| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yfcI [C]
Identifier: 157368844
GI number: 157368844
Start: 663927
End: 664883
Strand: Direct
Name: yfcI [C]
Synonym: Spro_0599
Alternate gene names: 157368844
Gene position: 663927-664883 (Clockwise)
Preceding gene: 157368843
Following gene: 157368845
Centisome position: 12.18
GC content: 51.62
Gene sequence:
>957_bases ATGAAAAAGAAAAACAAAACGCCAACGCCACACGATGCGGCATTTCGTCAGTTTTTGACGCAGCCGGAAATTGCCCGCGA CTTTATGGAGCTCCATCTTCCGCCAGAACTGCGTGCCATCTGCGACCTCAGTACGTTGAAACTGGAATCCGGTTCTTTCG TTGAAGATGACCTTCGCCAGTATTTCAGCGATGTGCTCTACAGCCTGAAAACCACTGCCGGGGAGGATGGTTATATCCAC GTACTTATTGAGCATCAGTCTACACCCGATAAACATATGGCTTTCAGGCTAATCAGGTATGCAATAGCGGCCATGCAGAG ACATTTGGACGCCGGTCACAAAAAACTGCCGTTGGTGATACCTGTCCTGTTTTATACCGGCAAACGCACTCCTTATCCTT ATTCCACCAACTGGCTGCGGGAGTTTTACGATCCGGAACTGGCGGGAAAACTCTATACAGCCGAATTTCCGCTGGTCGAT GTGACGGTTATCCCTGATAACGAGATCATGGGCCATCGCAGCATGGCCGCACTGACCTTGCTGCAGAAACATATTCGGCA GCGGGATCTGGCAGAGCTGACTGACAAACTGGCCACTATCCTGCTGAGTGGCTATCTGTCTTCGCCACAGGTGATTTCGC TGGTACACTATATTCTTCTGGCCGGAGAAGCGTCCGATGCTGAAGCCTTTGTACGCGAATTGGCACTGCGGGTACCGCAA CATGAGGATGAACTAATGACTATTGCACAACAGCTTGAGCAGAAGGGCATCGAGCAGGGCATTGAGCAGGGTATCGAGAA GGGTATCGAGAAGGGTATCGAGAAAGGGCGTCAAGAAGGCGTGCTTGAAGGAAAGATTACCGTTGCCCGCGCCATGCTGG CGAACGGCATCGACCACGACTCGGTAATGAACATGACCGGTTTGACGGCTGAAGACCTGGCGCAAATCCGCCATTAA
Upstream 100 bases:
>100_bases TATCTCTGTATTGCTCGTTAATCTTACCATGGTCGCTAATATAACCTGGCAGTTGCTTGTGATAGTGTGGAATTAAATAA CACGCAAAGGCTATCAGGGA
Downstream 100 bases:
>100_bases TTGTGTGAACCCCTCCTCCTAAATCCTGATGCAAAAAGCAGGGTCCGAAGACTTTGCTATAAAGTGTCAGGATAATCACA AACTCCCTTCCTATGTATTA
Product: putative transposase YhgA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MKKKNKTPTPHDAAFRQFLTQPEIARDFMELHLPPELRAICDLSTLKLESGSFVEDDLRQYFSDVLYSLKTTAGEDGYIH VLIEHQSTPDKHMAFRLIRYAIAAMQRHLDAGHKKLPLVIPVLFYTGKRTPYPYSTNWLREFYDPELAGKLYTAEFPLVD VTVIPDNEIMGHRSMAALTLLQKHIRQRDLAELTDKLATILLSGYLSSPQVISLVHYILLAGEASDAEAFVRELALRVPQ HEDELMTIAQQLEQKGIEQGIEQGIEKGIEKGIEKGRQEGVLEGKITVARAMLANGIDHDSVMNMTGLTAEDLAQIRH
Sequences:
>Translated_318_residues MKKKNKTPTPHDAAFRQFLTQPEIARDFMELHLPPELRAICDLSTLKLESGSFVEDDLRQYFSDVLYSLKTTAGEDGYIH VLIEHQSTPDKHMAFRLIRYAIAAMQRHLDAGHKKLPLVIPVLFYTGKRTPYPYSTNWLREFYDPELAGKLYTAEFPLVD VTVIPDNEIMGHRSMAALTLLQKHIRQRDLAELTDKLATILLSGYLSSPQVISLVHYILLAGEASDAEAFVRELALRVPQ HEDELMTIAQQLEQKGIEQGIEQGIEKGIEKGIEKGRQEGVLEGKITVARAMLANGIDHDSVMNMTGLTAEDLAQIRH >Mature_318_residues MKKKNKTPTPHDAAFRQFLTQPEIARDFMELHLPPELRAICDLSTLKLESGSFVEDDLRQYFSDVLYSLKTTAGEDGYIH VLIEHQSTPDKHMAFRLIRYAIAAMQRHLDAGHKKLPLVIPVLFYTGKRTPYPYSTNWLREFYDPELAGKLYTAEFPLVD VTVIPDNEIMGHRSMAALTLLQKHIRQRDLAELTDKLATILLSGYLSSPQVISLVHYILLAGEASDAEAFVRELALRVPQ HEDELMTIAQQLEQKGIEQGIEQGIEKGIEKGIEKGRQEGVLEGKITVARAMLANGIDHDSVMNMTGLTAEDLAQIRH
Specific function: Unknown
COG id: COG5464
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]
Homologues:
Organism=Escherichia coli, GI1788643, Length=314, Percent_Identity=50, Blast_Score=322, Evalue=2e-89, Organism=Escherichia coli, GI1789816, Length=311, Percent_Identity=50.4823151125402, Blast_Score=315, Evalue=4e-87, Organism=Escherichia coli, GI1788577, Length=310, Percent_Identity=48.3870967741936, Blast_Score=308, Evalue=3e-85, Organism=Escherichia coli, GI1786324, Length=310, Percent_Identity=49.6774193548387, Blast_Score=302, Evalue=2e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010106 - InterPro: IPR006842 [H]
Pfam domain/function: PF04754 Transposase_31 [H]
EC number: NA
Molecular weight: Translated: 35899; Mature: 35899
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKNKTPTPHDAAFRQFLTQPEIARDFMELHLPPELRAICDLSTLKLESGSFVEDDLRQ CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHCHHHEEECCCCCHHHHHHH YFSDVLYSLKTTAGEDGYIHVLIEHQSTPDKHMAFRLIRYAIAAMQRHLDAGHKKLPLVI HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH PVLFYTGKRTPYPYSTNWLREFYDPELAGKLYTAEFPLVDVTVIPDNEIMGHRSMAALTL HHHHHCCCCCCCCCCHHHHHHHHCHHHHCCEEEECCCEEEEEEECCCHHHCHHHHHHHHH LQKHIRQRDLAELTDKLATILLSGYLSSPQVISLVHYILLAGEASDAEAFVRELALRVPQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC HEDELMTIAQQLEQKGIEQGIEQGIEKGIEKGIEKGRQEGVLEGKITVARAMLANGIDHD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCH SVMNMTGLTAEDLAQIRH HHHHHCCCCHHHHHHHCC >Mature Secondary Structure MKKKNKTPTPHDAAFRQFLTQPEIARDFMELHLPPELRAICDLSTLKLESGSFVEDDLRQ CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHCHHHEEECCCCCHHHHHHH YFSDVLYSLKTTAGEDGYIHVLIEHQSTPDKHMAFRLIRYAIAAMQRHLDAGHKKLPLVI HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH PVLFYTGKRTPYPYSTNWLREFYDPELAGKLYTAEFPLVDVTVIPDNEIMGHRSMAALTL HHHHHCCCCCCCCCCHHHHHHHHCHHHHCCEEEECCCEEEEEEECCCHHHCHHHHHHHHH LQKHIRQRDLAELTDKLATILLSGYLSSPQVISLVHYILLAGEASDAEAFVRELALRVPQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC HEDELMTIAQQLEQKGIEQGIEQGIEKGIEKGIEKGRQEGVLEGKITVARAMLANGIDHD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCH SVMNMTGLTAEDLAQIRH HHHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]