| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is tyrA [H]
Identifier: 157369125
GI number: 157369125
Start: 974321
End: 975442
Strand: Direct
Name: tyrA [H]
Synonym: Spro_0880
Alternate gene names: 157369125
Gene position: 974321-975442 (Clockwise)
Preceding gene: 157369124
Following gene: 157369129
Centisome position: 17.88
GC content: 55.26
Gene sequence:
>1122_bases ATGGTGGCTGAACTGACCGCGTTACGCGATCAAATTGACGAAGTGGATAAGGCGCTGCTGGAGCTGCTGGCAAAACGCCT GCAGCTGGTGGCAGAAGTGGGTGAGGTTAAGAGCCACCACGGGTTACCGGTATATGTTCCCGAGCGTGAGGCGGCGATGT TGGCCTCACGGCGTCAGGAGGCAGAGAATCTGGGTGTACCGCCCGATCTGATTGAAGATGTACTGCGCCGGGTAATGCGT GAATCTTATGTCAGTGAGAACGACAAAGGCTTTAAAACCCTGAACCCACAGCTGCGTCCTATTGTCATCATCGGCGGTAA CGGCCAAATGGGACGGTTGTTTAATCGCCTGCTGACGCTGTCCGGCTACCAGGTCAAGGTATTGGATCAGCAAGACTGGC CGCAGGCCGATGCTTTGCTGGCAGACGCCGGAATGGTGATTGTCAGCGTGCCGATTCACGTGACCGAGCAGGTGATTGAA AGATTACCTCCGCTGCCGGCAGACTGTATCCTGGTCGATCTGGCGTCGGTAAAAAATCGCCCGCTAAATGCCATGTTGGC AGCGCACTCTGGCCCGGTGGTGGGTCTGCATCCGATGTTTGGTCCGGACGTAGGCAGCGTGGCCAAGCAGGTGGTGGTCT ATTGCGATGGCCGCGAGCCGCAAGCCTATCAATGGTTGCTGGAGCAATTGCAGGTATGGGGCGCGCGTTTGCACCGTATC AGCGCGGTTGAGCACGATCAGAATATGGCCTTCATTCAGGCGCTGCGCCATTTTGCCACCTTTGCCTATGGCCTGCATTT GGCGGAAGAAAACGTTCAGTTGGAACAGTTGCTGGCACTCTCTTCACCGATCTACCGGTTGGAATTGGCAATGGTCGGGC GGCTGTTTGCGCAGGATCCGCAGTTGTACGCAGATATCATCATGTCGTCGGAAGAGAACATTGCGTTAATCAAACGCTAC TACCAACGGTTTGGCGAGGCGATAAAACTGCTGGAACAGGGTGATAAACAGGCGTTTATCCAGAGTTTCCAAAAGGTCGA GCATTGGTTTGGCGACTACGCGCAGCGTTTCCTGGTGGAAAGCCGTTCGTTGTTGCGCCAGGCGAACGACAGTCGACAAT AA
Upstream 100 bases:
>100_bases TGACGCCTGCATTAACTGGGAGAGTACCCAGACGCTGCTGCGCCATATGCACCAGGAACTCGGCACTGCGCTGACGGCAC GTACTGGAGAGTAGTAAGTT
Downstream 100 bases:
>100_bases AGTATCAGGGTTCGGCAATGCCGAACCCTTTTTTATCTCATTCAGGATGGGTTGACCGGCACCACGTTGTCGCTGGGGTA GCAGCCCAACACCTTCAGCG
Product: bifunctional chorismate mutase/prephenate dehydrogenase
Products: NA
Alternate protein names: Chorismate mutase; CM; Prephenate dehydrogenase; PDH [H]
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MVAELTALRDQIDEVDKALLELLAKRLQLVAEVGEVKSHHGLPVYVPEREAAMLASRRQEAENLGVPPDLIEDVLRRVMR ESYVSENDKGFKTLNPQLRPIVIIGGNGQMGRLFNRLLTLSGYQVKVLDQQDWPQADALLADAGMVIVSVPIHVTEQVIE RLPPLPADCILVDLASVKNRPLNAMLAAHSGPVVGLHPMFGPDVGSVAKQVVVYCDGREPQAYQWLLEQLQVWGARLHRI SAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQLLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSEENIALIKRY YQRFGEAIKLLEQGDKQAFIQSFQKVEHWFGDYAQRFLVESRSLLRQANDSRQ
Sequences:
>Translated_373_residues MVAELTALRDQIDEVDKALLELLAKRLQLVAEVGEVKSHHGLPVYVPEREAAMLASRRQEAENLGVPPDLIEDVLRRVMR ESYVSENDKGFKTLNPQLRPIVIIGGNGQMGRLFNRLLTLSGYQVKVLDQQDWPQADALLADAGMVIVSVPIHVTEQVIE RLPPLPADCILVDLASVKNRPLNAMLAAHSGPVVGLHPMFGPDVGSVAKQVVVYCDGREPQAYQWLLEQLQVWGARLHRI SAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQLLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSEENIALIKRY YQRFGEAIKLLEQGDKQAFIQSFQKVEHWFGDYAQRFLVESRSLLRQANDSRQ >Mature_373_residues MVAELTALRDQIDEVDKALLELLAKRLQLVAEVGEVKSHHGLPVYVPEREAAMLASRRQEAENLGVPPDLIEDVLRRVMR ESYVSENDKGFKTLNPQLRPIVIIGGNGQMGRLFNRLLTLSGYQVKVLDQQDWPQADALLADAGMVIVSVPIHVTEQVIE RLPPLPADCILVDLASVKNRPLNAMLAAHSGPVVGLHPMFGPDVGSVAKQVVVYCDGREPQAYQWLLEQLQVWGARLHRI SAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQLLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSEENIALIKRY YQRFGEAIKLLEQGDKQAFIQSFQKVEHWFGDYAQRFLVESRSLLRQANDSRQ
Specific function: Tyrosine biosynthesis [C]
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
Organism=Escherichia coli, GI1788952, Length=373, Percent_Identity=86.058981233244, Blast_Score=662, Evalue=0.0,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR008244 - InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR011277 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF01817 CM_2; PF02153 PDH [H]
EC number: =5.4.99.5; =1.3.1.12 [H]
Molecular weight: Translated: 42059; Mature: 42059
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAELTALRDQIDEVDKALLELLAKRLQLVAEVGEVKSHHGLPVYVPEREAAMLASRRQE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHH AENLGVPPDLIEDVLRRVMRESYVSENDKGFKTLNPQLRPIVIIGGNGQMGRLFNRLLTL HHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHC SGYQVKVLDQQDWPQADALLADAGMVIVSVPIHVTEQVIERLPPLPADCILVDLASVKNR CCCEEEEECCCCCCHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHCCC PLNAMLAAHSGPVVGLHPMFGPDVGSVAKQVVVYCDGREPQAYQWLLEQLQVWGARLHRI CCHHHHHHCCCCEEEECCCCCCCHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHH SAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQLLALSSPIYRLELAMVGRLFAQDP HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCH QLYADIIMSSEENIALIKRYYQRFGEAIKLLEQGDKQAFIQSFQKVEHWFGDYAQRFLVE HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SRSLLRQANDSRQ HHHHHHHHCCCCC >Mature Secondary Structure MVAELTALRDQIDEVDKALLELLAKRLQLVAEVGEVKSHHGLPVYVPEREAAMLASRRQE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHH AENLGVPPDLIEDVLRRVMRESYVSENDKGFKTLNPQLRPIVIIGGNGQMGRLFNRLLTL HHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHC SGYQVKVLDQQDWPQADALLADAGMVIVSVPIHVTEQVIERLPPLPADCILVDLASVKNR CCCEEEEECCCCCCHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHCCC PLNAMLAAHSGPVVGLHPMFGPDVGSVAKQVVVYCDGREPQAYQWLLEQLQVWGARLHRI CCHHHHHHCCCCEEEECCCCCCCHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHH SAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQLLALSSPIYRLELAMVGRLFAQDP HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCH QLYADIIMSSEENIALIKRYYQRFGEAIKLLEQGDKQAFIQSFQKVEHWFGDYAQRFLVE HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SRSLLRQANDSRQ HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1512561 [H]