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The map label for this gene is cfaA [H]

Identifier: 157368466

GI number: 157368466

Start: 245518

End: 246252

Strand: Reverse

Name: cfaA [H]

Synonym: Spro_0217

Alternate gene names: 157368466

Gene position: 246252-245518 (Counterclockwise)

Preceding gene: 157368467

Following gene: 157368465

Centisome position: 4.52

GC content: 57.01

Gene sequence:

>735_bases
ATGGCGAAAACGAATCATCCTCTAACACCCAGCAAGCTCACGGGGCTGGCAGGTGTGTTGATGCTTATCAGTACCTGCGC
CCTGGCCAACCTGACGGTCTACCCGATAAGCAAAGACATTGGTGCCGGACAAACGGCCACCACGCTACAGGTATTTTCCA
AATCGCCACAAACCCAATACGTGCGTGTCAACGTCAAGCGGATCCTCAACCCGGCTACGCCTTTGGAAAAAGAAGTAGAG
GCCGAAAGCCAGCAAGGGCTGGTCGTTTCGCCGGACAAGTTTGTCCTGCCGGCCGGTGCCACACGCACGGTACGGCTCAT
AACGTTGGTAACTCCGCTGCGGGAAGAAGCCTGGCGGGTCTATTTCGAACCTGTTGCCTCGTTGGGCGATGAGGATCCCG
ACAAGTCGCAAAAAGCGCAGGTGAACGTCAACCTGGTTTGGGGTGTGCTGATACGTTTGCTGCCGGCGGTTGCTCAACCG
CTGTTGGCACGGAGTGCCGATGGCGCTCAGTTACTGAACCAGGGCAACGTGCGTCTTGGCGTATTAAAAGTGGGTCTCTG
TTCGCCGGTCTGTCGCTGGCAACAGATTGACCGCAGTGTCTATCCCGGTGAGGCTCTGATGCTGCCCGCCGGGATGTCAG
GTGGCGTTGTACGAGTGGAATATCGCGACAGCGCCGCAACTCCGGTGACGGCGGATTTGCCAGCCGGAGCATCAACCACA
AAAACCATGAAATAA

Upstream 100 bases:

>100_bases
AACCATAATGTAACACTTTGGCTCATTATGTTGCATTATCGCGGCCCGCAAAACGGGGTAAATCCATACCTTTTTCTCGC
ATCACAGGGAGTGTGCAGAC

Downstream 100 bases:

>100_bases
GGATATTATATGAAAAAGTCGTATGCATTCGCACCCATCGCATTGGCCGCCTTGTTCTCGCTGTCAGCCATGGCAGTACA
GAAAGACATTACCGTCACGG

Product: putative fimbrial protein

Products: NA

Alternate protein names: Colonization factor antigen I subunit A [H]

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MAKTNHPLTPSKLTGLAGVLMLISTCALANLTVYPISKDIGAGQTATTLQVFSKSPQTQYVRVNVKRILNPATPLEKEVE
AESQQGLVVSPDKFVLPAGATRTVRLITLVTPLREEAWRVYFEPVASLGDEDPDKSQKAQVNVNLVWGVLIRLLPAVAQP
LLARSADGAQLLNQGNVRLGVLKVGLCSPVCRWQQIDRSVYPGEALMLPAGMSGGVVRVEYRDSAATPVTADLPAGASTT
KTMK

Sequences:

>Translated_244_residues
MAKTNHPLTPSKLTGLAGVLMLISTCALANLTVYPISKDIGAGQTATTLQVFSKSPQTQYVRVNVKRILNPATPLEKEVE
AESQQGLVVSPDKFVLPAGATRTVRLITLVTPLREEAWRVYFEPVASLGDEDPDKSQKAQVNVNLVWGVLIRLLPAVAQP
LLARSADGAQLLNQGNVRLGVLKVGLCSPVCRWQQIDRSVYPGEALMLPAGMSGGVVRVEYRDSAATPVTADLPAGASTT
KTMK
>Mature_243_residues
AKTNHPLTPSKLTGLAGVLMLISTCALANLTVYPISKDIGAGQTATTLQVFSKSPQTQYVRVNVKRILNPATPLEKEVEA
ESQQGLVVSPDKFVLPAGATRTVRLITLVTPLREEAWRVYFEPVASLGDEDPDKSQKAQVNVNLVWGVLIRLLPAVAQPL
LARSADGAQLLNQGNVRLGVLKVGLCSPVCRWQQIDRSVYPGEALMLPAGMSGGVVRVEYRDSAATPVTADLPAGASTTK
TMK

Specific function: Might function as a shuttle protein in the transport of fimbria through the periplasmic space or might function as an adhesin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26096; Mature: 25964

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTNHPLTPSKLTGLAGVLMLISTCALANLTVYPISKDIGAGQTATTLQVFSKSPQTQY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCHHHHHHHHCCCCCEE
VRVNVKRILNPATPLEKEVEAESQQGLVVSPDKFVLPAGATRTVRLITLVTPLREEAWRV
EEEEHHHHCCCCCCCHHHHHHHCCCCEEECCCCEEECCCCCCEEEEEEEHHHHHHHHHHH
YFEPVASLGDEDPDKSQKAQVNVNLVWGVLIRLLPAVAQPLLARSADGAQLLNQGNVRLG
HHHHHHHCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEE
VLKVGLCSPVCRWQQIDRSVYPGEALMLPAGMSGGVVRVEYRDSAATPVTADLPAGASTT
EEEECHHCHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCEEECCCCCCCCC
KTMK
CCCC
>Mature Secondary Structure 
AKTNHPLTPSKLTGLAGVLMLISTCALANLTVYPISKDIGAGQTATTLQVFSKSPQTQY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCHHHHHHHHCCCCCEE
VRVNVKRILNPATPLEKEVEAESQQGLVVSPDKFVLPAGATRTVRLITLVTPLREEAWRV
EEEEHHHHCCCCCCCHHHHHHHCCCCEEECCCCEEECCCCCCEEEEEEEHHHHHHHHHHH
YFEPVASLGDEDPDKSQKAQVNVNLVWGVLIRLLPAVAQPLLARSADGAQLLNQGNVRLG
HHHHHHHCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEE
VLKVGLCSPVCRWQQIDRSVYPGEALMLPAGMSGGVVRVEYRDSAATPVTADLPAGASTT
EEEECHHCHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCEEECCCCCCCCC
KTMK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2569152; 1352712 [H]