| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is stfR [C]
Identifier: 157369110
GI number: 157369110
Start: 959216
End: 960880
Strand: Reverse
Name: stfR [C]
Synonym: Spro_0865
Alternate gene names: 157369110
Gene position: 960880-959216 (Counterclockwise)
Preceding gene: 157369111
Following gene: 157369109
Centisome position: 17.63
GC content: 51.05
Gene sequence:
>1665_bases ATGACAGCAAAATATCGCGCCCTGCTCACCGATCAGGGTAAAGCGCTGCTGGCTAACGCCGCGGCAACCGGCCAGAAGCT GGAGATCACCCAGATGGCGGTCGGCGATGGCGGCGGCTCGGCCACTCTGCCCAGCGAAAGCCAAACCAGGCTGGTGAATG AAAAACGACGGGCGGTGCTCAATTCCCTGCAGGTTAACGCCGACAGCGGCAACCAGGTGATCGCCGAGCAGGTGATCCCG GAAGATACCGGTGGCTGGTGGATCCGTGAATTGGGGTTGTACGATAAAAATGGTGTACTGGTGGCCGTGGCTAATACACC AGACACTTACAAGCCATTGCTGGCCGAAGGTGCCGGTCGTACTCAGGTAGTGCGCATGGTCCTGCTGGTCAAAGGTGACG CCAGCGCGGTGATTGTGGCGGACAAAACCGCCGTGCTGGTTTCCCGCGATACGCTGGATGCGGCTATCGCCGAACATGCC CGTTCACGTAACCACCCGGATGCCACCCTGCTGGCCAAAGGCTTCACCCAACTGAGCAGCGACAGCAATAGCAACAGCGA AGTTCTGGCAGCGACGCCAAAAGCGGTGAAAGCGGTTAATGATGCAAGCCTCAAAAAAACCGATAACCTTTCGGACCTGA CCAACAAAGCCACCGCACGTGGCAATCTCGCACTGGGTAATGCGGCAACGAGAAATGTGGGGACTGAAGCTACAAATCTG ATGGAGGTCGGCGCGTTCGGTTTCGGCGCAGGTATAAAGCATCATGCCGATGCCTATAGTAACCTTGGTGAAATTTATCG GGTGAATAACTTATCAAAAAATGCTCCTGGATCAGGCACCTATGGTGTTCTCAATCTCCCTTGCGATGGAGGACCCTCCA GCGGTTATTTGGCAATACAAAACAGCGCGGCTGCCTATATCGGTATTTCCACCGTTCCGGAGAAACCACTGTCGTGGTAC CGAATTTATACCACGGCCTATAAACCCACGGCGGCAGATGTCGGGGCTTACAGCAAGGCCGAGACCGATGGCAAGTTTGT CAAACAGATCGGCGATACTATAACCGGTGGCCTAACGGTTAATGGTTCTATTGAAACCAAGTCAGGGCTGACCACTCCGT CATTATCGGTGAATGGTAACTCGGTTATTTCAGGTCAACTGACAGCTAAAGCCGGTGTCGAACTGTTTGGGACATCTCCT TATATCGATTTTCATTACGGTAATACCAATACGGATTATGATGTCCGCATTATCAATGAAAAACAAGGTCAACTCACCCT CGGAGCTAAAACCGTTCGAGTTAATGAAAACTTTTCGGTTGGCGGTGATGCTTATATTGATGGTAGATTGTATGCAACCA TAGAATGCCGCGCAGGCGAAGCTTTATTTGCTGGTAACTCTGCCTATCAATCAGACGGAAATATAAACGGCAGTATCTGG GGTGGTTATTTATCTAACTACCTTAATCAAAATTTTGTACGAGACATTCGCCTTGGCTCTGTAGAGAGTGCGCCGTCTTG GAATGGACCAGGTTACAATGATAATGCAGGCTACGTACTGACAGGGGCATCAAATTATAATATGGATGAGTACCTAGATC ACATTTACCGTCGCCCGCTGCAAAAGCATATTAATGGTAACTGGGTTACCGTATGGAGCGTTTAA
Upstream 100 bases:
>100_bases TCGGTTTTTGGTCGGGTGAAATCCTGCGCGGATTGAGCCTGTATGTGATGTACAAGAACGGCCTGAATGACCTGGCCGAC AAACAAAAGAGAGCAACGAC
Downstream 100 bases:
>100_bases AATGAAGAACATAAAAAACTTCACTCTGACTGAGCCTGAAAGTTCAGAGCAAAAGTTACTGGCTGCCTCGCATGGTGTTT TATTTTTAAAGTCTGACAGC
Product: tail fiber repeat 2-containing protein
Products: NA
Alternate protein names: Phage Tail Fiber Protein; Tail Collar Domain Protein; Phage-Related Tail Fibre Protein-Like Protein; Tail Fiber Protein H; Variable Tail Fibre Protein; Tail Fiber-Related Protein; Phage Tail Collar Domain Protein; Phage Tail Fiber Protein H; Phage Tail Collar Domain-Containing Protein; Tail Fiber Repeat 2-Containing Protein; Variable Tail Fiber Protein; Tail Fiber Domain Protein; E14 Prophage; Tail Fiber Domain-Containing Protein; Side Tail Phage Protein; Bacteriophage Tail Protein; Phage Tail Fibre Protein; Bacteriophage Variable Tail Fiber Protein H; Phage Tail Fiber Domain Protein; Phage Variable Tail Fiber Protein; Phage Tail Collar; Phage Protein Gph; Phage-Related Tail Fiber Protein-Like Protein; Bacteriophage Variable Tail Fibre Protein; Tail Fiber Repeat 2 Protein; Prophage Tail Fiber Protein; Phage Tail Fiber Repeat; Phage Protein GpH; Phage Variable Tail Fibre Protein; Phage Tail Fiber-Like Protein; Phage P2 Tail Fiber GpH-Like Protein; Phage-Like Tail Fibre Protein; Phage-Like Tail Fiber-Like Protein; Side Tail Fiber Protein Homolog Lambdoid Prophage; Phage Tail-Like Protein; Bacteriophage Protein; LOW QUALITY PROTEIN GpH; Tail Fiber Protein GpH
Number of amino acids: Translated: 554; Mature: 553
Protein sequence:
>554_residues MTAKYRALLTDQGKALLANAAATGQKLEITQMAVGDGGGSATLPSESQTRLVNEKRRAVLNSLQVNADSGNQVIAEQVIP EDTGGWWIRELGLYDKNGVLVAVANTPDTYKPLLAEGAGRTQVVRMVLLVKGDASAVIVADKTAVLVSRDTLDAAIAEHA RSRNHPDATLLAKGFTQLSSDSNSNSEVLAATPKAVKAVNDASLKKTDNLSDLTNKATARGNLALGNAATRNVGTEATNL MEVGAFGFGAGIKHHADAYSNLGEIYRVNNLSKNAPGSGTYGVLNLPCDGGPSSGYLAIQNSAAAYIGISTVPEKPLSWY RIYTTAYKPTAADVGAYSKAETDGKFVKQIGDTITGGLTVNGSIETKSGLTTPSLSVNGNSVISGQLTAKAGVELFGTSP YIDFHYGNTNTDYDVRIINEKQGQLTLGAKTVRVNENFSVGGDAYIDGRLYATIECRAGEALFAGNSAYQSDGNINGSIW GGYLSNYLNQNFVRDIRLGSVESAPSWNGPGYNDNAGYVLTGASNYNMDEYLDHIYRRPLQKHINGNWVTVWSV
Sequences:
>Translated_554_residues MTAKYRALLTDQGKALLANAAATGQKLEITQMAVGDGGGSATLPSESQTRLVNEKRRAVLNSLQVNADSGNQVIAEQVIP EDTGGWWIRELGLYDKNGVLVAVANTPDTYKPLLAEGAGRTQVVRMVLLVKGDASAVIVADKTAVLVSRDTLDAAIAEHA RSRNHPDATLLAKGFTQLSSDSNSNSEVLAATPKAVKAVNDASLKKTDNLSDLTNKATARGNLALGNAATRNVGTEATNL MEVGAFGFGAGIKHHADAYSNLGEIYRVNNLSKNAPGSGTYGVLNLPCDGGPSSGYLAIQNSAAAYIGISTVPEKPLSWY RIYTTAYKPTAADVGAYSKAETDGKFVKQIGDTITGGLTVNGSIETKSGLTTPSLSVNGNSVISGQLTAKAGVELFGTSP YIDFHYGNTNTDYDVRIINEKQGQLTLGAKTVRVNENFSVGGDAYIDGRLYATIECRAGEALFAGNSAYQSDGNINGSIW GGYLSNYLNQNFVRDIRLGSVESAPSWNGPGYNDNAGYVLTGASNYNMDEYLDHIYRRPLQKHINGNWVTVWSV >Mature_553_residues TAKYRALLTDQGKALLANAAATGQKLEITQMAVGDGGGSATLPSESQTRLVNEKRRAVLNSLQVNADSGNQVIAEQVIPE DTGGWWIRELGLYDKNGVLVAVANTPDTYKPLLAEGAGRTQVVRMVLLVKGDASAVIVADKTAVLVSRDTLDAAIAEHAR SRNHPDATLLAKGFTQLSSDSNSNSEVLAATPKAVKAVNDASLKKTDNLSDLTNKATARGNLALGNAATRNVGTEATNLM EVGAFGFGAGIKHHADAYSNLGEIYRVNNLSKNAPGSGTYGVLNLPCDGGPSSGYLAIQNSAAAYIGISTVPEKPLSWYR IYTTAYKPTAADVGAYSKAETDGKFVKQIGDTITGGLTVNGSIETKSGLTTPSLSVNGNSVISGQLTAKAGVELFGTSPY IDFHYGNTNTDYDVRIINEKQGQLTLGAKTVRVNENFSVGGDAYIDGRLYATIECRAGEALFAGNSAYQSDGNINGSIWG GYLSNYLNQNFVRDIRLGSVESAPSWNGPGYNDNAGYVLTGASNYNMDEYLDHIYRRPLQKHINGNWVTVWSV
Specific function: Unknown
COG id: COG5301
COG function: function code R; Phage-related tail fibre protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58672; Mature: 58541
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAKYRALLTDQGKALLANAAATGQKLEITQMAVGDGGGSATLPSESQTRLVNEKRRAVL CCCCEEEEEECCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH NSLQVNADSGNQVIAEQVIPEDTGGWWIRELGLYDKNGVLVAVANTPDTYKPLLAEGAGR HHEEEECCCCCEEEHHHCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCHHHHHCCCCH TQVVRMVLLVKGDASAVIVADKTAVLVSRDTLDAAIAEHARSRNHPDATLLAKGFTQLSS HHEEEEEEEEECCCCEEEEECCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC DSNSNSEVLAATPKAVKAVNDASLKKTDNLSDLTNKATARGNLALGNAATRNVGTEATNL CCCCCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCHHHH MEVGAFGFGAGIKHHADAYSNLGEIYRVNNLSKNAPGSGTYGVLNLPCDGGPSSGYLAIQ HEECCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCEEEEE NSAAAYIGISTVPEKPLSWYRIYTTAYKPTAADVGAYSKAETDGKFVKQIGDTITGGLTV CCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEE NGSIETKSGLTTPSLSVNGNSVISGQLTAKAGVELFGTSPYIDFHYGNTNTDYDVRIINE ECCEECCCCCCCCEEECCCCEEEEEEEECCCCEEEECCCCEEEEEECCCCCCEEEEEEEC KQGQLTLGAKTVRVNENFSVGGDAYIDGRLYATIECRAGEALFAGNSAYQSDGNINGSIW CCCEEEEEEEEEEECCCCCCCCCEEECCEEEEEEEECCCCEEEECCCCCCCCCCCCCEEE GGYLSNYLNQNFVRDIRLGSVESAPSWNGPGYNDNAGYVLTGASNYNMDEYLDHIYRRPL HHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH QKHINGNWVTVWSV HHHCCCCEEEEEEC >Mature Secondary Structure TAKYRALLTDQGKALLANAAATGQKLEITQMAVGDGGGSATLPSESQTRLVNEKRRAVL CCCEEEEEECCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH NSLQVNADSGNQVIAEQVIPEDTGGWWIRELGLYDKNGVLVAVANTPDTYKPLLAEGAGR HHEEEECCCCCEEEHHHCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCHHHHHCCCCH TQVVRMVLLVKGDASAVIVADKTAVLVSRDTLDAAIAEHARSRNHPDATLLAKGFTQLSS HHEEEEEEEEECCCCEEEEECCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC DSNSNSEVLAATPKAVKAVNDASLKKTDNLSDLTNKATARGNLALGNAATRNVGTEATNL CCCCCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCHHHH MEVGAFGFGAGIKHHADAYSNLGEIYRVNNLSKNAPGSGTYGVLNLPCDGGPSSGYLAIQ HEECCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCEEEEE NSAAAYIGISTVPEKPLSWYRIYTTAYKPTAADVGAYSKAETDGKFVKQIGDTITGGLTV CCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEE NGSIETKSGLTTPSLSVNGNSVISGQLTAKAGVELFGTSPYIDFHYGNTNTDYDVRIINE ECCEECCCCCCCCEEECCCCEEEEEEEECCCCEEEECCCCEEEEEECCCCCCEEEEEEEC KQGQLTLGAKTVRVNENFSVGGDAYIDGRLYATIECRAGEALFAGNSAYQSDGNINGSIW CCCEEEEEEEEEEECCCCCCCCCEEECCEEEEEEEECCCCEEEECCCCCCCCCCCCCEEE GGYLSNYLNQNFVRDIRLGSVESAPSWNGPGYNDNAGYVLTGASNYNMDEYLDHIYRRPL HHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH QKHINGNWVTVWSV HHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA