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The map label for this gene is ydfH [C]

Identifier: 157369159

GI number: 157369159

Start: 1013548

End: 1014297

Strand: Direct

Name: ydfH [C]

Synonym: Spro_0914

Alternate gene names: 157369159

Gene position: 1013548-1014297 (Clockwise)

Preceding gene: 157369157

Following gene: 157369160

Centisome position: 18.6

GC content: 58.67

Gene sequence:

>750_bases
ATGATCGGTACAGCGATCGACACCAACGCCGCCTGGCATGGGCAACAGGCCAGTTATTTCATTGAAGATAAAGACGATTG
CATTTACAACTCGCTGGTGAAAGCCATCGTCGAACATCGGTTGCTGCCCGGCAGCAAATTGCCGGAAGAAGCGTTGGCGG
AGACTTTTGGCGTCAGCCGAACCGGCATCCGGCGGGTGCTGCAGCGCCTTGCCGCAGTGCAACTGGTCACTCAACTGCCC
AAACGTGGTGCACAGGTTGCCACGCCGGGGCAGGACGAAGCGGCGAATGTTTTCCAGACGAGAAAAATGCTGGAGTGCGC
CAACCTGCCGCAGGTGGTTACCCAGTGCAAAGAAGAGCATTTGCTGGCGATGGCAGAGCTAGTGGCGCAGGAACAGCAGG
CGCACCGCGATCAGGACGGTGCGGCGGCGATCCGCCTGTCCGCCGCGTTCCACGTTCAATTGCAAGCGATCGCCGGTAAT
CAGGTGCTGACCGAGATGGTTTCGCTGCTCACACTGCGTTCATCGTTGGTGATAGCCGTTTACGGCTCGCCCTGGCAGCA
GGGTTGTCGTTGCCACGACCACGGTGATCTGCTGGGGCTGTTGCGCGACAAAGACAGTGTGGCGCTGGCGGATCATATGG
CCCGCCATTTTGACGACATCGTGGCCAACCTGCGGTTTGATCATGGTGCAAATGAAACGCCGGATTTTGCCCGGATATTT
GCCGAATCCGGCTCGAGGGAACCGCTATGA

Upstream 100 bases:

>100_bases
AGGGCATTTGCAGGATCCAGGCCAGACTGCTCTTTTTTGTATACAAAATATCTAATTCTTGTATACGATTTGACGATTGA
AGGGGACGGGGAGCAGAAAA

Downstream 100 bases:

>100_bases
TCGCTGACTGCATCATTCAGGTCATCAATCCAAATACTAGCCGGGTAATGACGGAAACCATTGCTGCCGCTGCCCGTTCG
GTGGCCGCGCCGGGTACCAA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; GntR-Family Transcriptional Regulator; Transcriptional Regulator Protein GntR Family; Transcriptional Regulator Gntr Family; FCD Domain Protein; Transcriptional Regulator Protein; GntR Family Regulatory Protein; Transcription Regulator Protein; GntR Domain-Containing Protein; Transcriptional Regulator GntR Family Protein; GntR-Type Regulator; TRANSCRIPTIONal REGULATOR GntR Family; GntR Family Transcription Regulator Protein; Bacterial Regulatory Protein; GntR Family Transcription Regulator

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MIGTAIDTNAAWHGQQASYFIEDKDDCIYNSLVKAIVEHRLLPGSKLPEEALAETFGVSRTGIRRVLQRLAAVQLVTQLP
KRGAQVATPGQDEAANVFQTRKMLECANLPQVVTQCKEEHLLAMAELVAQEQQAHRDQDGAAAIRLSAAFHVQLQAIAGN
QVLTEMVSLLTLRSSLVIAVYGSPWQQGCRCHDHGDLLGLLRDKDSVALADHMARHFDDIVANLRFDHGANETPDFARIF
AESGSREPL

Sequences:

>Translated_249_residues
MIGTAIDTNAAWHGQQASYFIEDKDDCIYNSLVKAIVEHRLLPGSKLPEEALAETFGVSRTGIRRVLQRLAAVQLVTQLP
KRGAQVATPGQDEAANVFQTRKMLECANLPQVVTQCKEEHLLAMAELVAQEQQAHRDQDGAAAIRLSAAFHVQLQAIAGN
QVLTEMVSLLTLRSSLVIAVYGSPWQQGCRCHDHGDLLGLLRDKDSVALADHMARHFDDIVANLRFDHGANETPDFARIF
AESGSREPL
>Mature_249_residues
MIGTAIDTNAAWHGQQASYFIEDKDDCIYNSLVKAIVEHRLLPGSKLPEEALAETFGVSRTGIRRVLQRLAAVQLVTQLP
KRGAQVATPGQDEAANVFQTRKMLECANLPQVVTQCKEEHLLAMAELVAQEQQAHRDQDGAAAIRLSAAFHVQLQAIAGN
QVLTEMVSLLTLRSSLVIAVYGSPWQQGCRCHDHGDLLGLLRDKDSVALADHMARHFDDIVANLRFDHGANETPDFARIF
AESGSREPL

Specific function: Unknown

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27341; Mature: 27341

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGTAIDTNAAWHGQQASYFIEDKDDCIYNSLVKAIVEHRLLPGSKLPEEALAETFGVSR
CCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCH
TGIRRVLQRLAAVQLVTQLPKRGAQVATPGQDEAANVFQTRKMLECANLPQVVTQCKEEH
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LLAMAELVAQEQQAHRDQDGAAAIRLSAAFHVQLQAIAGNQVLTEMVSLLTLRSSLVIAV
HHHHHHHHHHHHHHHCCCCCHHEEEEEHHEEEEEEEHHCCHHHHHHHHHHHHHHCEEEEE
YGSPWQQGCRCHDHGDLLGLLRDKDSVALADHMARHFDDIVANLRFDHGANETPDFARIF
ECCCHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
AESGSREPL
HHCCCCCCC
>Mature Secondary Structure
MIGTAIDTNAAWHGQQASYFIEDKDDCIYNSLVKAIVEHRLLPGSKLPEEALAETFGVSR
CCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCH
TGIRRVLQRLAAVQLVTQLPKRGAQVATPGQDEAANVFQTRKMLECANLPQVVTQCKEEH
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LLAMAELVAQEQQAHRDQDGAAAIRLSAAFHVQLQAIAGNQVLTEMVSLLTLRSSLVIAV
HHHHHHHHHHHHHHHCCCCCHHEEEEEHHEEEEEEEHHCCHHHHHHHHHHHHHHCEEEEE
YGSPWQQGCRCHDHGDLLGLLRDKDSVALADHMARHFDDIVANLRFDHGANETPDFARIF
ECCCHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
AESGSREPL
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA