| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is hpaG [H]
Identifier: 157368870
GI number: 157368870
Start: 691072
End: 691704
Strand: Direct
Name: hpaG [H]
Synonym: Spro_0625
Alternate gene names: 157368870
Gene position: 691072-691704 (Clockwise)
Preceding gene: 157368868
Following gene: 157368871
Centisome position: 12.68
GC content: 60.66
Gene sequence:
>633_bases ATGAAAGGCACCGTTTTTTCCGTCGCGTTGAACCACCGCAGCCAGATGGACGCCTGGGATCAGGCGTTTCATCAGCCACC TTATAAAACCCCGCCGAAGACCCCGGTGTGGTTTATCAAACCCCGTAATACCCACCTCGCCAACGGCGGGGCGATCCCGT TTCCTGCCGGTGAGCAAGTGCAGAGCGGCGCCACGCTGGCGGTGGTGATTGGCAACACCGCGCGCAAGGTTCCTGCCGAA CGGGTGGCCGATTATCTGGCCGGCTATGCGTTGGCCAATGATGTCAGCCTGCCGGAAAGCAGTTTTTACCGCCCGGCGAT CAAAGCGAAATGCCGCGATGGCTTTTGTCCCTTGGGGGATATCGGTCAATTGGCAACCAGCGACAGGCTGGAAATTATCA CCGAAATCAACGGTGTGGAGCAGGACCGCTGGTCGACGGCCGATCTGGTACGTTCGGTGCCGGAACTGATCGCCGCCATC AGCGATTTTATTACCCTGCAGCCGGGCGACGCGGTGCTGATCGGAACGCCGCACCAGCGGGTGGAGATTAAACCGGGGGA TGAAGTGACGGTACGCGCCGCCGGTCTGCCGACCCTGACCAACCGCGTGACGCAGGCAGGAGGAGCATCATGA
Upstream 100 bases:
>100_bases AATCCTCCCGCGTTGCGTAAAAGCTGAACAGCGTATAAAAGTAATCATTAACATATTAATGAATGCCGGTTGTCATGTTC TGTCATTGAAAGGAGTTTGC
Downstream 100 bases:
>100_bases AACACGCCCGTATTCGCCATCACGGCCAAATCTTTAACGTCAGCGTTGACCAGCAACTGCGTGTCACCCTGCCGGACGGC AGCGTGCTCAATGAACTGGA
Product: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG1
Products: NA
Alternate protein names: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; HHDD isomerase; 5-carboxymethyl-2-hydroxymuconate Delta-isomerase; 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; OPET decarboxylase [H]
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MKGTVFSVALNHRSQMDAWDQAFHQPPYKTPPKTPVWFIKPRNTHLANGGAIPFPAGEQVQSGATLAVVIGNTARKVPAE RVADYLAGYALANDVSLPESSFYRPAIKAKCRDGFCPLGDIGQLATSDRLEIITEINGVEQDRWSTADLVRSVPELIAAI SDFITLQPGDAVLIGTPHQRVEIKPGDEVTVRAAGLPTLTNRVTQAGGAS
Sequences:
>Translated_210_residues MKGTVFSVALNHRSQMDAWDQAFHQPPYKTPPKTPVWFIKPRNTHLANGGAIPFPAGEQVQSGATLAVVIGNTARKVPAE RVADYLAGYALANDVSLPESSFYRPAIKAKCRDGFCPLGDIGQLATSDRLEIITEINGVEQDRWSTADLVRSVPELIAAI SDFITLQPGDAVLIGTPHQRVEIKPGDEVTVRAAGLPTLTNRVTQAGGAS >Mature_210_residues MKGTVFSVALNHRSQMDAWDQAFHQPPYKTPPKTPVWFIKPRNTHLANGGAIPFPAGEQVQSGATLAVVIGNTARKVPAE RVADYLAGYALANDVSLPESSFYRPAIKAKCRDGFCPLGDIGQLATSDRLEIITEINGVEQDRWSTADLVRSVPELIAAI SDFITLQPGDAVLIGTPHQRVEIKPGDEVTVRAAGLPTLTNRVTQAGGAS
Specific function: Decarboxylates OPET (5-oxo-pent-3-ene-1,2,5- tricarboxylic acid) into HHDD (2-hydroxy-hept-2,4-diene-1,7- dioate) and isomerizes it to OHED (2-oxo-hept-3-ene-1,7-dioate) [H]
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAH family [H]
Homologues:
Organism=Homo sapiens, GI13654274, Length=180, Percent_Identity=30, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI215422413, Length=176, Percent_Identity=30.1136363636364, Blast_Score=78, Evalue=5e-15, Organism=Homo sapiens, GI156231349, Length=190, Percent_Identity=31.0526315789474, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI66348062, Length=171, Percent_Identity=30.4093567251462, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI40786394, Length=190, Percent_Identity=31.0526315789474, Blast_Score=74, Evalue=1e-13, Organism=Escherichia coli, GI1787428, Length=183, Percent_Identity=37.1584699453552, Blast_Score=85, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17557057, Length=171, Percent_Identity=33.9181286549708, Blast_Score=84, Evalue=4e-17, Organism=Drosophila melanogaster, GI28572127, Length=217, Percent_Identity=29.4930875576037, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI28571789, Length=181, Percent_Identity=30.939226519337, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI24663695, Length=162, Percent_Identity=26.5432098765432, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 - InterPro: IPR012684 - InterPro: IPR012686 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: =5.3.3.10; =4.1.1.68 [H]
Molecular weight: Translated: 22526; Mature: 22526
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGTVFSVALNHRSQMDAWDQAFHQPPYKTPPKTPVWFIKPRNTHLANGGAIPFPAGEQV CCCEEEEEEECCCHHCCHHHHHHCCCCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCHH QSGATLAVVIGNTARKVPAERVADYLAGYALANDVSLPESSFYRPAIKAKCRDGFCPLGD HCCCEEEEEECCCHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCC IGQLATSDRLEIITEINGVEQDRWSTADLVRSVPELIAAISDFITLQPGDAVLIGTPHQR HHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCE VEIKPGDEVTVRAAGLPTLTNRVTQAGGAS EEECCCCCEEEEECCCCHHHHHHHHCCCCC >Mature Secondary Structure MKGTVFSVALNHRSQMDAWDQAFHQPPYKTPPKTPVWFIKPRNTHLANGGAIPFPAGEQV CCCEEEEEEECCCHHCCHHHHHHCCCCCCCCCCCCEEEECCCCCEECCCCCCCCCCCCHH QSGATLAVVIGNTARKVPAERVADYLAGYALANDVSLPESSFYRPAIKAKCRDGFCPLGD HCCCEEEEEECCCHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCC IGQLATSDRLEIITEINGVEQDRWSTADLVRSVPELIAAISDFITLQPGDAVLIGTPHQR HHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCE VEIKPGDEVTVRAAGLPTLTNRVTQAGGAS EEECCCCCEEEEECCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA