| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is hemX [H]
Identifier: 157368425
GI number: 157368425
Start: 199510
End: 200634
Strand: Reverse
Name: hemX [H]
Synonym: Spro_0176
Alternate gene names: 157368425
Gene position: 200634-199510 (Counterclockwise)
Preceding gene: 157368426
Following gene: 157368424
Centisome position: 3.68
GC content: 56.8
Gene sequence:
>1125_bases ATGACGGAACAAAATACCCCCTCCGCCCCGGTTGAAGAGCCAACCCCAGTGGCTGATAGCCCCAAGCCACCAGACGCTAA CCAGCGTAAAGGTAAAAATACCGGCCCGATATTGGGCGCGATCGCCATCGTGCTGGTTATTGCCCTTGGCGCGGGTGGCT ATTACCACACACATCGACAGGCACAGCAGTTGATCTCCGCCAATCAAAACTTGCAGCAGCAGCTCGAAGCGCTGAAACAG AGCCAACAGCAGGAAAAAAACGCGCTGGAAGGCCTGTTGCAGCAACAGGGAAAAACGCTGGATGCCGCCGACCGCGAGCA AGCGACCCTGACGCGACAACTGAGTGAACTGCAAGAAAAAGTCGCCATCATCTCCGGCAGCGACGCCAAAACCTGGTTAC TGGCACAGGCCGACTTCCTGGTGAAAATGGCCGGCCGTAAACTGTGGAGCGATCAGGACGTGACTACCGCCGCCGCCCTG CTGAAAAGTGCCGATGCCAGCCTGGCAGACATGAACGATCCGAGCCTGCTCGAGGTTCGTCGGGCGATCACCGAAGACGT CAGCACGCTGTCCACCCTAACCCAGGTGGATTTCGACGGTATCATCCTCAAGACCAATCAGTTATCCAATCAGGTTGATA ACCTTCGCCTGGCGGATAACGACAGTGACGAAGCGCCGATGGATCAGGACAGCGGTGAGCTGTCGAGTTCGATTAGCGAG TGGCGACAAAATCTGACCAAAAGCTGGCACAACTTTATGGCCGACTTTATTACCGTTCGCCGCCGTGATAGCAGTGCCGA ACCGTTGCTGGCGCCGAACCAGGACATTTACCTGCGCGAGAATATCCGTTCGCGCCTGCTGGTTGCCGCTCAGGCGATCC CACGCCACCAGAACGAAGTGTATAAACAGTCGCTGGAAACCATCTCGACCTGGATCCGCGCCTACTTTGATACCACCGAC CCGGCCACGAAAGCTTTCCTGGAAGAGTTGGATGCCCTGAGCCAGCAGTCAATCACCATGGACGTGCCGGACCAGTTGAA AAGCCAGCCACTGCTGGAAAAACTGATGCAGACCCGGGTGCGTAATCTGATGACCCAGTCCCCTGCCGCTCATCAGGAGG GATAA
Upstream 100 bases:
>100_bases CCCAGGAATTGGGCTGGAGCACAATTCGGGTAGCTGATAACGCCGATAATGACGCGCTGATCCGCGCGCTACAATAAACC TGACTATGGGATGTGCCACT
Downstream 100 bases:
>100_bases GCCATGTTACGCGTGCTATTTCTGTTCCTGGTGCTGATCGCCAGCGTGGTCGTCGGGCCGATGTTGGCCGGCCATCAGGG CTATGTGCTGATTCAGACCG
Product: putative uroporphyrinogen III C-methyltransferase
Products: NA
Alternate protein names: Urogen-III methylase; ORF X [H]
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MTEQNTPSAPVEEPTPVADSPKPPDANQRKGKNTGPILGAIAIVLVIALGAGGYYHTHRQAQQLISANQNLQQQLEALKQ SQQQEKNALEGLLQQQGKTLDAADREQATLTRQLSELQEKVAIISGSDAKTWLLAQADFLVKMAGRKLWSDQDVTTAAAL LKSADASLADMNDPSLLEVRRAITEDVSTLSTLTQVDFDGIILKTNQLSNQVDNLRLADNDSDEAPMDQDSGELSSSISE WRQNLTKSWHNFMADFITVRRRDSSAEPLLAPNQDIYLRENIRSRLLVAAQAIPRHQNEVYKQSLETISTWIRAYFDTTD PATKAFLEELDALSQQSITMDVPDQLKSQPLLEKLMQTRVRNLMTQSPAAHQEG
Sequences:
>Translated_374_residues MTEQNTPSAPVEEPTPVADSPKPPDANQRKGKNTGPILGAIAIVLVIALGAGGYYHTHRQAQQLISANQNLQQQLEALKQ SQQQEKNALEGLLQQQGKTLDAADREQATLTRQLSELQEKVAIISGSDAKTWLLAQADFLVKMAGRKLWSDQDVTTAAAL LKSADASLADMNDPSLLEVRRAITEDVSTLSTLTQVDFDGIILKTNQLSNQVDNLRLADNDSDEAPMDQDSGELSSSISE WRQNLTKSWHNFMADFITVRRRDSSAEPLLAPNQDIYLRENIRSRLLVAAQAIPRHQNEVYKQSLETISTWIRAYFDTTD PATKAFLEELDALSQQSITMDVPDQLKSQPLLEKLMQTRVRNLMTQSPAAHQEG >Mature_373_residues TEQNTPSAPVEEPTPVADSPKPPDANQRKGKNTGPILGAIAIVLVIALGAGGYYHTHRQAQQLISANQNLQQQLEALKQS QQQEKNALEGLLQQQGKTLDAADREQATLTRQLSELQEKVAIISGSDAKTWLLAQADFLVKMAGRKLWSDQDVTTAAALL KSADASLADMNDPSLLEVRRAITEDVSTLSTLTQVDFDGIILKTNQLSNQVDNLRLADNDSDEAPMDQDSGELSSSISEW RQNLTKSWHNFMADFITVRRRDSSAEPLLAPNQDIYLRENIRSRLLVAAQAIPRHQNEVYKQSLETISTWIRAYFDTTDP ATKAFLEELDALSQQSITMDVPDQLKSQPLLEKLMQTRVRNLMTQSPAAHQEG
Specific function: Siroheme and cobalamin biosynthesis. [C]
COG id: COG2959
COG function: function code H; Uncharacterized enzyme of heme biosynthesis
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790235, Length=375, Percent_Identity=65.6, Blast_Score=476, Evalue=1e-135,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007470 [H]
Pfam domain/function: PF04375 HemX [H]
EC number: =2.1.1.107 [H]
Molecular weight: Translated: 41466; Mature: 41335
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQNTPSAPVEEPTPVADSPKPPDANQRKGKNTGPILGAIAIVLVIALGAGGYYHTHRQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH AQQLISANQNLQQQLEALKQSQQQEKNALEGLLQQQGKTLDAADREQATLTRQLSELQEK HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH VAIISGSDAKTWLLAQADFLVKMAGRKLWSDQDVTTAAALLKSADASLADMNDPSLLEVR HHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHCCCCCHHHHHH RAITEDVSTLSTLTQVDFDGIILKTNQLSNQVDNLRLADNDSDEAPMDQDSGELSSSISE HHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCEECCCCCCCCCCCCCCHHHHHHHHH WRQNLTKSWHNFMADFITVRRRDSSAEPLLAPNQDIYLRENIRSRLLVAAQAIPRHQNEV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCHHHHH YKQSLETISTWIRAYFDTTDPATKAFLEELDALSQQSITMDVPDQLKSQPLLEKLMQTRV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEECCCHHHHCCHHHHHHHHHHH RNLMTQSPAAHQEG HHHHHCCCCCCCCC >Mature Secondary Structure TEQNTPSAPVEEPTPVADSPKPPDANQRKGKNTGPILGAIAIVLVIALGAGGYYHTHRQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH AQQLISANQNLQQQLEALKQSQQQEKNALEGLLQQQGKTLDAADREQATLTRQLSELQEK HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH VAIISGSDAKTWLLAQADFLVKMAGRKLWSDQDVTTAAALLKSADASLADMNDPSLLEVR HHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHCCCCCHHHHHH RAITEDVSTLSTLTQVDFDGIILKTNQLSNQVDNLRLADNDSDEAPMDQDSGELSSSISE HHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCEECCCCCCCCCCCCCCHHHHHHHHH WRQNLTKSWHNFMADFITVRRRDSSAEPLLAPNQDIYLRENIRSRLLVAAQAIPRHQNEV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCHHHHH YKQSLETISTWIRAYFDTTDPATKAFLEELDALSQQSITMDVPDQLKSQPLLEKLMQTRV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEECCCHHHHCCHHHHHHHHHHH RNLMTQSPAAHQEG HHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3062586; 3054815; 1379743; 9278503; 9298646 [H]