGGPGSRLHGLAGLRYFHAKQDE
FVNIFGGSTFKDKTDTNSVFAELTYAITPQVDLTAASRLEREHRQRTGGSKAVRIDFDETYDVFLPKLDLAWKPTDTQTY
GAKVARGYNAGGAGITIGTPVVNYTYGSEYVWNYELYTRHHLKDANVILTSNIFYNDYKDMQLPYSLGPNSSVIRNADKV
ETYGAEMGATWQPRWDFELFTNVGLLKTKIKKFSGSGVDGHELARAPAYTANMGAKYQLMAGLELSGNVAFSDSYYSQYD
NDSRGRIGSYWSANTQLAYTFAYGRATLYAQNLFDSERRVMVSGNDVYTATQQRPRMIGAALELTF

Specific function: Receptor for ferric vibriobactin [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug [H]

EC number: NA

Molecular weight: Translated: 77965; Mature: 77834

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS00430 TONB_DEPENDENT_REC_1 ; PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKHSAAQRHKIVGNKEKAGLQVIGAFSSLFLGLCSLSVGSVNAAAVDEKVQETADSKRN
CCCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
DNWQDSESLLVTGEKIKRSIFDTGSSVQVFDSERIASMPNALQVPDLLRMTANVMDVGIG
CCCCCCCCEEEEHHHHHHHHHCCCCCEEEECCHHHHCCCCCCCCHHHHHHHHHHHEECCC
NDLPTVRGIDGSGPNTGANAFLSGTRPRLNLSLDGRSLTYNEQAYGPQSLWDLDRVEVFL
CCCCCEECCCCCCCCCCCCEEECCCCCEEEEEECCCEEEECCCCCCCHHHCCCCCEEEEE
GPQSYIQGRNAIAGAIVMASKDPTFDWESAFKGGAGNQHSSQLSAMVSGPLVEDQLAFRV
CCHHHHCCCCCEEEEEEEECCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEEEE
SVDRQRRRSDVDLPAYEPVGDPREVEATTARAKLLFNPAGMRELTTKLTFNHFGSTSPQN
ECCHHHHCCCCCCCCCCCCCCCCHHHHHHHEEEEEECCCCHHHHHHHHEEHHCCCCCCCC
ESLNPLVHPTSLRHDPRRAVFKSNTNSGVWDLAWEQSDSLTLENRVIYTDFNINRPTAYA
CCCCCCCCCCCCCCCCHHHHEECCCCCCEEEEEECCCCCEEECCEEEEEECCCCCCEEEE
LPYADIGGKEVHVEPVARFGGPGSRLHGLAGLRYFHAKQDEFVNIFGGSTFKDKTDTNSV
CCCCCCCCCEEEEEHHHHCCCCCHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCCCCE
FAELTYAITPQVDLTAASRLEREHRQRTGGSKAVRIDFDETYDVFLPKLDLAWKPTDTQT
EEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCEEECCCCCCH
YGAKVARGYNAGGAGITIGTPVVNYTYGSEYVWNYELYTRHHLKDANVILTSNIFYNDYK
HHHHHHCCCCCCCCCEEECCCEEEEECCCCEEEEEEEEEEECCCCCCEEEEECEEECCCC
DMQLPYSLGPNSSVIRNADKVETYGAEMGATWQPRWDFELFTNVGLLKTKIKKFSGSGVD
CCCCCCCCCCCCHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCC
GHELARAPAYTANMGAKYQLMAGLELSGNVAFSDSYYSQYDNDSRGRIGSYWSANTQLAY
HHHHHCCCCCCCCCCCEEEEEEEEEECCCEEECCCHHHHCCCCCCCCCCCEECCCCEEEE
TFAYGRATLYAQNLFDSERRVMVSGNDVYTATQQRPRMIGAALELTF
EEEECCEEEEEHHHCCCCCEEEEECCEEEECCCCCCCEEEEEEEECC
>Mature Secondary Structure 
SKHSAAQRHKIVGNKEKAGLQVIGAFSSLFLGLCSLSVGSVNAAAVDEKVQETADSKRN
CCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
DNWQDSESLLVTGEKIKRSIFDTGSSVQVFDSERIASMPNALQVPDLLRMTANVMDVGIG
CCCCCCCCEEEEHHHHHHHHHCCCCCEEEECCHHHHCCCCCCCCHHHHHHHHHHHEECCC
NDLPTVRGIDGSGPNTGANAFLSGTRPRLNLSLDGRSLTYNEQAYGPQSLWDLDRVEVFL
CCCCCEECCCCCCCCCCCCEEECCCCCEEEEEECCCEEEECCCCCCCHHHCCCCCEEEEE
GPQSYIQGRNAIAGAIVMASKDPTFDWESAFKGGAGNQHSSQLSAMVSGPLVEDQLAFRV
CCHHHHCCCCCEEEEEEEECCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEEEE
SVDRQRRRSDVDLPAYEPVGDPREVEATTARAKLLFNPAGMRELTTKLTFNHFGSTSPQN
ECCHHHHCCCCCCCCCCCCCCCCHHHHHHHEEEEEECCCCHHHHHHHHEEHHCCCCCCCC
ESLNPLVHPTSLRHDPRRAVFKSNTNSGVWDLAWEQSDSLTLENRVIYTDFNINRPTAYA
CCCCCCCCCCCCCCCCHHHHEECCCCCCEEEEEECCCCCEEECCEEEEEECCCCCCEEEE
LPYADIGGKEVHVEPVARFGGPGSRLHGLAGLRYFHAKQDEFVNIFGGSTFKDKTDTNSV
CCCCCCCCCEEEEEHHHHCCCCCHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCCCCE
FAELTYAITPQVDLTAASRLEREHRQRTGGSKAVRIDFDETYDVFLPKLDLAWKPTDTQT
EEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCEEECCCCCCH
YGAKVARGYNAGGAGITIGTPVVNYTYGSEYVWNYELYTRHHLKDANVILTSNIFYNDYK
HHHHHHCCCCCCCCCEEECCCEEEEECCCCEEEEEEEEEEECCCCCCEEEEECEEECCCC
DMQLPYSLGPNSSVIRNADKVETYGAEMGATWQPRWDFELFTNVGLLKTKIKKFSGSGVD
CCCCCCCCCCCCHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCC
GHELARAPAYTANMGAKYQLMAGLELSGNVAFSDSYYSQYDNDSRGRIGSYWSANTQLAY
HHHHHCCCCCCCCCCCEEEEEEEEEECCCEEECCCHHHHCCCCCCCCCCCEECCCCEEEE
TFAYGRATLYAQNLFDSERRVMVSGNDVYTATQQRPRMIGAALELTF
EEEECCEEEEEHHHCCCCCEEEEECCEEEECCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1317381 [H]