| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is uhpB [H]
Identifier: 157368382
GI number: 157368382
Start: 141667
End: 143208
Strand: Direct
Name: uhpB [H]
Synonym: Spro_0133
Alternate gene names: 157368382
Gene position: 141667-143208 (Clockwise)
Preceding gene: 157368381
Following gene: 157368383
Centisome position: 2.6
GC content: 61.48
Gene sequence:
>1542_bases ATGCAACGCCTGATCACCCAACTGGCGTTGTTCTTTATCTATGCCACCAGTGCATTTTGCCTGTGGGGGATTGGCACCGC GCTGATCGACCCGCCGTGGCAGGCGTTGTTGCTGTTCCCGTTTGGTCTGCGTATGGGCATTCTGCTGCAAAGCCCTTACC GCTTCTGGCCGGGCATCCTGTTGGCCGACCTACTGCTGATGGTGGTGTTGGCCGATCAGTTCGGTTACGGGCCGGCACTG TGGGCTTCGGTGGTGGTGCTGCTACTGACGGTGTTGCTTAGCCTGGTGGCCTCCCCCTGGTTGCTGCGGCATCAGGAAAG TGACAGCGAATGGCAATGGCCATTGATGCAGGGCGCGGTAGTGGCGGTGGCCGCGTTGCTGCAGGCGCTGGTGTGGCAGT TAGTGAACGGCGAGGGTGCCCGTGCGCTGCTGCTCGGGTTGGCTGGCGGTTTTACCATTGCCCCAACCTGTCTGCTGCTG TGGCACTATCTGGCGCGGCAGATCTGGGTGCCGCTTGAACCGGGCCTGATCCATAAGCCGGTGACGCTAAGGTTGCGCCA TCTGGCCAGCTATTTGCTGCTGTTTGCGCTCAGTATCTGGCTGCAACAGCAGGTTAATGCCGCTGAGCTGCGTCGCTTCG CGCCGTTTTGTCTGGCCATCCCGATAGTCTTTATGTCCTATCGCTACGGCTGGCAGGGCGCGCTGTTGGCAACCTTGCTT AATGGGGTGGTGCTGGTAGCCAACGAACCGCCACAGCCCGAATCGCACCGTGATTTACTGTTGTCGCTGCTGGCCCAGAG CCTGACCGGTCTGTTGCTCGGCGCGGGTATTCAACGCCAGCGCGAGCTGAACCAGCAACTGCGGCTGCGGCTGACGGAAA ACCGCCAACTGGCGCGCGCGCTGGTCACGGCAGAAGAACAGACCCGGCGCGAGGTGGCGCGGGAGCTGCACGACGAGGTC GGTCAAACCATCACCGTGATCCGCACCCAGGCCAGTATTATCAAGCGTTTGGCACCGCAGCCGCAGGTGATGGGCTGCGC CGAGGCGATAGATACCCTGGCGCTGCGGGTGTATGACGGCGTCCACGACGTGTTGACGCAACTGTGGCCGGCTGCGTTGA ATAATTTGCCGCTGTCGGCGGCGGTGGCGGCGATGCTGCGCGAATCGCTGCCGCAGGATACGTCGCTGGTGAGCGTGATG CAGTGGCAGGTACCGGATGAGTTGCTGGATGAGACGTTGAAAATTACGCTGTATCGGGTGTGTCAGGAAGGGGTGACCAA TGTCTGTCGTCACGCCACCGCCAGCCGGATTGAGCTGGATGCACGTCTTCGTCAGCGCAAAGGGCGGTTGCCGCAAGTCT TGCTGACCATTCGCGATAACGGCGTCGGTATCGATCTGGCCCATCATGAGCCGGGTTATGGTCTGCGCGGCATGCAGGAG CGCATCAGTGCGCTGGGCGGCCGCCTGCGGCTGACGTCGGAGAATGGCACCTGTTTGAATGTGATCTTACCCACAGTTTC ACCGGCGGAAGGGCCAAACTAG
Upstream 100 bases:
>100_bases GGCTGTCACCCAAAACGGTACACGTGCATCGCGCCAATCTGTTCGCCAAGCTGGGTATCAACAACAACGTCGAGCTGGCG AAGCGGATGCTGAACCTGTG
Downstream 100 bases:
>100_bases GAAATACTCCTAGCCGCGTCGGGAATCCGGCGTAAGTCATTTTCGCGCGCGCGCAGCATGATAGCGGCACTTTTCATATT CTCTGAGGTTTCACATGTGG
Product: sensory histidine kinase UhpB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 513; Mature: 513
Protein sequence:
>513_residues MQRLITQLALFFIYATSAFCLWGIGTALIDPPWQALLLFPFGLRMGILLQSPYRFWPGILLADLLLMVVLADQFGYGPAL WASVVVLLLTVLLSLVASPWLLRHQESDSEWQWPLMQGAVVAVAALLQALVWQLVNGEGARALLLGLAGGFTIAPTCLLL WHYLARQIWVPLEPGLIHKPVTLRLRHLASYLLLFALSIWLQQQVNAAELRRFAPFCLAIPIVFMSYRYGWQGALLATLL NGVVLVANEPPQPESHRDLLLSLLAQSLTGLLLGAGIQRQRELNQQLRLRLTENRQLARALVTAEEQTRREVARELHDEV GQTITVIRTQASIIKRLAPQPQVMGCAEAIDTLALRVYDGVHDVLTQLWPAALNNLPLSAAVAAMLRESLPQDTSLVSVM QWQVPDELLDETLKITLYRVCQEGVTNVCRHATASRIELDARLRQRKGRLPQVLLTIRDNGVGIDLAHHEPGYGLRGMQE RISALGGRLRLTSENGTCLNVILPTVSPAEGPN
Sequences:
>Translated_513_residues MQRLITQLALFFIYATSAFCLWGIGTALIDPPWQALLLFPFGLRMGILLQSPYRFWPGILLADLLLMVVLADQFGYGPAL WASVVVLLLTVLLSLVASPWLLRHQESDSEWQWPLMQGAVVAVAALLQALVWQLVNGEGARALLLGLAGGFTIAPTCLLL WHYLARQIWVPLEPGLIHKPVTLRLRHLASYLLLFALSIWLQQQVNAAELRRFAPFCLAIPIVFMSYRYGWQGALLATLL NGVVLVANEPPQPESHRDLLLSLLAQSLTGLLLGAGIQRQRELNQQLRLRLTENRQLARALVTAEEQTRREVARELHDEV GQTITVIRTQASIIKRLAPQPQVMGCAEAIDTLALRVYDGVHDVLTQLWPAALNNLPLSAAVAAMLRESLPQDTSLVSVM QWQVPDELLDETLKITLYRVCQEGVTNVCRHATASRIELDARLRQRKGRLPQVLLTIRDNGVGIDLAHHEPGYGLRGMQE RISALGGRLRLTSENGTCLNVILPTVSPAEGPN >Mature_513_residues MQRLITQLALFFIYATSAFCLWGIGTALIDPPWQALLLFPFGLRMGILLQSPYRFWPGILLADLLLMVVLADQFGYGPAL WASVVVLLLTVLLSLVASPWLLRHQESDSEWQWPLMQGAVVAVAALLQALVWQLVNGEGARALLLGLAGGFTIAPTCLLL WHYLARQIWVPLEPGLIHKPVTLRLRHLASYLLLFALSIWLQQQVNAAELRRFAPFCLAIPIVFMSYRYGWQGALLATLL NGVVLVANEPPQPESHRDLLLSLLAQSLTGLLLGAGIQRQRELNQQLRLRLTENRQLARALVTAEEQTRREVARELHDEV GQTITVIRTQASIIKRLAPQPQVMGCAEAIDTLALRVYDGVHDVLTQLWPAALNNLPLSAAVAAMLRESLPQDTSLVSVM QWQVPDELLDETLKITLYRVCQEGVTNVCRHATASRIELDARLRQRKGRLPQVLLTIRDNGVGIDLAHHEPGYGLRGMQE RISALGGRLRLTSENGTCLNVILPTVSPAEGPN
Specific function: Member of the two-component regulatory system uhpB/uhpA involved in the regulation of the uptake of hexose phosphates. UhpB functions as a membrane-associated protein kinase that phosphorylates uhpA in response to environmental signals [H]
COG id: COG3851
COG function: function code T; Signal transduction histidine kinase, glucose-6-phosphate specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI87082311, Length=507, Percent_Identity=46.5483234714004, Blast_Score=350, Evalue=9e-98, Organism=Escherichia coli, GI1788812, Length=193, Percent_Identity=30.0518134715026, Blast_Score=72, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR007895 - InterPro: IPR011712 - InterPro: IPR005467 [H]
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3; PF05231 MASE1 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 56968; Mature: 56968
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRLITQLALFFIYATSAFCLWGIGTALIDPPWQALLLFPFGLRMGILLQSPYRFWPGIL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHCHHHH LADLLLMVVLADQFGYGPALWASVVVLLLTVLLSLVASPWLLRHQESDSEWQWPLMQGAV HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHH VAVAALLQALVWQLVNGEGARALLLGLAGGFTIAPTCLLLWHYLARQIWVPLEPGLIHKP HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH VTLRLRHLASYLLLFALSIWLQQQVNAAELRRFAPFCLAIPIVFMSYRYGWQGALLATLL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH NGVVLVANEPPQPESHRDLLLSLLAQSLTGLLLGAGIQRQRELNQQLRLRLTENRQLARA CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHH LVTAEEQTRREVARELHDEVGQTITVIRTQASIIKRLAPQPQVMGCAEAIDTLALRVYDG HHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VHDVLTQLWPAALNNLPLSAAVAAMLRESLPQDTSLVSVMQWQVPDELLDETLKITLYRV HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH CQEGVTNVCRHATASRIELDARLRQRKGRLPQVLLTIRDNGVGIDLAHHEPGYGLRGMQE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCCCCCCHHH RISALGGRLRLTSENGTCLNVILPTVSPAEGPN HHHHCCCEEEEECCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MQRLITQLALFFIYATSAFCLWGIGTALIDPPWQALLLFPFGLRMGILLQSPYRFWPGIL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHCHHHH LADLLLMVVLADQFGYGPALWASVVVLLLTVLLSLVASPWLLRHQESDSEWQWPLMQGAV HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHH VAVAALLQALVWQLVNGEGARALLLGLAGGFTIAPTCLLLWHYLARQIWVPLEPGLIHKP HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH VTLRLRHLASYLLLFALSIWLQQQVNAAELRRFAPFCLAIPIVFMSYRYGWQGALLATLL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH NGVVLVANEPPQPESHRDLLLSLLAQSLTGLLLGAGIQRQRELNQQLRLRLTENRQLARA CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHH LVTAEEQTRREVARELHDEVGQTITVIRTQASIIKRLAPQPQVMGCAEAIDTLALRVYDG HHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VHDVLTQLWPAALNNLPLSAAVAAMLRESLPQDTSLVSVMQWQVPDELLDETLKITLYRV HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH CQEGVTNVCRHATASRIELDARLRQRKGRLPQVLLTIRDNGVGIDLAHHEPGYGLRGMQE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCCCCCCHHH RISALGGRLRLTSENGTCLNVILPTVSPAEGPN HHHHCCCEEEEECCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3301805; 1569007; 7686882; 9278503 [H]