| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is thiE
Identifier: 157368532
GI number: 157368532
Start: 325058
End: 325696
Strand: Reverse
Name: thiE
Synonym: Spro_0283
Alternate gene names: 157368532
Gene position: 325696-325058 (Counterclockwise)
Preceding gene: 157368533
Following gene: 157368531
Centisome position: 5.98
GC content: 58.84
Gene sequence:
>639_bases ATGACTGATATCACCACGCCCTTCCCCGCCACGCCTCACAAGTTGGGGTTATACCCGGTGGTCGACAGCGTTGAATGGAT TGCCCGTTTGCTGGACGCAGGCGTCACTACCCTTCAACTGCGGATTAAGGATCTGCCGGATGAACAGGTCGAGGACGACA TTGCCGCCGCTATTGCCCTCGGCAAGCGCTACGACGCCCGATTGTTTATCAACGACTACTGGCAACTGGCGATTAAGCAC GGTGCCTATGGCGTACATCTCGGCCAGGAGGATTTGGATACTACCGATCTGGCCGCCATTCACCGCGCCGGGCTACGTTT GGGGGTTTCCACCCATGACGATAGTGAACTGGCCCGCGCCATTGCAGTAAAACCTTCCTATATCGCACTGGGGCATATTT TTCCGACGCAAACCAAAGACATGCCTTCTGCCCCACAGGGTCTGGTGGAGCTGAAACGCCATATCGCCGGGCTGAGTGAC TACCCAACGGTGGCGATCGGCGGGATCAGTATCGATCGCGTGGCGGCAGTGCTGGATTGTGGCGTCGGTAGCGTCGCCGT GGTCAGCGCCATTACCCAGGCCCCGGACTGGCGCGCAGCGACTGCACAGCTGCTGCAACTGATCGAAGGCAAGGAGTGA
Upstream 100 bases:
>100_bases GCAGTGCAGTTAACCGGCATGGAAAAGATGTCGGCCGAGTTCCGCTCACGCGGCAGCGAGCTGTACCACAGCGCCGGTAA CCTGCAAGAGGAATTAAACA
Downstream 100 bases:
>100_bases TGCCATGCTGAACGATCAAGAATTCCTGCGCTACAGCCGCCAGTTGCTGCTGGAAGACATCGGCCCCGCAGGCCAGGAGA AACTAAAACAGTCGACGGCA
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MTDITTPFPATPHKLGLYPVVDSVEWIARLLDAGVTTLQLRIKDLPDEQVEDDIAAAIALGKRYDARLFINDYWQLAIKH GAYGVHLGQEDLDTTDLAAIHRAGLRLGVSTHDDSELARAIAVKPSYIALGHIFPTQTKDMPSAPQGLVELKRHIAGLSD YPTVAIGGISIDRVAAVLDCGVGSVAVVSAITQAPDWRAATAQLLQLIEGKE
Sequences:
>Translated_212_residues MTDITTPFPATPHKLGLYPVVDSVEWIARLLDAGVTTLQLRIKDLPDEQVEDDIAAAIALGKRYDARLFINDYWQLAIKH GAYGVHLGQEDLDTTDLAAIHRAGLRLGVSTHDDSELARAIAVKPSYIALGHIFPTQTKDMPSAPQGLVELKRHIAGLSD YPTVAIGGISIDRVAAVLDCGVGSVAVVSAITQAPDWRAATAQLLQLIEGKE >Mature_211_residues TDITTPFPATPHKLGLYPVVDSVEWIARLLDAGVTTLQLRIKDLPDEQVEDDIAAAIALGKRYDARLFINDYWQLAIKHG AYGVHLGQEDLDTTDLAAIHRAGLRLGVSTHDDSELARAIAVKPSYIALGHIFPTQTKDMPSAPQGLVELKRHIAGLSDY PTVAIGGISIDRVAAVLDCGVGSVAVVSAITQAPDWRAATAQLLQLIEGKE
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family
Homologues:
Organism=Escherichia coli, GI1790426, Length=200, Percent_Identity=74.5, Blast_Score=303, Evalue=7e-84, Organism=Saccharomyces cerevisiae, GI6325042, Length=199, Percent_Identity=31.1557788944724, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIE_SERP5 (A8G8F3)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001476521.1 - ProteinModelPortal: A8G8F3 - STRING: A8G8F3 - GeneID: 5607050 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_0283 - eggNOG: COG0352 - HOGENOM: HBG754477 - OMA: HAVQPSY - ProtClustDB: PRK03512 - BioCyc: SPRO399741:SPRO_0283-MONOMER - HAMAP: MF_00097 - InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00693
Pfam domain/function: PF02581 TMP-TENI; SSF51391 TMP_synthase
EC number: =2.5.1.3
Molecular weight: Translated: 22793; Mature: 22662
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDITTPFPATPHKLGLYPVVDSVEWIARLLDAGVTTLQLRIKDLPDEQVEDDIAAAIAL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHH GKRYDARLFINDYWQLAIKHGAYGVHLGQEDLDTTDLAAIHRAGLRLGVSTHDDSELARA CCCCCCEEEECHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHH IAVKPSYIALGHIFPTQTKDMPSAPQGLVELKRHIAGLSDYPTVAIGGISIDRVAAVLDC HHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHC GVGSVAVVSAITQAPDWRAATAQLLQLIEGKE CCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure TDITTPFPATPHKLGLYPVVDSVEWIARLLDAGVTTLQLRIKDLPDEQVEDDIAAAIAL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHH GKRYDARLFINDYWQLAIKHGAYGVHLGQEDLDTTDLAAIHRAGLRLGVSTHDDSELARA CCCCCCEEEECHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHH IAVKPSYIALGHIFPTQTKDMPSAPQGLVELKRHIAGLSDYPTVAIGGISIDRVAAVLDC HHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHC GVGSVAVVSAITQAPDWRAATAQLLQLIEGKE CCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA