| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is gpmB
Identifier: 157368923
GI number: 157368923
Start: 746030
End: 746677
Strand: Direct
Name: gpmB
Synonym: Spro_0678
Alternate gene names: 157368923
Gene position: 746030-746677 (Clockwise)
Preceding gene: 157368921
Following gene: 157368925
Centisome position: 13.69
GC content: 58.8
Gene sequence:
>648_bases ATGTTACAGGTATACCTCGTTCGCCACGGCGAAACGGAGTGGAATGCGGCTCGCCGCATCCAGGGTCAGTCGGACAGCCC GTTAACCGCCAACGGTGAACATCAGGCTCGCCTGGTTGCCCAGCGCGTCAGCAAACAAGGCATCACACACGTGATTACCA GCGATCTGGGGCGTACCCGCCGCACTGCGCAAATCATCGCAGAGGCTTGCGGTTGCGAGGTGATAAACGATCCGCGTTTG CGTGAGTTGCATATGGGGGTGCTGGAAGAGCGCTTAATCGACAGTCTGACGCCGCAGGAAGAACAGTGGCGCAAGCAGAT GGTCGATGGTACTGCCGATGGCCGTATCCCTCAAGGTGAGTCAATGAGCGAGTTGGGCGACCGGATGCGCGAGGCATTGG AAAGTTGCCTGATGTTGCCTGAAGGCAGCAAACCGCTGATTGTCAGCCATGGTATCGCTTTAGGCTGTCTGATCAGTACC GTGCTCGGGCTACCGGCCTATGCCGAGCGCCGCCTGCGTTTACGCAACTGTTCACTGTCGCGAGTCGATCATCAGCAGAG TCCCTGGTTGGCTTCTGGCTGGATCGTCGAAACGGCGGGCGATGTCACGCATCTGGACACGCCCGCGCTGGATGAACTGC AGCGTTAA
Upstream 100 bases:
>100_bases CATCCTTAAGCTAAGAGCCTATTCACTACGTCAGGCGTTTGCGCAAGCGGCATCTGACGACGATAAACTCAGGTTTCACG CAGTATAACGGAAAAGCAAA
Downstream 100 bases:
>100_bases CGGCGGATCGGGATCAAATAGTCGCAGTTGATCTCGGTTGGCGGTTGGGGTGGCCGGCGGTCACCCTTGGGATAAAAGCG CTCAATATCGTGCCCTTTAC
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: PGAM; Phosphoglyceromutase
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MLQVYLVRHGETEWNAARRIQGQSDSPLTANGEHQARLVAQRVSKQGITHVITSDLGRTRRTAQIIAEACGCEVINDPRL RELHMGVLEERLIDSLTPQEEQWRKQMVDGTADGRIPQGESMSELGDRMREALESCLMLPEGSKPLIVSHGIALGCLIST VLGLPAYAERRLRLRNCSLSRVDHQQSPWLASGWIVETAGDVTHLDTPALDELQR
Sequences:
>Translated_215_residues MLQVYLVRHGETEWNAARRIQGQSDSPLTANGEHQARLVAQRVSKQGITHVITSDLGRTRRTAQIIAEACGCEVINDPRL RELHMGVLEERLIDSLTPQEEQWRKQMVDGTADGRIPQGESMSELGDRMREALESCLMLPEGSKPLIVSHGIALGCLIST VLGLPAYAERRLRLRNCSLSRVDHQQSPWLASGWIVETAGDVTHLDTPALDELQR >Mature_215_residues MLQVYLVRHGETEWNAARRIQGQSDSPLTANGEHQARLVAQRVSKQGITHVITSDLGRTRRTAQIIAEACGCEVINDPRL RELHMGVLEERLIDSLTPQEEQWRKQMVDGTADGRIPQGESMSELGDRMREALESCLMLPEGSKPLIVSHGIALGCLIST VLGLPAYAERRLRLRNCSLSRVDHQQSPWLASGWIVETAGDVTHLDTPALDELQR
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily
Homologues:
Organism=Escherichia coli, GI1790856, Length=215, Percent_Identity=76.2790697674419, Blast_Score=345, Evalue=1e-96, Organism=Escherichia coli, GI1786857, Length=186, Percent_Identity=25.2688172043011, Blast_Score=61, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GPMB_SERP5 (A8G9J4)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001476912.1 - ProteinModelPortal: A8G9J4 - SMR: A8G9J4 - STRING: A8G9J4 - GeneID: 5605633 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_0678 - eggNOG: COG0406 - HOGENOM: HBG658938 - OMA: QSPWLAS - ProtClustDB: PRK03482 - BioCyc: SPRO399741:SPRO_0678-MONOMER - GO: GO:0006096 - HAMAP: MF_01040 - InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR023086 - SMART: SM00855
Pfam domain/function: PF00300 PGAM
EC number: =5.4.2.1
Molecular weight: Translated: 23947; Mature: 23947
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: PS00175 PG_MUTASE
Important sites: ACT_SITE 9-9 ACT_SITE 150-150
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQVYLVRHGETEWNAARRIQGQSDSPLTANGEHQARLVAQRVSKQGITHVITSDLGRTR CEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH RTAQIIAEACGCEVINDPRLRELHMGVLEERLIDSLTPQEEQWRKQMVDGTADGRIPQGE HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC SMSELGDRMREALESCLMLPEGSKPLIVSHGIALGCLISTVLGLPAYAERRLRLRNCSLS CHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHCCCHH RVDHQQSPWLASGWIVETAGDVTHLDTPALDELQR HHCCCCCCCEECCEEEECCCCCCCCCCCCHHHHCC >Mature Secondary Structure MLQVYLVRHGETEWNAARRIQGQSDSPLTANGEHQARLVAQRVSKQGITHVITSDLGRTR CEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH RTAQIIAEACGCEVINDPRLRELHMGVLEERLIDSLTPQEEQWRKQMVDGTADGRIPQGE HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC SMSELGDRMREALESCLMLPEGSKPLIVSHGIALGCLISTVLGLPAYAERRLRLRNCSLS CHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHCCCHH RVDHQQSPWLASGWIVETAGDVTHLDTPALDELQR HHCCCCCCCEECCEEEECCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA