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The map label for this gene is dcrB [H]

Identifier: 157368452

GI number: 157368452

Start: 229135

End: 229698

Strand: Reverse

Name: dcrB [H]

Synonym: Spro_0203

Alternate gene names: 157368452

Gene position: 229698-229135 (Counterclockwise)

Preceding gene: 157368453

Following gene: 157368448

Centisome position: 4.22

GC content: 58.69

Gene sequence:

>564_bases
ATGCGTAAAGTAGCAAAATTGATGGGTATCAGCCTGTTAGTGCTTGGCCTGGCGGCCTGTGACGGCGAAACCAAAGACAC
CAAGGCATCGGCAGGCGATGCCGCAGCCAGCGCCCCAGCCGGGCAACAGGTAAGCTTGCTGGATGGCAAGCTGGCGTTCA
CCCTGCCGGCGGGCATGGCGGACCAAAGCGGCAAGTTGGGTAATCAGGCGAACAACATGCACGTTTACGCCGACAGTACC
GGCCAGCGTGCACTGATCGTGATCCTCGGCGACAAAACTGCCGACAGCCTGGAAACCCTGAGCAAGCGTCTGGAAGATAC
CCAGCGCTCGCGCGACGCCAACCTGCAGGTGATCACCAACAAAGCCATCGACGTTAACGGTGTTCCGCTGCGTCAGTTGG
ACAGCATCATCACCAGCGGCGGCGAGAAAGCCTACTCCTCTATCCTGATCGGCACGCTGGACAACAACATGCTGACCATT
CAGGTGACGCTGCCGGCGGATAACCAGCAGCAGGCGCAGAGCGAGGCCGAAGGCATCATCAAAACGCTGAAACTGAAGCA
ATAA

Upstream 100 bases:

>100_bases
CGCCATCACCATCCGCCATGACAACCTCTGCTTGCATTTCACCCTGGAATAGGTTGCGATACGTGAGAGAACCCCTACCT
GAAAGGAAGAAGGAAGCCCA

Downstream 100 bases:

>100_bases
ACTTTTCCGGGGCGCAGTTCACAACTGCTGCGCCCTTAAGCCAATGCCTGCGCCAGCAGAGTGATCGGATGTTCGCAGCG
CTTGCTGGTCGACATCTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MRKVAKLMGISLLVLGLAACDGETKDTKASAGDAAASAPAGQQVSLLDGKLAFTLPAGMADQSGKLGNQANNMHVYADST
GQRALIVILGDKTADSLETLSKRLEDTQRSRDANLQVITNKAIDVNGVPLRQLDSIITSGGEKAYSSILIGTLDNNMLTI
QVTLPADNQQQAQSEAEGIIKTLKLKQ

Sequences:

>Translated_187_residues
MRKVAKLMGISLLVLGLAACDGETKDTKASAGDAAASAPAGQQVSLLDGKLAFTLPAGMADQSGKLGNQANNMHVYADST
GQRALIVILGDKTADSLETLSKRLEDTQRSRDANLQVITNKAIDVNGVPLRQLDSIITSGGEKAYSSILIGTLDNNMLTI
QVTLPADNQQQAQSEAEGIIKTLKLKQ
>Mature_187_residues
MRKVAKLMGISLLVLGLAACDGETKDTKASAGDAAASAPAGQQVSLLDGKLAFTLPAGMADQSGKLGNQANNMHVYADST
GQRALIVILGDKTADSLETLSKRLEDTQRSRDANLQVITNKAIDVNGVPLRQLDSIITSGGEKAYSSILIGTLDNNMLTI
QVTLPADNQQQAQSEAEGIIKTLKLKQ

Specific function: Required for phage C1 adsorption [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082269, Length=187, Percent_Identity=59.3582887700535, Blast_Score=221, Evalue=2e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014894 [H]

Pfam domain/function: PF08786 DUF1795 [H]

EC number: NA

Molecular weight: Translated: 19634; Mature: 19634

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVAKLMGISLLVLGLAACDGETKDTKASAGDAAASAPAGQQVSLLDGKLAFTLPAGMA
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCC
DQSGKLGNQANNMHVYADSTGQRALIVILGDKTADSLETLSKRLEDTQRSRDANLQVITN
CCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEC
KAIDVNGVPLRQLDSIITSGGEKAYSSILIGTLDNNMLTIQVTLPADNQQQAQSEAEGII
CEEECCCCCHHHHHHHHHCCCCHHHHEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHH
KTLKLKQ
HHHCCCC
>Mature Secondary Structure
MRKVAKLMGISLLVLGLAACDGETKDTKASAGDAAASAPAGQQVSLLDGKLAFTLPAGMA
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCC
DQSGKLGNQANNMHVYADSTGQRALIVILGDKTADSLETLSKRLEDTQRSRDANLQVITN
CCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEC
KAIDVNGVPLRQLDSIITSGGEKAYSSILIGTLDNNMLTIQVTLPADNQQQAQSEAEGII
CEEECCCCCHHHHHHHHHCCCCHHHHEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHH
KTLKLKQ
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 8752353 [H]