| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is pucI [H]
Identifier: 157369158
GI number: 157369158
Start: 1011921
End: 1013381
Strand: Reverse
Name: pucI [H]
Synonym: Spro_0913
Alternate gene names: 157369158
Gene position: 1013381-1011921 (Counterclockwise)
Preceding gene: 157369162
Following gene: 157369156
Centisome position: 18.6
GC content: 56.06
Gene sequence:
>1461_bases ATGCCAAACCCTAATGAAAACTACAGTCCCAAGCTGTGCAACGACGATCTGGCACCCACGCGTGACCAGAACTGGAGCTG GTACAACATATTTTCTTTCTGGATGTCCGATGTACACAGCATGGGTGGCTATGTGGTGGCCGCCAGCTTTTTCGCCCTTG GCCTGTCGAGTTGGCAGGTTTTGATTTGTCTGCTGGTGGGGATTTGCATCGTGCAGTTTTGCGCAAACCTGGTGGCTAAG CCCAGCCAACTCGGCGGCGTGCCCTACGCCGTATTAAGCCGTCAGGCGTTTGGCGTGTTCGGCGCCAATATTCCGGCGGT GATCCGCGGCATGATCGCCTTCGCCTGGTACGGCATCCAAACTTATCTGGCCTCCAACGCGTTGATGCTGACGCTGCTGA AATTCTTCCCGTCGCTGGAACCGATGACCCAACCGCATTTCCTCGGGCTGTCGCAGCTTGGCTGGGGCTGTTACATCACC ATGTGGCTGTTGCAGGCGATGGTGTTTTGGCACGGTATGCAGGCAATCAAGCGCTTTATCGATATCGCCGGACCGGCGGT TTACGTGGTGATGTTTGCGCTGGCGGGCTGGATTGTTTATCGCGTCGGTTTCTCCAACCTTTCCTTCACGCTGTCGAGCA AAAACCTGAGCACCGGCGAACAGGGCTGGCTGATGCTGACCGCGACCGCGCTGGTGGTGTCCTACTTCTCCGGCCCGCTG CTTAACTTCGGCGACTTTACCCGCTACGGCAAAAGCTTTGCCGAAGTGCAGCGCGGTAACCGCTGGGGTTTGCCGTTCAA CTATCTGCTGTTCTCATTGGTGACCGTGGTGATCGTTTCCGGCACCCTGCCGCTGTTTGGGCAACTGATCACCGACCCGA TCGAAACCGTCACCCGCCTCGACAGCGATATTGCCGTCGCCCTGGGTTTGCTGACCATGATTGTCGCCACTATCGGCATC AATATTGTGGCCAACTTTGTCTCACCGGCGTTTGATTTTTCCAACTGCTCGCCACAGAAGATCAGCTTCCGCACCGGCGG GATGATCGCCGCCGTCGGCTCATTCCTGCTGACACCGTGGAACCTGTTCCAGTCACCCGAACTGATTCATTACACGCTGG ACGTATTGGCTGCCTTTATCGGCCCGCTGTTCGGTATTCTGTTGGTCGACTTTTACATCATCAAGCGCGGTGAATTGCAC GTCGACGATTTGTATAACGCCACGCCAAACGGCCGTTACTGGTACAAGAATGGGTTCAATCCGAATGCGATTTGGGCGCT GGTGCCGTCAGTGGTGATCGGGTTGGCGATCAGTTTTACGCCGAGTCTGCATCAGGTGGCGAACTTCAGTTGGTTTATCG GGGCGGCACTGGGTGGGGGATGTTATCGGATCATTGCCCGTCGCGAATGGGCAGCCAATCAGGCGGTAACCTTTGCCAAG GCGGAATTAAGCAAAGATTAA
Upstream 100 bases:
>100_bases AAGAGCAGTCTGGCCTGGATCCTGCAAATGCCCTCTCAGCAATCTTTGCCAAAAAACAGATAACAACATCCGGGTGACGT TCTTGAGAGGAGCACGATTT
Downstream 100 bases:
>100_bases AAACAACGAAGCCCTGAGTTATTACTAACTCAGGGCTTCTTAATGTTGGCGGAACGGACGGGGCTCGAACCCGCGACCCC CTGCGTGACAGGCAGGTATT
Product: cytosine/purines uracil thiamine allantoin permease
Products: NA
Alternate protein names: Allantoin transport protein [H]
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MPNPNENYSPKLCNDDLAPTRDQNWSWYNIFSFWMSDVHSMGGYVVAASFFALGLSSWQVLICLLVGICIVQFCANLVAK PSQLGGVPYAVLSRQAFGVFGANIPAVIRGMIAFAWYGIQTYLASNALMLTLLKFFPSLEPMTQPHFLGLSQLGWGCYIT MWLLQAMVFWHGMQAIKRFIDIAGPAVYVVMFALAGWIVYRVGFSNLSFTLSSKNLSTGEQGWLMLTATALVVSYFSGPL LNFGDFTRYGKSFAEVQRGNRWGLPFNYLLFSLVTVVIVSGTLPLFGQLITDPIETVTRLDSDIAVALGLLTMIVATIGI NIVANFVSPAFDFSNCSPQKISFRTGGMIAAVGSFLLTPWNLFQSPELIHYTLDVLAAFIGPLFGILLVDFYIIKRGELH VDDLYNATPNGRYWYKNGFNPNAIWALVPSVVIGLAISFTPSLHQVANFSWFIGAALGGGCYRIIARREWAANQAVTFAK AELSKD
Sequences:
>Translated_486_residues MPNPNENYSPKLCNDDLAPTRDQNWSWYNIFSFWMSDVHSMGGYVVAASFFALGLSSWQVLICLLVGICIVQFCANLVAK PSQLGGVPYAVLSRQAFGVFGANIPAVIRGMIAFAWYGIQTYLASNALMLTLLKFFPSLEPMTQPHFLGLSQLGWGCYIT MWLLQAMVFWHGMQAIKRFIDIAGPAVYVVMFALAGWIVYRVGFSNLSFTLSSKNLSTGEQGWLMLTATALVVSYFSGPL LNFGDFTRYGKSFAEVQRGNRWGLPFNYLLFSLVTVVIVSGTLPLFGQLITDPIETVTRLDSDIAVALGLLTMIVATIGI NIVANFVSPAFDFSNCSPQKISFRTGGMIAAVGSFLLTPWNLFQSPELIHYTLDVLAAFIGPLFGILLVDFYIIKRGELH VDDLYNATPNGRYWYKNGFNPNAIWALVPSVVIGLAISFTPSLHQVANFSWFIGAALGGGCYRIIARREWAANQAVTFAK AELSKD >Mature_485_residues PNPNENYSPKLCNDDLAPTRDQNWSWYNIFSFWMSDVHSMGGYVVAASFFALGLSSWQVLICLLVGICIVQFCANLVAKP SQLGGVPYAVLSRQAFGVFGANIPAVIRGMIAFAWYGIQTYLASNALMLTLLKFFPSLEPMTQPHFLGLSQLGWGCYITM WLLQAMVFWHGMQAIKRFIDIAGPAVYVVMFALAGWIVYRVGFSNLSFTLSSKNLSTGEQGWLMLTATALVVSYFSGPLL NFGDFTRYGKSFAEVQRGNRWGLPFNYLLFSLVTVVIVSGTLPLFGQLITDPIETVTRLDSDIAVALGLLTMIVATIGIN IVANFVSPAFDFSNCSPQKISFRTGGMIAAVGSFLLTPWNLFQSPELIHYTLDVLAAFIGPLFGILLVDFYIIKRGELHV DDLYNATPNGRYWYKNGFNPNAIWALVPSVVIGLAISFTPSLHQVANFSWFIGAALGGGCYRIIARREWAANQAVTFAKA ELSKD
Specific function: Transport of allantoin [H]
COG id: COG1953
COG function: function code FH; Cytosine/uracil/thiamine/allantoin permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Escherichia coli, GI87081749, Length=477, Percent_Identity=27.8825995807128, Blast_Score=219, Evalue=4e-58, Organism=Saccharomyces cerevisiae, GI6319429, Length=457, Percent_Identity=24.72647702407, Blast_Score=134, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6319495, Length=435, Percent_Identity=22.7586206896552, Blast_Score=132, Evalue=9e-32, Organism=Saccharomyces cerevisiae, GI6322219, Length=437, Percent_Identity=21.7391304347826, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6324766, Length=459, Percent_Identity=20.479302832244, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6324645, Length=459, Percent_Identity=19.6078431372549, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323266, Length=452, Percent_Identity=20.7964601769912, Blast_Score=71, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 - InterPro: IPR012681 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 53609; Mature: 53478
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNPNENYSPKLCNDDLAPTRDQNWSWYNIFSFWMSDVHSMGGYVVAASFFALGLSSWQV CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LICLLVGICIVQFCANLVAKPSQLGGVPYAVLSRQAFGVFGANIPAVIRGMIAFAWYGIQ HHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH TYLASNALMLTLLKFFPSLEPMTQPHFLGLSQLGWGCYITMWLLQAMVFWHGMQAIKRFI HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH DIAGPAVYVVMFALAGWIVYRVGFSNLSFTLSSKNLSTGEQGWLMLTATALVVSYFSGPL HHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCC LNFGDFTRYGKSFAEVQRGNRWGLPFNYLLFSLVTVVIVSGTLPLFGQLITDPIETVTRL CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC DSDIAVALGLLTMIVATIGINIVANFVSPAFDFSNCSPQKISFRTGGMIAAVGSFLLTPW CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCH NLFQSPELIHYTLDVLAAFIGPLFGILLVDFYIIKRGELHVDDLYNATPNGRYWYKNGFN HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHCCCCCCCEEECCCCC PNAIWALVPSVVIGLAISFTPSLHQVANFSWFIGAALGGGCYRIIARREWAANQAVTFAK CHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHH AELSKD HHCCCC >Mature Secondary Structure PNPNENYSPKLCNDDLAPTRDQNWSWYNIFSFWMSDVHSMGGYVVAASFFALGLSSWQV CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LICLLVGICIVQFCANLVAKPSQLGGVPYAVLSRQAFGVFGANIPAVIRGMIAFAWYGIQ HHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH TYLASNALMLTLLKFFPSLEPMTQPHFLGLSQLGWGCYITMWLLQAMVFWHGMQAIKRFI HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH DIAGPAVYVVMFALAGWIVYRVGFSNLSFTLSSKNLSTGEQGWLMLTATALVVSYFSGPL HHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCC LNFGDFTRYGKSFAEVQRGNRWGLPFNYLLFSLVTVVIVSGTLPLFGQLITDPIETVTRL CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC DSDIAVALGLLTMIVATIGINIVANFVSPAFDFSNCSPQKISFRTGGMIAAVGSFLLTPW CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCH NLFQSPELIHYTLDVLAAFIGPLFGILLVDFYIIKRGELHVDDLYNATPNGRYWYKNGFN HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHCCCCCCCEEECCCCC PNAIWALVPSVVIGLAISFTPSLHQVANFSWFIGAALGGGCYRIIARREWAANQAVTFAK CHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHH AELSKD HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 11344136 [H]