| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yhhQ [H]
Identifier: 157368453
GI number: 157368453
Start: 229834
End: 230499
Strand: Reverse
Name: yhhQ [H]
Synonym: Spro_0204
Alternate gene names: 157368453
Gene position: 230499-229834 (Counterclockwise)
Preceding gene: 157368455
Following gene: 157368452
Centisome position: 4.23
GC content: 54.05
Gene sequence:
>666_bases ATGTATTCGTTTACTGCTCGGCAGCGCCTTACCGCGTTGGTCTGGCTATCGCTGTTCCATATTGTCATCATTACCTCCAG TAACTATCTGGTGCAGTTGCCGATGTCCATTTTCGGCTTTCATACCACCTGGGGCGCTTTTACCTTTCCGTTTATTTTCC TGGCGACCGATCTGACGGTGCGTATTTTCGGCGCTCCGCTGGCGCGACGCATCATTCTTTCGGTGATGGTACCGGCGTTG TTCATCTCTTACGTGATCTCCACCGTGACCTATCAGGGTGAATGGCAGGGCTTTGCCGCCTTGGGTAGCTTTAATCTGTT TGTCGCCCGTATCGCCGTCGCCAGCTTTATGGCTTATGTGCTCGGTCAGATCCTCGACGTCCACGTTTTCAATCGCCTGC GTCAGCGCAGCGCCTGGTGGGTCGCTCCTGCCGCCGCCATGTTCCTCGGTAACATCAGCGATACCCTGTCGTTCTTCTTT ATTGCGTTCTACAAGAGCAGCGACGCCTTTATGGCTAACAACTGGGTTGAAATCGCACTGGTGGATTACAGCTTCAAAGT ACTGATCTGCTTGCTGTTCTTCCTGCCGATGTACGGCGTACTGCTGAATATGCTGCTTAAGCGCATTGCCGCCCGCCAGA ACGACGGCAGCCTGCAACCCGGCTGA
Upstream 100 bases:
>100_bases AAGTAACTGGGGTGAGCGAGTGCAGGTAACAACGCTGCAACTTGAAAGACGACGGGTATCAATTTGGGTTCCCTCACCCC ACTATTAAAAAGGCTACAAC
Downstream 100 bases:
>100_bases CCCATGTTATTATTGGCGGCCAGCCCCCCGGAGGCCGCCATCACCATCCGCCATGACAACCTCTGCTTGCATTTCACCCT GGAATAGGTTGCGATACGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MYSFTARQRLTALVWLSLFHIVIITSSNYLVQLPMSIFGFHTTWGAFTFPFIFLATDLTVRIFGAPLARRIILSVMVPAL FISYVISTVTYQGEWQGFAALGSFNLFVARIAVASFMAYVLGQILDVHVFNRLRQRSAWWVAPAAAMFLGNISDTLSFFF IAFYKSSDAFMANNWVEIALVDYSFKVLICLLFFLPMYGVLLNMLLKRIAARQNDGSLQPG
Sequences:
>Translated_221_residues MYSFTARQRLTALVWLSLFHIVIITSSNYLVQLPMSIFGFHTTWGAFTFPFIFLATDLTVRIFGAPLARRIILSVMVPAL FISYVISTVTYQGEWQGFAALGSFNLFVARIAVASFMAYVLGQILDVHVFNRLRQRSAWWVAPAAAMFLGNISDTLSFFF IAFYKSSDAFMANNWVEIALVDYSFKVLICLLFFLPMYGVLLNMLLKRIAARQNDGSLQPG >Mature_221_residues MYSFTARQRLTALVWLSLFHIVIITSSNYLVQLPMSIFGFHTTWGAFTFPFIFLATDLTVRIFGAPLARRIILSVMVPAL FISYVISTVTYQGEWQGFAALGSFNLFVARIAVASFMAYVLGQILDVHVFNRLRQRSAWWVAPAAAMFLGNISDTLSFFF IAFYKSSDAFMANNWVEIALVDYSFKVLICLLFFLPMYGVLLNMLLKRIAARQNDGSLQPG
Specific function: Unknown
COG id: COG1738
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0862 [H]
Homologues:
Organism=Escherichia coli, GI1789882, Length=219, Percent_Identity=73.972602739726, Blast_Score=333, Evalue=5e-93,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003744 [H]
Pfam domain/function: PF02592 DUF165 [H]
EC number: NA
Molecular weight: Translated: 25009; Mature: 25009
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSFTARQRLTALVWLSLFHIVIITSSNYLVQLPMSIFGFHTTWGAFTFPFIFLATDLTV CCCCHHHHHHHHHHHHHHHHHHHEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH RIFGAPLARRIILSVMVPALFISYVISTVTYQGEWQGFAALGSFNLFVARIAVASFMAYV HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LGQILDVHVFNRLRQRSAWWVAPAAAMFLGNISDTLSFFFIAFYKSSDAFMANNWVEIAL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEECCEEEEEE VDYSFKVLICLLFFLPMYGVLLNMLLKRIAARQNDGSLQPG ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MYSFTARQRLTALVWLSLFHIVIITSSNYLVQLPMSIFGFHTTWGAFTFPFIFLATDLTV CCCCHHHHHHHHHHHHHHHHHHHEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH RIFGAPLARRIILSVMVPALFISYVISTVTYQGEWQGFAALGSFNLFVARIAVASFMAYV HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LGQILDVHVFNRLRQRSAWWVAPAAAMFLGNISDTLSFFFIAFYKSSDAFMANNWVEIAL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEECCEEEEEE VDYSFKVLICLLFFLPMYGVLLNMLLKRIAARQNDGSLQPG ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]