| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is pucG [H]
Identifier: 157369181
GI number: 157369181
Start: 1035141
End: 1036382
Strand: Direct
Name: pucG [H]
Synonym: Spro_0936
Alternate gene names: 157369181
Gene position: 1035141-1036382 (Clockwise)
Preceding gene: 157369180
Following gene: 157369182
Centisome position: 19.0
GC content: 59.1
Gene sequence:
>1242_bases ATGTTAGATATCACCCAATTCGATCAGATTAATCCACCCGCCCGCCTGTTGATGGGGCCGGGGCCGATCAACGCGGATCC GCGCGTGCTGCGTGCCATGTCGAGCCAGTTGATTGGTCAGTACGATCCGGCGATGACTGGTTACATGAATCAGGTCATGG AACTGTACCGCGCATTGTTCCGCACCGAAAACCGCTGGACCCTGCTGGTGGACGGCACTTCTCGCTCCGGTATTGAAGCG ATGCTGGTCTCTTCCATTCGTCCAGGTGACAAGGTGCTGGTGCCGGTATTTGGTCGTTTTGGCCATCTATTGTGTGAGAT AGCCCGCCGCTGCCGCGCCGAAGTCCACACCATCGAGGTGCCCTGGGGCGAAGTATTCAGTGCCGACCAGATTGAAGACG CCATTAAGAAAGTACGCCCGCGCCTGCTGTTGACGGTGCAAGGCGATACCTCAACCACCATGCTGCAGCCGCTGGATCAA CTGGGTGATATCTGCCGCCGTCACGGCGTGCTGTTTTACACCGATGCCACCGCTTCCTTTGGCGGTAACCCGCTGGAAAC CGACGCCTGGGGGCTGGATGCGGTCTCCGCCGGTCTGCAGAAATGCCTGGGCGGCCCATCGGGCAGTTCGCCGGTCACGC TCAGCCCGCAGTTTGAAGAGATTGTCCGCCGTCGCAAATGCGTGGAGCAGGGTATTCGCACCCTCGATCACGCCGATGGT GAGGACGAGATGATCTACTCCAACTATTTCGATCTCGGCATGATCATGGATTACTGGGGCCCGGAGCGCCTGAACCACCA TACCGAAGCCACCAGCATGCTGTTTGCCGCGCGCGAGTGCGCCAGGGTTATTCTGGAAGAAGGGCTGGATAACGCCATCG CCCGGCATAAGCTGCACGGTGCGGCCATGCTGGCCGGCATTCAGGGCATGGGGCTGGAAGTCTTCGGCGATTTGGATAAC CGAATGAATAACGTGCTCGGCGTGGTGATCCCGCAGCAGGTTCATGGCGAGCAGGTACGCCAGATGATGCTGAACGACTT CGCCATTGAGATCGGCACTTCGTTCGGTCCGCTACAGGGAAAAATCTGGCGCATCGGCACCATGGGCTATAACGCGCGTA AAGACTGCGTACTGCAGACGCTGACTGCACTGGAGGCGGTGTTGAACCGGTTGGGTTTCGCCAGCAAACAGGGCGAAGCG CTGCAGGCGGCATGGAATACTTACGACGACGGCAGCCGTTGA
Upstream 100 bases:
>100_bases CAAACGCAGGAATTAAAACAATTTATTGCTTCGGTCCGCGGTCTGTCTGAGAACTGATGCCATCAAATCTATTAAGTTAT TAAGCTGGTAAGGAATTAAC
Downstream 100 bases:
>100_bases TGGCCGCGCTGTTAACCGCCCAGGAGGCGGAGCAGGCTGCGGCTCGGGTGATGGCACGCTGCGTTGCGCTGGCGGCGATC AGCGCCACGCCGGGCCAGTT
Product: class V aminotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MLDITQFDQINPPARLLMGPGPINADPRVLRAMSSQLIGQYDPAMTGYMNQVMELYRALFRTENRWTLLVDGTSRSGIEA MLVSSIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPWGEVFSADQIEDAIKKVRPRLLLTVQGDTSTTMLQPLDQ LGDICRRHGVLFYTDATASFGGNPLETDAWGLDAVSAGLQKCLGGPSGSSPVTLSPQFEEIVRRRKCVEQGIRTLDHADG EDEMIYSNYFDLGMIMDYWGPERLNHHTEATSMLFAARECARVILEEGLDNAIARHKLHGAAMLAGIQGMGLEVFGDLDN RMNNVLGVVIPQQVHGEQVRQMMLNDFAIEIGTSFGPLQGKIWRIGTMGYNARKDCVLQTLTALEAVLNRLGFASKQGEA LQAAWNTYDDGSR
Sequences:
>Translated_413_residues MLDITQFDQINPPARLLMGPGPINADPRVLRAMSSQLIGQYDPAMTGYMNQVMELYRALFRTENRWTLLVDGTSRSGIEA MLVSSIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPWGEVFSADQIEDAIKKVRPRLLLTVQGDTSTTMLQPLDQ LGDICRRHGVLFYTDATASFGGNPLETDAWGLDAVSAGLQKCLGGPSGSSPVTLSPQFEEIVRRRKCVEQGIRTLDHADG EDEMIYSNYFDLGMIMDYWGPERLNHHTEATSMLFAARECARVILEEGLDNAIARHKLHGAAMLAGIQGMGLEVFGDLDN RMNNVLGVVIPQQVHGEQVRQMMLNDFAIEIGTSFGPLQGKIWRIGTMGYNARKDCVLQTLTALEAVLNRLGFASKQGEA LQAAWNTYDDGSR >Mature_413_residues MLDITQFDQINPPARLLMGPGPINADPRVLRAMSSQLIGQYDPAMTGYMNQVMELYRALFRTENRWTLLVDGTSRSGIEA MLVSSIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPWGEVFSADQIEDAIKKVRPRLLLTVQGDTSTTMLQPLDQ LGDICRRHGVLFYTDATASFGGNPLETDAWGLDAVSAGLQKCLGGPSGSSPVTLSPQFEEIVRRRKCVEQGIRTLDHADG EDEMIYSNYFDLGMIMDYWGPERLNHHTEATSMLFAARECARVILEEGLDNAIARHKLHGAAMLAGIQGMGLEVFGDLDN RMNNVLGVVIPQQVHGEQVRQMMLNDFAIEIGTSFGPLQGKIWRIGTMGYNARKDCVLQTLTALEAVLNRLGFASKQGEA LQAAWNTYDDGSR
Specific function: Could encode ureidoglycolase or L-alanine:glyoxylate aminotransferase, or perhaps both activities [H]
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=382, Percent_Identity=32.1989528795811, Blast_Score=212, Evalue=5e-55, Organism=Caenorhabditis elegans, GI17536281, Length=369, Percent_Identity=34.9593495934959, Blast_Score=220, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6321079, Length=211, Percent_Identity=24.6445497630332, Blast_Score=63, Evalue=1e-10, Organism=Drosophila melanogaster, GI17530823, Length=377, Percent_Identity=33.9522546419098, Blast_Score=219, Evalue=3e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR020578 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: 2.6.1.-
Molecular weight: Translated: 45729; Mature: 45729
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDITQFDQINPPARLLMGPGPINADPRVLRAMSSQLIGQYDPAMTGYMNQVMELYRALF CCCCCCCCCCCCCHHEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH RTENRWTLLVDGTSRSGIEAMLVSSIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEV CCCCCEEEEEECCCCCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHEEEEC PWGEVFSADQIEDAIKKVRPRLLLTVQGDTSTTMLQPLDQLGDICRRHGVLFYTDATASF CCHHHCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCC GGNPLETDAWGLDAVSAGLQKCLGGPSGSSPVTLSPQFEEIVRRRKCVEQGIRTLDHADG CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCC EDEMIYSNYFDLGMIMDYWGPERLNHHTEATSMLFAARECARVILEEGLDNAIARHKLHG CCCEEECCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH AAMLAGIQGMGLEVFGDLDNRMNNVLGVVIPQQVHGEQVRQMMLNDFAIEIGTSFGPLQG HHHHHHHCCCCHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC KIWRIGTMGYNARKDCVLQTLTALEAVLNRLGFASKQGEALQAAWNTYDDGSR EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure MLDITQFDQINPPARLLMGPGPINADPRVLRAMSSQLIGQYDPAMTGYMNQVMELYRALF CCCCCCCCCCCCCHHEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH RTENRWTLLVDGTSRSGIEAMLVSSIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEV CCCCCEEEEEECCCCCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHEEEEC PWGEVFSADQIEDAIKKVRPRLLLTVQGDTSTTMLQPLDQLGDICRRHGVLFYTDATASF CCHHHCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCC GGNPLETDAWGLDAVSAGLQKCLGGPSGSSPVTLSPQFEEIVRRRKCVEQGIRTLDHADG CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCC EDEMIYSNYFDLGMIMDYWGPERLNHHTEATSMLFAARECARVILEEGLDNAIARHKLHG CCCEEECCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH AAMLAGIQGMGLEVFGDLDNRMNNVLGVVIPQQVHGEQVRQMMLNDFAIEIGTSFGPLQG HHHHHHHCCCCHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC KIWRIGTMGYNARKDCVLQTLTALEAVLNRLGFASKQGEALQAAWNTYDDGSR EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 11344136 [H]