| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is 157369162
Identifier: 157369162
GI number: 157369162
Start: 1016024
End: 1016353
Strand: Reverse
Name: 157369162
Synonym: Spro_0917
Alternate gene names: NA
Gene position: 1016353-1016024 (Counterclockwise)
Preceding gene: 157369163
Following gene: 157369158
Centisome position: 18.65
GC content: 47.58
Gene sequence:
>330_bases ATGGCAAAGTTTGACGAAAATGATTTTGAGCTCGGCTCGGATAACATTTTTGCCGATTTAAATCTGCCTGATGCCGACAA TCTGCGACTTAAAGCCGATCTCGCTATCCAGATCATCAATACCATCCAACAATTAGGCCTCAATCAGGCTGAAGCCGGCA AACGTATGAACCTGCCGCAGGCACGCGTCTCCGCGCTGTATAACGGTAAGTTTTTCAATATGTCGGAAAAAAAGCTGATG GATTGCCTCAACCGCCTTGGCTATGACATTGAAATTATCGTCAGGCCGAGCCAGGATCCCGTTGGTCATCGAACCCTTTC GGTGGCATAA
Upstream 100 bases:
>100_bases GTGTAATAATCCAAAACAGGCGTGGCGACACCCAAAGCGGATATTGAACTCATTAAGTCTCGCCTTAATAGAGCCAAACA GGTTTATGAGGACATGAAAA
Downstream 100 bases:
>100_bases AAATCCAGGGCCACTTCGGCCCTTTCTTCATTTCTTGAACGGGTGCTGCGCGACCCAGTGCTCGGCGATATCCTGCCGCC GGCATACCCAAACCCGATCG
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator XRE Family; Xin-Antitoxin System Antitoxin Component Xre Family; HTH Domain-Containing Transcriptional Regulator; Addiction Module Antitoxin; Helix-Turn-Helix Domain-Containing Protein; Fis Family Transcriptional Regulator
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MAKFDENDFELGSDNIFADLNLPDADNLRLKADLAIQIINTIQQLGLNQAEAGKRMNLPQARVSALYNGKFFNMSEKKLM DCLNRLGYDIEIIVRPSQDPVGHRTLSVA
Sequences:
>Translated_109_residues MAKFDENDFELGSDNIFADLNLPDADNLRLKADLAIQIINTIQQLGLNQAEAGKRMNLPQARVSALYNGKFFNMSEKKLM DCLNRLGYDIEIIVRPSQDPVGHRTLSVA >Mature_108_residues AKFDENDFELGSDNIFADLNLPDADNLRLKADLAIQIINTIQQLGLNQAEAGKRMNLPQARVSALYNGKFFNMSEKKLMD CLNRLGYDIEIIVRPSQDPVGHRTLSVA
Specific function: Unknown
COG id: COG5606
COG function: function code S; Uncharacterized conserved small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12223; Mature: 12092
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKFDENDFELGSDNIFADLNLPDADNLRLKADLAIQIINTIQQLGLNQAEAGKRMNLPQ CCCCCCCCCEECCCCEEEECCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCH ARVSALYNGKFFNMSEKKLMDCLNRLGYDIEIIVRPSQDPVGHRTLSVA HHHHHHHCCEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECC >Mature Secondary Structure AKFDENDFELGSDNIFADLNLPDADNLRLKADLAIQIINTIQQLGLNQAEAGKRMNLPQ CCCCCCCCEECCCCEEEECCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCH ARVSALYNGKFFNMSEKKLMDCLNRLGYDIEIIVRPSQDPVGHRTLSVA HHHHHHHCCEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA