| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is hyuC [H]
Identifier: 157369182
GI number: 157369182
Start: 1036382
End: 1037638
Strand: Direct
Name: hyuC [H]
Synonym: Spro_0937
Alternate gene names: 157369182
Gene position: 1036382-1037638 (Clockwise)
Preceding gene: 157369181
Following gene: 157369183
Centisome position: 19.02
GC content: 63.25
Gene sequence:
>1257_bases ATGGCCGCGCTGTTAACCGCCCAGGAGGCGGAGCAGGCTGCGGCTCGGGTGATGGCACGCTGCGTTGCGCTGGCGGCGAT CAGCGCCACGCCGGGCCAGTTGACGCGGGTCTACCTGTCGCCGGAACATCAGCGAGCCAACCAACTGGTCGGCGACTGGA TGCGCACTATCGGCATGAAGGTTTGGCAGGACAGCGTCGGCAATCTCTGCGGCCGCTATGAAGGCCAAACGCCCAATGCC CCCGCACTGCTGCTCGGTTCGCATCTGGATACGGTACGCAACGCCGGGCGCTATGACGGCATGCTCGGCGTGTTGACCGC GCTGGAAGTGGTGGCGCATTTACATCGGCAGCAGCGGCGTTTGCCGGTAGCGGTAGAGGTGATTGGCTTTGCCGATGAAG AGGGCACACGCTTTAGTATCGCTCTGTTAGGCAGTCGGGGCATTAGCGGGCAGTGGCCGGTCGAGTGGTTGGATCGCACC GATGCCGACGGCATCAGCGTGGCACAGGCGTTACGTGAGTTTGGGCTGGATCCGGCAGCCGTCGGTGAAGCGCGGCGAGC ACCCAGCGATATTTGCGGCTATCTGGAATTGCATATTGAACAGGGGCCTTGTCTGGAGGCCGCCGATCTGGCTTTGGGGG TAGTGACGGCCATTAACGGTGCCCGTCGGCTTAACTGTACCTTTACCGGCCAGGCTGGGCATGCCGGTACCGTGCCGATG GGGCAACGCAAAGATGCATTGGCGGCGGCGGCGGAATGGATGGTGGCGGTAGAAGCGATCACCTCGGCCGCCGATCGGCA CCTGGTGGCTACCGTTGGCCGAATTGAAAGTCTTCCGGGGGCGGTGAATGTGATCCCCGGTGAGGTCAGGCTGTCGCTGG ACGTGCGTGGGCCGGAAGATGGCCCGCTGGCGGCGTTGCTGACGCAGTTGCTGGAACAGGCGCAGGCGATCTGTACCCGT CGGGGACTGAGTTTTGACAGTGAAGAGTTTTACCGCATAAATGCAACGGCTTGTGATGCAAATTTGCAACAACGCTGGCA GCAGGGCGTGATGGCGGTTCAGGGGCGCAGCATGGCGTTGCCGAGCGGCGCCGGGCATGATGCGATTGCCGTAGCGGCCT GTTGGCCGGTGGGTATGCTGTTTGTCCGCTGCGATCGCGGTATCAGCCACCATCCGGCCGAAGCCGTCAGCCAGTCCGAT GTGGCGCTGGCGATCCAGGCTTACTGCCATACGGTTGGCGGTTGGGAGGAGGGCTGA
Upstream 100 bases:
>100_bases TGACTGCACTGGAGGCGGTGTTGAACCGGTTGGGTTTCGCCAGCAAACAGGGCGAAGCGCTGCAGGCGGCATGGAATACT TACGACGACGGCAGCCGTTG
Downstream 100 bases:
>100_bases TGAGTCTGCAGCGATTTAATCAGTTACCGGAGGCGCAAGCGGAGCTGTTACTACGGCCCTGCGTGGATATTGCGGCCTGG ATTGCGGCGGTGGTGGTAGC
Product: allantoate amidohydrolase
Products: NA
Alternate protein names: ORF4 [H]
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MAALLTAQEAEQAAARVMARCVALAAISATPGQLTRVYLSPEHQRANQLVGDWMRTIGMKVWQDSVGNLCGRYEGQTPNA PALLLGSHLDTVRNAGRYDGMLGVLTALEVVAHLHRQQRRLPVAVEVIGFADEEGTRFSIALLGSRGISGQWPVEWLDRT DADGISVAQALREFGLDPAAVGEARRAPSDICGYLELHIEQGPCLEAADLALGVVTAINGARRLNCTFTGQAGHAGTVPM GQRKDALAAAAEWMVAVEAITSAADRHLVATVGRIESLPGAVNVIPGEVRLSLDVRGPEDGPLAALLTQLLEQAQAICTR RGLSFDSEEFYRINATACDANLQQRWQQGVMAVQGRSMALPSGAGHDAIAVAACWPVGMLFVRCDRGISHHPAEAVSQSD VALAIQAYCHTVGGWEEG
Sequences:
>Translated_418_residues MAALLTAQEAEQAAARVMARCVALAAISATPGQLTRVYLSPEHQRANQLVGDWMRTIGMKVWQDSVGNLCGRYEGQTPNA PALLLGSHLDTVRNAGRYDGMLGVLTALEVVAHLHRQQRRLPVAVEVIGFADEEGTRFSIALLGSRGISGQWPVEWLDRT DADGISVAQALREFGLDPAAVGEARRAPSDICGYLELHIEQGPCLEAADLALGVVTAINGARRLNCTFTGQAGHAGTVPM GQRKDALAAAAEWMVAVEAITSAADRHLVATVGRIESLPGAVNVIPGEVRLSLDVRGPEDGPLAALLTQLLEQAQAICTR RGLSFDSEEFYRINATACDANLQQRWQQGVMAVQGRSMALPSGAGHDAIAVAACWPVGMLFVRCDRGISHHPAEAVSQSD VALAIQAYCHTVGGWEEG >Mature_417_residues AALLTAQEAEQAAARVMARCVALAAISATPGQLTRVYLSPEHQRANQLVGDWMRTIGMKVWQDSVGNLCGRYEGQTPNAP ALLLGSHLDTVRNAGRYDGMLGVLTALEVVAHLHRQQRRLPVAVEVIGFADEEGTRFSIALLGSRGISGQWPVEWLDRTD ADGISVAQALREFGLDPAAVGEARRAPSDICGYLELHIEQGPCLEAADLALGVVTAINGARRLNCTFTGQAGHAGTVPMG QRKDALAAAAEWMVAVEAITSAADRHLVATVGRIESLPGAVNVIPGEVRLSLDVRGPEDGPLAALLTQLLEQAQAICTRR GLSFDSEEFYRINATACDANLQQRWQQGVMAVQGRSMALPSGAGHDAIAVAACWPVGMLFVRCDRGISHHPAEAVSQSDV ALAIQAYCHTVGGWEEG
Specific function: Converts N-carbamyl-L-amino acids to L-amino acids [H]
COG id: COG0624
COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI1786726, Length=388, Percent_Identity=34.5360824742268, Blast_Score=192, Evalue=4e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010158 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: 3.5.3.- [C]
Molecular weight: Translated: 44431; Mature: 44300
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS00758 ARGE_DAPE_CPG2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALLTAQEAEQAAARVMARCVALAAISATPGQLTRVYLSPEHQRANQLVGDWMRTIGMK CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH VWQDSVGNLCGRYEGQTPNAPALLLGSHLDTVRNAGRYDGMLGVLTALEVVAHLHRQQRR HHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC LPVAVEVIGFADEEGTRFSIALLGSRGISGQWPVEWLDRTDADGISVAQALREFGLDPAA CCEEEEEEEECCCCCCEEEEEEEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCHHH VGEARRAPSDICGYLELHIEQGPCLEAADLALGVVTAINGARRLNCTFTGQAGHAGTVPM HCHHHCCHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCC GQRKDALAAAAEWMVAVEAITSAADRHLVATVGRIESLPGAVNVIPGEVRLSLDVRGPED CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEECCCCC GPLAALLTQLLEQAQAICTRRGLSFDSEEFYRINATACDANLQQRWQQGVMAVQGRSMAL CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHCCEEECCCCEEC PSGAGHDAIAVAACWPVGMLFVRCDRGISHHPAEAVSQSDVALAIQAYCHTVGGWEEG CCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AALLTAQEAEQAAARVMARCVALAAISATPGQLTRVYLSPEHQRANQLVGDWMRTIGMK CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH VWQDSVGNLCGRYEGQTPNAPALLLGSHLDTVRNAGRYDGMLGVLTALEVVAHLHRQQRR HHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC LPVAVEVIGFADEEGTRFSIALLGSRGISGQWPVEWLDRTDADGISVAQALREFGLDPAA CCEEEEEEEECCCCCCEEEEEEEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCHHH VGEARRAPSDICGYLELHIEQGPCLEAADLALGVVTAINGARRLNCTFTGQAGHAGTVPM HCHHHCCHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCC GQRKDALAAAAEWMVAVEAITSAADRHLVATVGRIESLPGAVNVIPGEVRLSLDVRGPED CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEECCCCC GPLAALLTQLLEQAQAICTRRGLSFDSEEFYRINATACDANLQQRWQQGVMAVQGRSMAL CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHCCEEECCCCEEC PSGAGHDAIAVAACWPVGMLFVRCDRGISHHPAEAVSQSDVALAIQAYCHTVGGWEEG CCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1732229 [H]