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The map label for this gene is psd [H]

Identifier: 157368669

GI number: 157368669

Start: 471688

End: 472638

Strand: Reverse

Name: psd [H]

Synonym: Spro_0422

Alternate gene names: 157368669

Gene position: 472638-471688 (Counterclockwise)

Preceding gene: 157368670

Following gene: 157368668

Centisome position: 8.67

GC content: 58.57

Gene sequence:

>951_bases
GTGGCGGAGCCACGGTTACAATGCGCGCCCTTTACCCCGATTCACGAGGTTAATGTGCTGGATAGCATCAAAATTAAATT
GCAGTATTGGTTACCCAAGCTGGCGCTGACGCGCCTGGCCGGCTGGGGCGCAGATAAACAAGCCGGCTGGCTGACCCAGC
TAGTGGTGAAGGGCTTCGCCCGCTATTACCGCGTGGATATGCAGGAAGCACAAAATCCTGACCTGACCTCTTATGCGACC
TTCAACGACTTCTTTGTTCGCCCCCTGCGTGACGGCGCACGTCCGATCGTCGATGGCACCCACTGGCTGGCGCTGCCTGC
AGATGGCGCGATAAGCCAACTCGGCCCGATCAACGACGACCAGATTTTCCAGGCTAAAGGTCATTACTACAGCCTTGAGG
CGCTGCTGGCCGGCAACTACATGCTGGCTGAGCCGTTCCGCAACGGCCTGTTCGCCACCACTTACCTGGCACCTCGCGAC
TATCACCGTGTGCATATGCCATGCGATGGCGTACTGCGCGAAATGATCTATGTTCCGGGCGACCTGTTTTCTGTTAACCC
GCTGACCGCGGCCAACGTGCCAAACCTGTTTGCCCGCAATGAGCGTGTGATCTGCGTATTCGATACCGCTATCGGGCCTA
TGGTGCAGATCCTGGTGGGCGCCACCATCGTCGGCAGCATCGAAACCGTCTGGGCCGGTACCGTTACGCCACCGCGCGAA
GGCATCATTAAGCGCTGGACCTATCCGGCAGAAGGCACTGAAGGCGCTATCGCACTGGAGAAAGGGGCAGAAATGGGCCG
CTTCAAGCTCGGCTCAACGGTCATCAACCTGTTTACCCCAGGCAGCGTGCAGTTTGCCCCGCAGTTGAACAACGGCACCG
TGACCCGTATGGGCGAAGCCTTCGCAGAAATCCCGGCTGCATCTGTCGCCGCTGAAACAACGCAGATCTAA

Upstream 100 bases:

>100_bases
TTTCGAAAACTACCATCGCATTCTGGAAAGCATGGCCTCAGTGAAGGTTCGCAAGAACTTCACCGACGCCGCAGGCTGAT
AATACCGGGCGGCGTTGACT

Downstream 100 bases:

>100_bases
GGGAATTGTTACTGTGCGCCTGATTATCACGCTATTGCTCGGTTGTTTACTGTCTCAACCGGTGCTGGCCGCCGCGGTGC
CTACCGAAACACAGCTCAAG

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MAEPRLQCAPFTPIHEVNVLDSIKIKLQYWLPKLALTRLAGWGADKQAGWLTQLVVKGFARYYRVDMQEAQNPDLTSYAT
FNDFFVRPLRDGARPIVDGTHWLALPADGAISQLGPINDDQIFQAKGHYYSLEALLAGNYMLAEPFRNGLFATTYLAPRD
YHRVHMPCDGVLREMIYVPGDLFSVNPLTAANVPNLFARNERVICVFDTAIGPMVQILVGATIVGSIETVWAGTVTPPRE
GIIKRWTYPAEGTEGAIALEKGAEMGRFKLGSTVINLFTPGSVQFAPQLNNGTVTRMGEAFAEIPAASVAAETTQI

Sequences:

>Translated_316_residues
MAEPRLQCAPFTPIHEVNVLDSIKIKLQYWLPKLALTRLAGWGADKQAGWLTQLVVKGFARYYRVDMQEAQNPDLTSYAT
FNDFFVRPLRDGARPIVDGTHWLALPADGAISQLGPINDDQIFQAKGHYYSLEALLAGNYMLAEPFRNGLFATTYLAPRD
YHRVHMPCDGVLREMIYVPGDLFSVNPLTAANVPNLFARNERVICVFDTAIGPMVQILVGATIVGSIETVWAGTVTPPRE
GIIKRWTYPAEGTEGAIALEKGAEMGRFKLGSTVINLFTPGSVQFAPQLNNGTVTRMGEAFAEIPAASVAAETTQI
>Mature_315_residues
AEPRLQCAPFTPIHEVNVLDSIKIKLQYWLPKLALTRLAGWGADKQAGWLTQLVVKGFARYYRVDMQEAQNPDLTSYATF
NDFFVRPLRDGARPIVDGTHWLALPADGAISQLGPINDDQIFQAKGHYYSLEALLAGNYMLAEPFRNGLFATTYLAPRDY
HRVHMPCDGVLREMIYVPGDLFSVNPLTAANVPNLFARNERVICVFDTAIGPMVQILVGATIVGSIETVWAGTVTPPREG
IIKRWTYPAEGTEGAIALEKGAEMGRFKLGSTVINLFTPGSVQFAPQLNNGTVTRMGEAFAEIPAASVAAETTQI

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI13489112, Length=320, Percent_Identity=31.875, Blast_Score=132, Evalue=5e-31,
Organism=Escherichia coli, GI1790604, Length=284, Percent_Identity=72.1830985915493, Blast_Score=435, Evalue=1e-123,
Organism=Caenorhabditis elegans, GI71980843, Length=283, Percent_Identity=33.5689045936396, Blast_Score=132, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI71980840, Length=283, Percent_Identity=33.5689045936396, Blast_Score=131, Evalue=5e-31,
Organism=Saccharomyces cerevisiae, GI6321609, Length=232, Percent_Identity=30.1724137931034, Blast_Score=103, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6324160, Length=255, Percent_Identity=31.3725490196078, Blast_Score=87, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24649526, Length=304, Percent_Identity=30.2631578947368, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24649528, Length=304, Percent_Identity=30.2631578947368, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24649524, Length=304, Percent_Identity=30.2631578947368, Blast_Score=110, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003817
- InterPro:   IPR005221 [H]

Pfam domain/function: PF02666 PS_Dcarbxylase [H]

EC number: =4.1.1.65 [H]

Molecular weight: Translated: 34716; Mature: 34585

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPRLQCAPFTPIHEVNVLDSIKIKLQYWLPKLALTRLAGWGADKQAGWLTQLVVKGFA
CCCCCCCCCCCCCCHHCCCCHHEEEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
RYYRVDMQEAQNPDLTSYATFNDFFVRPLRDGARPIVDGTHWLALPADGAISQLGPINDD
HHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHCCCCCCC
QIFQAKGHYYSLEALLAGNYMLAEPFRNGLFATTYLAPRDYHRVHMPCDGVLREMIYVPG
CEEEECCCEEEEEEEHCCCEEEECHHHCCCEEEEEECCCCCCEEECCHHHHHHHHHHCCC
DLFSVNPLTAANVPNLFARNERVICVFDTAIGPMVQILVGATIVGSIETVWAGTVTPPRE
CEEECCCCCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEECCCCCCHH
GIIKRWTYPAEGTEGAIALEKGAEMGRFKLGSTVINLFTPGSVQFAPQLNNGTVTRMGEA
HHHHHCCCCCCCCCCEEEEECCCCCCCEECCCEEEEEECCCCEEEEEECCCCCCHHHHHH
FAEIPAASVAAETTQI
HHHCCCHHHHHHHCCC
>Mature Secondary Structure 
AEPRLQCAPFTPIHEVNVLDSIKIKLQYWLPKLALTRLAGWGADKQAGWLTQLVVKGFA
CCCCCCCCCCCCCHHCCCCHHEEEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
RYYRVDMQEAQNPDLTSYATFNDFFVRPLRDGARPIVDGTHWLALPADGAISQLGPINDD
HHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHCCCCCCC
QIFQAKGHYYSLEALLAGNYMLAEPFRNGLFATTYLAPRDYHRVHMPCDGVLREMIYVPG
CEEEECCCEEEEEEEHCCCEEEECHHHCCCEEEEEECCCCCCEEECCHHHHHHHHHHCCC
DLFSVNPLTAANVPNLFARNERVICVFDTAIGPMVQILVGATIVGSIETVWAGTVTPPRE
CEEECCCCCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEECCCCCCHH
GIIKRWTYPAEGTEGAIALEKGAEMGRFKLGSTVINLFTPGSVQFAPQLNNGTVTRMGEA
HHHHHCCCCCCCCCCEEEEECCCCCCCEECCCEEEEEECCCCEEEEEECCCCCCHHHHHH
FAEIPAASVAAETTQI
HHHCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA