| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is gloB
Identifier: 157369154
GI number: 157369154
Start: 1008855
End: 1009610
Strand: Reverse
Name: gloB
Synonym: Spro_0909
Alternate gene names: 157369154
Gene position: 1009610-1008855 (Counterclockwise)
Preceding gene: 157369156
Following gene: 157369153
Centisome position: 18.53
GC content: 47.49
Gene sequence:
>756_bases ATGAATCTTATCAGCATTCCCGCCTTCCAGGACAATTACATTTGGTTATTGGATAACCAGCAGGGGCATTGCATTATTGT CGATCCCGGTGAAGCACAGCCGGTATTGGAAACGCTGGATCGCCTGAACCTGACGCCTGACGCCATTGTGCTTACCCATC ATCATCACGATCACGTTGGCGGCGTAGCGCAAATTGTGGCGCGTTATTCCGGGCTAAAAGTCTATGGGCCGCAGGAAACT GCCGACAAGGGAGCCAACCACATCGTTCATGATGGCGAAACCATCGAAATTAACGGCCAGAAATTCGCCACAATCGCGGT TCCCGGACATACCTTGGGCCATGTAGCATTCTATAGCGCACCTTATCTGTTCTGCGGAGACACTATTTTCTCTGCTGGCT GCGGAAGGCTTTTTGAAGGCACCGCAGAGCAAATGTTCAACTCATTTCAACAGCTCGCGCAACTTCCCGATAACACCTTA ATTTGTTGTGCGCATGAATATACGCTTTCAAATCTTAAGTTTGCGCGAGCTATTTTGCCGAAAGATCGACACATTGAAAC ATATCAGCAACAAGTTGAGGCGTTACGGGCAAAAGGCCAATCCAGCGTACCCACGACGCTACAATTAGAGCGTAAAATTA ACCTATTTTTACGTTGCCATGACACTGATTTACAAAGAGAATTAGGCTTTCATACGCCACCAGAGCATCTTCATTCGGTT TTTTCCGAATTACGCCTGCGTAAAGACAACTTCTGA
Upstream 100 bases:
>100_bases AACTCTGCCCAGGACTGTGGGCCGGTGAGCTTTTGTAGAGTATGGGCTGGTTTCATGATTTATTATCTTCTTTCAAGCCG TTGCCAACGAGAGGTCCAAC
Downstream 100 bases:
>100_bases GCTTTTAGTTGTGTTGTTTGGCGAAGCAAAGTATGATTGCTCGTCTTTTAAGCAACTACATTGACACACACATGAAGGCT AAAGCGATATTTCTCGCCTC
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MNLISIPAFQDNYIWLLDNQQGHCIIVDPGEAQPVLETLDRLNLTPDAIVLTHHHHDHVGGVAQIVARYSGLKVYGPQET ADKGANHIVHDGETIEINGQKFATIAVPGHTLGHVAFYSAPYLFCGDTIFSAGCGRLFEGTAEQMFNSFQQLAQLPDNTL ICCAHEYTLSNLKFARAILPKDRHIETYQQQVEALRAKGQSSVPTTLQLERKINLFLRCHDTDLQRELGFHTPPEHLHSV FSELRLRKDNF
Sequences:
>Translated_251_residues MNLISIPAFQDNYIWLLDNQQGHCIIVDPGEAQPVLETLDRLNLTPDAIVLTHHHHDHVGGVAQIVARYSGLKVYGPQET ADKGANHIVHDGETIEINGQKFATIAVPGHTLGHVAFYSAPYLFCGDTIFSAGCGRLFEGTAEQMFNSFQQLAQLPDNTL ICCAHEYTLSNLKFARAILPKDRHIETYQQQVEALRAKGQSSVPTTLQLERKINLFLRCHDTDLQRELGFHTPPEHLHSV FSELRLRKDNF >Mature_251_residues MNLISIPAFQDNYIWLLDNQQGHCIIVDPGEAQPVLETLDRLNLTPDAIVLTHHHHDHVGGVAQIVARYSGLKVYGPQET ADKGANHIVHDGETIEINGQKFATIAVPGHTLGHVAFYSAPYLFCGDTIFSAGCGRLFEGTAEQMFNSFQQLAQLPDNTL ICCAHEYTLSNLKFARAILPKDRHIETYQQQVEALRAKGQSSVPTTLQLERKINLFLRCHDTDLQRELGFHTPPEHLHSV FSELRLRKDNF
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family
Homologues:
Organism=Homo sapiens, GI94538320, Length=260, Percent_Identity=33.8461538461538, Blast_Score=155, Evalue=3e-38, Organism=Homo sapiens, GI94538322, Length=260, Percent_Identity=33.8461538461538, Blast_Score=155, Evalue=3e-38, Organism=Homo sapiens, GI116642887, Length=237, Percent_Identity=34.5991561181435, Blast_Score=142, Evalue=4e-34, Organism=Homo sapiens, GI21703352, Length=237, Percent_Identity=34.5991561181435, Blast_Score=142, Evalue=4e-34, Organism=Homo sapiens, GI14150041, Length=251, Percent_Identity=31.4741035856574, Blast_Score=137, Evalue=6e-33, Organism=Homo sapiens, GI46361987, Length=202, Percent_Identity=32.6732673267327, Blast_Score=121, Evalue=6e-28, Organism=Escherichia coli, GI1786406, Length=251, Percent_Identity=56.5737051792829, Blast_Score=294, Evalue=4e-81, Organism=Escherichia coli, GI1787158, Length=200, Percent_Identity=30.5, Blast_Score=76, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17536925, Length=236, Percent_Identity=31.3559322033898, Blast_Score=117, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6320478, Length=260, Percent_Identity=28.8461538461538, Blast_Score=94, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6324614, Length=264, Percent_Identity=28.030303030303, Blast_Score=80, Evalue=4e-16, Organism=Drosophila melanogaster, GI21356335, Length=261, Percent_Identity=34.4827586206897, Blast_Score=159, Evalue=2e-39, Organism=Drosophila melanogaster, GI24667711, Length=262, Percent_Identity=35.1145038167939, Blast_Score=159, Evalue=2e-39, Organism=Drosophila melanogaster, GI24667703, Length=261, Percent_Identity=34.4827586206897, Blast_Score=159, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLO2_SERP5 (A8GA75)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001477143.1 - ProteinModelPortal: A8GA75 - SMR: A8GA75 - STRING: A8GA75 - GeneID: 5603796 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_0909 - eggNOG: COG0491 - HOGENOM: HBG753931 - OMA: WCAHEYT - ProtClustDB: CLSK888727 - BioCyc: SPRO399741:SPRO_0909-MONOMER - HAMAP: MF_01374 - InterPro: IPR001279 - InterPro: IPR017782 - SMART: SM00849 - TIGRFAMs: TIGR03413
Pfam domain/function: PF00753 Lactamase_B
EC number: =3.1.2.6
Molecular weight: Translated: 28173; Mature: 28173
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLISIPAFQDNYIWLLDNQQGHCIIVDPGEAQPVLETLDRLNLTPDAIVLTHHHHDHVG CCEEECCCCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHH GVAQIVARYSGLKVYGPQETADKGANHIVHDGETIEINGQKFATIAVPGHTLGHVAFYSA HHHHHHHHHCCEEEECCCHHHHCCCCCEEECCCEEEECCCEEEEEEECCCCHHHHHHHCC PYLFCGDTIFSAGCGRLFEGTAEQMFNSFQQLAQLPDNTLICCAHEYTLSNLKFARAILP CEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHCC KDRHIETYQQQVEALRAKGQSSVPTTLQLERKINLFLRCHDTDLQRELGFHTPPEHLHSV CCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEECCCCHHHHCCCCCCHHHHHHH FSELRLRKDNF HHHHHHHCCCC >Mature Secondary Structure MNLISIPAFQDNYIWLLDNQQGHCIIVDPGEAQPVLETLDRLNLTPDAIVLTHHHHDHVG CCEEECCCCCCCEEEEEECCCCCEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHH GVAQIVARYSGLKVYGPQETADKGANHIVHDGETIEINGQKFATIAVPGHTLGHVAFYSA HHHHHHHHHCCEEEECCCHHHHCCCCCEEECCCEEEECCCEEEEEEECCCCHHHHHHHCC PYLFCGDTIFSAGCGRLFEGTAEQMFNSFQQLAQLPDNTLICCAHEYTLSNLKFARAILP CEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHCC KDRHIETYQQQVEALRAKGQSSVPTTLQLERKINLFLRCHDTDLQRELGFHTPPEHLHSV CCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEECCCCHHHHCCCCCCHHHHHHH FSELRLRKDNF HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA