| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is frsA [C]
Identifier: 157369210
GI number: 157369210
Start: 1063004
End: 1064251
Strand: Direct
Name: frsA [C]
Synonym: Spro_0965
Alternate gene names: 157369210
Gene position: 1063004-1064251 (Clockwise)
Preceding gene: 157369209
Following gene: 157369211
Centisome position: 19.51
GC content: 57.69
Gene sequence:
>1248_bases ATGGCACAAGCCAACCTTTCTGAAATCCTGTTCAAACCCTCATTTAAACACCCTGAGACCTCAACTCTGGTACTGCGCGC GCGCAGTAAAATCAGTGCCGAGCTGCATTCCACGCTGGAGGGCAATACCGTCAGCAATTGGTACCGCATGCTCAACCCAC TGTTGTGGGCCTGGCGCGGTGTCGATCCCATTGAAATCAACGAAGTGCTGGCCCGTATTGCCGTTGCGGATGTTGAACAC ACCAACGACAAATGGCTGGATACCGTGGTCGGTTACCGTAATGGCAACTGGATCTACGAATGGGTGCATCAGGGCATGCT TTGGCAGCAGCGAGCGCTGGAACAGCAGGATCCGCTGACCGGCGGCCAGTATTGGCTCAACGCCGCCAATTTTTACAGCA TTGCCGGTTACCCGCATCTGAAAGGTGACGAGTTGGCCGAGCAGGCGGAGGCGTTGTCCAACCGGGCTTACGAAGAGGCC GCGCTGTTACTGCCGTACCAGTTGAAAGAGCTGGAGTTTCGCATTGAAGGTGGCAGCAGCATCACCGGCTTCCTGCATTT GCCGGAGAAGGGCGAAGCGCCGTTCCCGACGGTACTGATGTGCGGTAGCCTGGATACCCTGCAGACCGACTATCACCGCC TGTTCCGCGATTATCTGGCACCGCATGGCATCGCTATGCTGACCATTGATATGCCTTCCATCGGTTCTTCTTACAAGTGG AAACTGACGCAAGATTCCAGCTTCCTGCATCAGCAGGTGCTGACCCAGTTAACCACGGTGCCCTGGATTGACCATCAGCG CGTCACCGCGTTTGGTTTCCGCTTTGGCGCCAATGTGGCGGTGCGTCTGGCCTATCTGGAGCCACAGCGGCTGCGTGGCG TGGCCTGCCTGGGGCCGGTGGTGCATCGCCTGCTGTGCGACAGCAGCACCCAGAAGCACGTGCCGGACATGTATATGGAC GTGCTGGCCAGCCGGATGGGCATGGCCAACGCTTCGGATCATGTGCTGAAGGTCGAGTTGAACAGCTATTCGCTGAAAAC CCAGGGGCTGTTGGGCCGCCGTTGCCCGACGCCGATGCTGGCCGGCTACTGGGAGCAGGATCCGCTCAGCCCGAAAGAAG AGTCGCAGCTGATCGTTTCGTCCTCGATGGACGGCAAACTGATCGCCATACCGCGCAAGCCGGTGTACAGCAGTTTCCAC AAGGCGCTGCTGCAAATGTCCCATTGGATGAAAGATAAAATGCGTTAA
Upstream 100 bases:
>100_bases TCAAGTATGACGGGTTTATCGCGCCAGACTTAGGTACACTACCTCCAGTTGATTAGGCTGTTTGCGGCCTATTACCAGAT TTACGGAGGCTGTTGTTACC
Downstream 100 bases:
>100_bases TTAGTTGCTAAATTTTAACAGTTTGTTAAAAAGAATGGTCTACATTGAGGAGCTTAAGAATGACGTTACCGAGTGGTCAC CCTAAAAGCCGACTAATGAA
Product: fermentation/respiration switch protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MAQANLSEILFKPSFKHPETSTLVLRARSKISAELHSTLEGNTVSNWYRMLNPLLWAWRGVDPIEINEVLARIAVADVEH TNDKWLDTVVGYRNGNWIYEWVHQGMLWQQRALEQQDPLTGGQYWLNAANFYSIAGYPHLKGDELAEQAEALSNRAYEEA ALLLPYQLKELEFRIEGGSSITGFLHLPEKGEAPFPTVLMCGSLDTLQTDYHRLFRDYLAPHGIAMLTIDMPSIGSSYKW KLTQDSSFLHQQVLTQLTTVPWIDHQRVTAFGFRFGANVAVRLAYLEPQRLRGVACLGPVVHRLLCDSSTQKHVPDMYMD VLASRMGMANASDHVLKVELNSYSLKTQGLLGRRCPTPMLAGYWEQDPLSPKEESQLIVSSSMDGKLIAIPRKPVYSSFH KALLQMSHWMKDKMR
Sequences:
>Translated_415_residues MAQANLSEILFKPSFKHPETSTLVLRARSKISAELHSTLEGNTVSNWYRMLNPLLWAWRGVDPIEINEVLARIAVADVEH TNDKWLDTVVGYRNGNWIYEWVHQGMLWQQRALEQQDPLTGGQYWLNAANFYSIAGYPHLKGDELAEQAEALSNRAYEEA ALLLPYQLKELEFRIEGGSSITGFLHLPEKGEAPFPTVLMCGSLDTLQTDYHRLFRDYLAPHGIAMLTIDMPSIGSSYKW KLTQDSSFLHQQVLTQLTTVPWIDHQRVTAFGFRFGANVAVRLAYLEPQRLRGVACLGPVVHRLLCDSSTQKHVPDMYMD VLASRMGMANASDHVLKVELNSYSLKTQGLLGRRCPTPMLAGYWEQDPLSPKEESQLIVSSSMDGKLIAIPRKPVYSSFH KALLQMSHWMKDKMR >Mature_414_residues AQANLSEILFKPSFKHPETSTLVLRARSKISAELHSTLEGNTVSNWYRMLNPLLWAWRGVDPIEINEVLARIAVADVEHT NDKWLDTVVGYRNGNWIYEWVHQGMLWQQRALEQQDPLTGGQYWLNAANFYSIAGYPHLKGDELAEQAEALSNRAYEEAA LLLPYQLKELEFRIEGGSSITGFLHLPEKGEAPFPTVLMCGSLDTLQTDYHRLFRDYLAPHGIAMLTIDMPSIGSSYKWK LTQDSSFLHQQVLTQLTTVPWIDHQRVTAFGFRFGANVAVRLAYLEPQRLRGVACLGPVVHRLLCDSSTQKHVPDMYMDV LASRMGMANASDHVLKVELNSYSLKTQGLLGRRCPTPMLAGYWEQDPLSPKEESQLIVSSSMDGKLIAIPRKPVYSSFHK ALLQMSHWMKDKMR
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0255 family
Homologues:
Organism=Escherichia coli, GI1786434, Length=414, Percent_Identity=64.2512077294686, Blast_Score=572, Evalue=1e-164,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y965_SERP5 (A8GAD1)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001477199.1 - ProteinModelPortal: A8GAD1 - STRING: A8GAD1 - GeneID: 5603114 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_0965 - eggNOG: COG1073 - HOGENOM: HBG297988 - OMA: GANIAVR - ProtClustDB: PRK05077 - BioCyc: SPRO399741:SPRO_0965-MONOMER - HAMAP: MF_01063 - InterPro: IPR010520
Pfam domain/function: PF06500 DUF1100
EC number: NA
Molecular weight: Translated: 47131; Mature: 46999
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQANLSEILFKPSFKHPETSTLVLRARSKISAELHSTLEGNTVSNWYRMLNPLLWAWRG CCCCCCHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC VDPIEINEVLARIAVADVEHTNDKWLDTVVGYRNGNWIYEWVHQGMLWQQRALEQQDPLT CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHCCCCC GGQYWLNAANFYSIAGYPHLKGDELAEQAEALSNRAYEEAALLLPYQLKELEFRIEGGSS CCHHEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEECCEEEEEEEEEECCCCE ITGFLHLPEKGEAPFPTVLMCGSLDTLQTDYHRLFRDYLAPHGIAMLTIDMPSIGSSYKW EEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEE KLTQDSSFLHQQVLTQLTTVPWIDHQRVTAFGFRFGANVAVRLAYLEPQRLRGVACLGPV EECCCHHHHHHHHHHHHHCCCCCCCCCCEEEHEEECCCEEEEEEEECHHHHCCHHHHHHH VHRLLCDSSTQKHVPDMYMDVLASRMGMANASDHVLKVELNSYSLKTQGLLGRRCPTPML HHHHHHCCCCHHCCHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCHH AGYWEQDPLSPKEESQLIVSSSMDGKLIAIPRKPVYSSFHKALLQMSHWMKDKMR CCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AQANLSEILFKPSFKHPETSTLVLRARSKISAELHSTLEGNTVSNWYRMLNPLLWAWRG CCCCCHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC VDPIEINEVLARIAVADVEHTNDKWLDTVVGYRNGNWIYEWVHQGMLWQQRALEQQDPLT CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHCCCCC GGQYWLNAANFYSIAGYPHLKGDELAEQAEALSNRAYEEAALLLPYQLKELEFRIEGGSS CCHHEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEECCEEEEEEEEEECCCCE ITGFLHLPEKGEAPFPTVLMCGSLDTLQTDYHRLFRDYLAPHGIAMLTIDMPSIGSSYKW EEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEE KLTQDSSFLHQQVLTQLTTVPWIDHQRVTAFGFRFGANVAVRLAYLEPQRLRGVACLGPV EECCCHHHHHHHHHHHHHCCCCCCCCCCEEEHEEECCCEEEEEEEECHHHHCCHHHHHHH VHRLLCDSSTQKHVPDMYMDVLASRMGMANASDHVLKVELNSYSLKTQGLLGRRCPTPML HHHHHHCCCCHHCCHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCHH AGYWEQDPLSPKEESQLIVSSSMDGKLIAIPRKPVYSSFHKALLQMSHWMKDKMR CCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA