| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is nahA [H]
Identifier: 157368783
GI number: 157368783
Start: 592234
End: 594627
Strand: Direct
Name: nahA [H]
Synonym: Spro_0536
Alternate gene names: 157368783
Gene position: 592234-594627 (Clockwise)
Preceding gene: 157368782
Following gene: 157368795
Centisome position: 10.87
GC content: 60.74
Gene sequence:
>2394_bases ATGCACAGATCTCTGCGTTATACGCTACTGGCTTCATCGTTATTGCTTTCCCTGGGCGCGCTGGCGCAGCCGGCCGGCGA TTTGCCGCTGATGCCCTGGCCGCAGCAGGTGGAACTGACCCAACCGGCGGGCAGGCTGGTGCTGGACCACCGTTTGTCGA TTAACCTGCAGGGTGACGATTTGGGTGATGCGCTGCCGCGCTGGCGGCAACGTATTGAGCTGCAAACCGGTTGGACGCTG GCACCGCAGGCGGCAAAAGCCGCAGGCGTGGTGATTAACGTGAACATCAAAGACAAGGTGGCGGCGCAGCCGCTGCCGGG CAGCGACGAGAGCTATAAACTGCTGGTGATGCAGGATGGCGTCACCCTGACCGCCAATACCCGTTTCGGTGCGCTGCGTG GCATGGAAACCCTGCTGCAACTGGTGCAGACCGACGGCCAGAACACCTTCCTGCCGCTGGTGAGTATCACCGACGTACCG CGTTTCCCGTGGCGCGGCGTGCTGCTGGATTCGGCGCGTCATTTCCTGCCGCTGGCGGATATTCTGCGCCAGCTCGACGG CATGGCGGCAGCCAAGCTCAACGTGTTTCACTGGCACCTGACCGACGATCAGGGTTGGCGTTTTGCTTCTGAGCATTATC CCAAGCTGCAACAGCAGGCCAGCGACGGCCAGTTTTATACTCGCGAACAGATGCAACAGGTGGTGGCCTATGCCACCGCG CGCGGCATCCGGGTGGTGCCGGAAATCGATCTGCCGGGTCATGCTTCCAGCATCGCCGTGGCTTACCCGGAGCTGATGAG CGCGCCGGGGCCGTATCAGATGGAGCGCAAGTGGGGTGTCCATAAGCCAACGCTCGATCCGACCCGTGAAGAAGTTTATC AATTTGTAGACGCTATTATTGGCGAACTGGCGGCGATCTTCCCCGATCCTTACCTGCATATTGGCGGTGACGAGGTGGAT GCCAGCCAATGGAAGCAATCGAAAACCATTCAGGCCTTTATGCAGCAACATCAGTTGGCGGACATCCATGCATTGCAGGC CTACTTCAACCAGAAGCTGGAAAAAATCCTCGAACAGCACCAACGGCAGATGGTCGGTTGGGATGAGATTTATCACCCGT CGCTACCACGCAGCATTGTGATCCAATCCTGGCAGGGTCAGGACTCACTGGGGGCCAGCGCGCAGGACGGCTATCAGGGC ATTCTGTCCACCGGCTTCTACCTCGATCAACCACAGAGCAGCGCCTATCACTATCGCAACGAGATCCTGCCGCAGCCGCT GGGCGTCGCCACCGAGGTGCAGCCCGATGAAAAGGCGCAGAGCTGGCAGTTCAGCATGCCGCGACTGAAGGGCAGCGCGG TGGAGGGCAGTTTTACCCTGATTGAAGGCAAACAAGGCTGGCGTGGCTTTATCGACTTCAACGGCAAATCTCGCCGTGCA TTGCAGGATATCGTCTGGCGTTCTCCGCAGCAGGTGAGCTTCCGCGTCGATACCTGGATGGGCGAGACGCGTCCGGTGTT CACGCTGCAGCAGGATAAGCTCAGTGGGTATACGCTGGTTGGCAACGTGCGTTACCCGACCAGCGGCGGCAAGCTGACGG CGATCCCGGCGGGCAAGATGCCGGTGGTACCGGACGCGAAGCAGCAGAGCAATATTCTTGGCGGCGAGGCGGCGCTGTGG GCGGAAAACATCAGGGCGCCGATCCTCGATCTCAAGCTGTGGCCGCGCGGGTTCGCGGTGGCGGAGCGCTTGTGGTCGGC ACAGGACGTAACCGATGAAAACAACATGTACCGGCGGCTGGCGGCAGTTGACGCCTGGTCGGTGGTGTCGGTGGGCTTGC AGCAGCATGCAGAGACCGCCCGCGAATTCACCCGGCTGGCGAACAGCGTGCAGATTGCACCGCTGCAAACCCTGGCCGAG GCGGTCGAGCCGGGCCAGTACTACACCCGTCAGCATCTGAAATTCAAGGCCGGTAATTATCACCAGTTCGAACCGCTGAA TCGCTTTGCCGACGCTCTGCCGGCGGAAAGCAACGCAGTGCGCGAGATGGGGCTGCAGGTCGCGGCCCTGGTGAAAGATC GCAATAACAGTGCGGCGGCACAGGCGCTGCGCGAACGTTTGCAACGCTGGCAGTTGAATACCGCGCCGGTGAAAACGGTG ATTGCCGGTAACCGGGTGATGCAGGATCTGGCTCCGGTAGCGCAGGATGTCGGCGCGCTGGCGGCACTGGGGCTGATGCT GCTGGAACGTTATCAGCAGAACAAACCCTTGAGCAAAGCCGAAGCCGGGCAAATACAGCAACAGCTGGATACGGCGGCGC AAATACGTGACGAAGTGGTGATTGCGGCGGTTTATCCGCTGGAAGCCCTGCTGCGTGCCAGCGCGATCGAATAA
Upstream 100 bases:
>100_bases ACCCGGCTTTTCACCCTCGCCGTTGGACATCTGTACTGTGCTCAGTCTTTATTTATAGCTTCGCTGTTTTTATTGATTTT TTTCCTCTGAGGAATTTCTG
Downstream 100 bases:
>100_bases TTTTCTGCCTCGTCGGGCTCAGCATGCGTAGGGGCTCTGCATGCCGAGCCCTCACAGCACCTACAGCTGCAGCGGCGGCA ACTGTTTGAAAATGCTGACC
Product: beta-N-acetylhexosaminidase
Products: NA
Alternate protein names: Beta-GlcNAcase; Beta-N-acetylhexosaminidase; Beta-NAHase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 797; Mature: 797
Protein sequence:
>797_residues MHRSLRYTLLASSLLLSLGALAQPAGDLPLMPWPQQVELTQPAGRLVLDHRLSINLQGDDLGDALPRWRQRIELQTGWTL APQAAKAAGVVINVNIKDKVAAQPLPGSDESYKLLVMQDGVTLTANTRFGALRGMETLLQLVQTDGQNTFLPLVSITDVP RFPWRGVLLDSARHFLPLADILRQLDGMAAAKLNVFHWHLTDDQGWRFASEHYPKLQQQASDGQFYTREQMQQVVAYATA RGIRVVPEIDLPGHASSIAVAYPELMSAPGPYQMERKWGVHKPTLDPTREEVYQFVDAIIGELAAIFPDPYLHIGGDEVD ASQWKQSKTIQAFMQQHQLADIHALQAYFNQKLEKILEQHQRQMVGWDEIYHPSLPRSIVIQSWQGQDSLGASAQDGYQG ILSTGFYLDQPQSSAYHYRNEILPQPLGVATEVQPDEKAQSWQFSMPRLKGSAVEGSFTLIEGKQGWRGFIDFNGKSRRA LQDIVWRSPQQVSFRVDTWMGETRPVFTLQQDKLSGYTLVGNVRYPTSGGKLTAIPAGKMPVVPDAKQQSNILGGEAALW AENIRAPILDLKLWPRGFAVAERLWSAQDVTDENNMYRRLAAVDAWSVVSVGLQQHAETAREFTRLANSVQIAPLQTLAE AVEPGQYYTRQHLKFKAGNYHQFEPLNRFADALPAESNAVREMGLQVAALVKDRNNSAAAQALRERLQRWQLNTAPVKTV IAGNRVMQDLAPVAQDVGALAALGLMLLERYQQNKPLSKAEAGQIQQQLDTAAQIRDEVVIAAVYPLEALLRASAIE
Sequences:
>Translated_797_residues MHRSLRYTLLASSLLLSLGALAQPAGDLPLMPWPQQVELTQPAGRLVLDHRLSINLQGDDLGDALPRWRQRIELQTGWTL APQAAKAAGVVINVNIKDKVAAQPLPGSDESYKLLVMQDGVTLTANTRFGALRGMETLLQLVQTDGQNTFLPLVSITDVP RFPWRGVLLDSARHFLPLADILRQLDGMAAAKLNVFHWHLTDDQGWRFASEHYPKLQQQASDGQFYTREQMQQVVAYATA RGIRVVPEIDLPGHASSIAVAYPELMSAPGPYQMERKWGVHKPTLDPTREEVYQFVDAIIGELAAIFPDPYLHIGGDEVD ASQWKQSKTIQAFMQQHQLADIHALQAYFNQKLEKILEQHQRQMVGWDEIYHPSLPRSIVIQSWQGQDSLGASAQDGYQG ILSTGFYLDQPQSSAYHYRNEILPQPLGVATEVQPDEKAQSWQFSMPRLKGSAVEGSFTLIEGKQGWRGFIDFNGKSRRA LQDIVWRSPQQVSFRVDTWMGETRPVFTLQQDKLSGYTLVGNVRYPTSGGKLTAIPAGKMPVVPDAKQQSNILGGEAALW AENIRAPILDLKLWPRGFAVAERLWSAQDVTDENNMYRRLAAVDAWSVVSVGLQQHAETAREFTRLANSVQIAPLQTLAE AVEPGQYYTRQHLKFKAGNYHQFEPLNRFADALPAESNAVREMGLQVAALVKDRNNSAAAQALRERLQRWQLNTAPVKTV IAGNRVMQDLAPVAQDVGALAALGLMLLERYQQNKPLSKAEAGQIQQQLDTAAQIRDEVVIAAVYPLEALLRASAIE >Mature_797_residues MHRSLRYTLLASSLLLSLGALAQPAGDLPLMPWPQQVELTQPAGRLVLDHRLSINLQGDDLGDALPRWRQRIELQTGWTL APQAAKAAGVVINVNIKDKVAAQPLPGSDESYKLLVMQDGVTLTANTRFGALRGMETLLQLVQTDGQNTFLPLVSITDVP RFPWRGVLLDSARHFLPLADILRQLDGMAAAKLNVFHWHLTDDQGWRFASEHYPKLQQQASDGQFYTREQMQQVVAYATA RGIRVVPEIDLPGHASSIAVAYPELMSAPGPYQMERKWGVHKPTLDPTREEVYQFVDAIIGELAAIFPDPYLHIGGDEVD ASQWKQSKTIQAFMQQHQLADIHALQAYFNQKLEKILEQHQRQMVGWDEIYHPSLPRSIVIQSWQGQDSLGASAQDGYQG ILSTGFYLDQPQSSAYHYRNEILPQPLGVATEVQPDEKAQSWQFSMPRLKGSAVEGSFTLIEGKQGWRGFIDFNGKSRRA LQDIVWRSPQQVSFRVDTWMGETRPVFTLQQDKLSGYTLVGNVRYPTSGGKLTAIPAGKMPVVPDAKQQSNILGGEAALW AENIRAPILDLKLWPRGFAVAERLWSAQDVTDENNMYRRLAAVDAWSVVSVGLQQHAETAREFTRLANSVQIAPLQTLAE AVEPGQYYTRQHLKFKAGNYHQFEPLNRFADALPAESNAVREMGLQVAALVKDRNNSAAAQALRERLQRWQLNTAPVKTV IAGNRVMQDLAPVAQDVGALAALGLMLLERYQQNKPLSKAEAGQIQQQLDTAAQIRDEVVIAAVYPLEALLRASAIE
Specific function: Unknown
COG id: COG3525
COG function: function code G; N-acetyl-beta-hexosaminidase
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 20 family [H]
Homologues:
Organism=Homo sapiens, GI4504373, Length=329, Percent_Identity=35.258358662614, Blast_Score=211, Evalue=3e-54, Organism=Homo sapiens, GI189181666, Length=438, Percent_Identity=33.5616438356164, Blast_Score=211, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17569815, Length=370, Percent_Identity=34.8648648648649, Blast_Score=197, Evalue=3e-50, Organism=Drosophila melanogaster, GI24657468, Length=353, Percent_Identity=32.2946175637394, Blast_Score=155, Evalue=1e-37, Organism=Drosophila melanogaster, GI17647501, Length=353, Percent_Identity=32.2946175637394, Blast_Score=155, Evalue=1e-37, Organism=Drosophila melanogaster, GI281365639, Length=353, Percent_Identity=32.2946175637394, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI24657474, Length=353, Percent_Identity=32.2946175637394, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI17933586, Length=364, Percent_Identity=33.2417582417582, Blast_Score=145, Evalue=1e-34, Organism=Drosophila melanogaster, GI45551090, Length=280, Percent_Identity=32.8571428571429, Blast_Score=134, Evalue=4e-31, Organism=Drosophila melanogaster, GI24653074, Length=280, Percent_Identity=32.8571428571429, Blast_Score=134, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015882 - InterPro: IPR001540 - InterPro: IPR015883 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR011658 [H]
Pfam domain/function: PF00728 Glyco_hydro_20; PF02838 Glyco_hydro_20b [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 88801; Mature: 88801
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRSLRYTLLASSLLLSLGALAQPAGDLPLMPWPQQVELTQPAGRLVLDHRLSINLQGDD CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEEEECCCC LGDALPRWRQRIELQTGWTLAPQAAKAAGVVINVNIKDKVAAQPLPGSDESYKLLVMQDG HHHHHHHHHHHEECCCCCEECCCHHHHCCEEEEECCCHHHCCCCCCCCCCCEEEEEEECC VTLTANTRFGALRGMETLLQLVQTDGQNTFLPLVSITDVPRFPWRGVLLDSARHFLPLAD EEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCHHH ILRQLDGMAAAKLNVFHWHLTDDQGWRFASEHYPKLQQQASDGQFYTREQMQQVVAYATA HHHHHCCCCEEEEEEEEEEEECCCCCEEHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHHH RGIRVVPEIDLPGHASSIAVAYPELMSAPGPYQMERKWGVHKPTLDPTREEVYQFVDAII CCEEEEECCCCCCCCCCEEEECHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHH GELAAIFPDPYLHIGGDEVDASQWKQSKTIQAFMQQHQLADIHALQAYFNQKLEKILEQH HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRQMVGWDEIYHPSLPRSIVIQSWQGQDSLGASAQDGYQGILSTGFYLDQPQSSAYHYRN HHHHCCHHHHCCCCCCHHHEEECCCCCCCCCCCCCHHHHHHHHCCEEECCCCCHHHHHHH EILPQPLGVATEVQPDEKAQSWQFSMPRLKGSAVEGSFTLIEGKQGWRGFIDFNGKSRRA HCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCHHHH LQDIVWRSPQQVSFRVDTWMGETRPVFTLQQDKLSGYTLVGNVRYPTSGGKLTAIPAGKM HHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCEEEEECCCCC PVVPDAKQQSNILGGEAALWAENIRAPILDLKLWPRGFAVAERLWSAQDVTDENNMYRRL CCCCCCHHHCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHH AAVDAWSVVSVGLQQHAETAREFTRLANSVQIAPLQTLAEAVEPGQYYTRQHLKFKAGNY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHCCCHHHHHHHHEEECCCC HQFEPLNRFADALPAESNAVREMGLQVAALVKDRNNSAAAQALRERLQRWQLNTAPVKTV CCCCHHHHHHHHCCCCCHHHHHHHHHHEEHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHH IAGNRVMQDLAPVAQDVGALAALGLMLLERYQQNKPLSKAEAGQIQQQLDTAAQIRDEVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCEE IAAVYPLEALLRASAIE EEEHHHHHHHHHHHCCC >Mature Secondary Structure MHRSLRYTLLASSLLLSLGALAQPAGDLPLMPWPQQVELTQPAGRLVLDHRLSINLQGDD CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEEEECCCC LGDALPRWRQRIELQTGWTLAPQAAKAAGVVINVNIKDKVAAQPLPGSDESYKLLVMQDG HHHHHHHHHHHEECCCCCEECCCHHHHCCEEEEECCCHHHCCCCCCCCCCCEEEEEEECC VTLTANTRFGALRGMETLLQLVQTDGQNTFLPLVSITDVPRFPWRGVLLDSARHFLPLAD EEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCHHH ILRQLDGMAAAKLNVFHWHLTDDQGWRFASEHYPKLQQQASDGQFYTREQMQQVVAYATA HHHHHCCCCEEEEEEEEEEEECCCCCEEHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHHH RGIRVVPEIDLPGHASSIAVAYPELMSAPGPYQMERKWGVHKPTLDPTREEVYQFVDAII CCEEEEECCCCCCCCCCEEEECHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHH GELAAIFPDPYLHIGGDEVDASQWKQSKTIQAFMQQHQLADIHALQAYFNQKLEKILEQH HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRQMVGWDEIYHPSLPRSIVIQSWQGQDSLGASAQDGYQGILSTGFYLDQPQSSAYHYRN HHHHCCHHHHCCCCCCHHHEEECCCCCCCCCCCCCHHHHHHHHCCEEECCCCCHHHHHHH EILPQPLGVATEVQPDEKAQSWQFSMPRLKGSAVEGSFTLIEGKQGWRGFIDFNGKSRRA HCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCHHHH LQDIVWRSPQQVSFRVDTWMGETRPVFTLQQDKLSGYTLVGNVRYPTSGGKLTAIPAGKM HHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCEEEEECCCCC PVVPDAKQQSNILGGEAALWAENIRAPILDLKLWPRGFAVAERLWSAQDVTDENNMYRRL CCCCCCHHHCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHH AAVDAWSVVSVGLQQHAETAREFTRLANSVQIAPLQTLAEAVEPGQYYTRQHLKFKAGNY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHCCCHHHHHHHHEEECCCC HQFEPLNRFADALPAESNAVREMGLQVAALVKDRNNSAAAQALRERLQRWQLNTAPVKTV CCCCHHHHHHHHCCCCCHHHHHHHHHHEEHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHH IAGNRVMQDLAPVAQDVGALAALGLMLLERYQQNKPLSKAEAGQIQQQLDTAAQIRDEVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCEE IAAVYPLEALLRASAIE EEEHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7881557; 12949112 [H]