Click here to switch to the map view.

The map label for this gene is yeaM [C]

Identifier: 157368343

GI number: 157368343

Start: 100107

End: 101030

Strand: Reverse

Name: yeaM [C]

Synonym: Spro_0094

Alternate gene names: 157368343

Gene position: 101030-100107 (Counterclockwise)

Preceding gene: 157368344

Following gene: 157368341

Centisome position: 1.85

GC content: 63.64

Gene sequence:

>924_bases
ATGCCGCAGGCCGTCTACTTTCTGATGTTGCCCCAGGTGCTGTCGCTGGACGTTAGCGGCCCGGCCGAAACCCTGCGCCT
GGCCGGGCAGTTCGGCCTGCACTACATCAGCCCAGTGCCGCAGGTTACCTGCTCGGTTGGCATGACGTTGAGTCAGCTAC
AGCCGCTGCCCGACCGGCTGGAAGACGGCGCTATTTTAGTGGTGCCGGGCGTCAGTGATTCGCAACATTTCTTCGCCAAT
GGGCCGGCCGAACAGGCCCGCCGCTGGCTGGCCGCGCTGCAACCCGACCTGCAACAGCAACGTATCACGCTGGTTTGTGT
CTGTTCCGGCGCCCTGCTGGCGGCACAGGCCGGTTTGCTCGACGGTTACCAGTGCACCACCCATCACGACGTGATTGAAC
GCATGCGCCAGCAGGCCCCGGCAGCGCAGGTGAAAGAAAACCGCATCTTTGTTGAAGACCGCAGCGTTTACACCAGCGCC
GGCATCACCGCCGGGATCGATCTGGCGTTGCACCTGATTAATCGCCAATGCGGCGCTAGCCGGGCGATGGAGATTGCCCG
GGAAATGGTGGTGTATTTTCGCCGGTCCGGCGACGACCCGCAGCTTTCACCCTGGCTTCGCTACCGTAACCATCTGCACC
CGGCGGTGCACCGGGCGCAAGACGTGATGGCTGCCGAGCCGGAAGCGGAATGGTCAGTACCGCAGGTGGCGGAAAAGGCC
CATGTCAGCAGCCGCCATCTGGCACGGCTATTCCGCAGCCATGTTGGCATCAGCGTGCGTGAGTACCATGAACAATTACG
GCTGGCGGTGGCGCAGCAGCGCCTGCAGCAAGGCTATGGGCTGGAGAAAGCGGCGTTGGCCGCGGGATTTTCCTCCGGCC
GCCAACTGCGCCGTGCCCAGCAGCGCGGCTCAATCGGCTTATGA

Upstream 100 bases:

>100_bases
CCGAACAACTCAAGCGGCATACTGAGACGGTGCTGGTCGACCGCTTCGCCCGCATCGCCAGCGTGGATGAGGCTCTGGCG
CAACTCTCACAGGAGTAACC

Downstream 100 bases:

>100_bases
CACCAACCGTCGAGTGTCTATTTTCTGCAGGCCTATCGACAGCAGCAGGCTAAGCGCCAGCGCCACGCCAAACACCCAGA
AGATATCCAGTAACGGATGA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator AraC Family; AraC Family Transcription Regulator; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator DarR; Transcription Regulator; AraC-Family Transcriptional Regulator; ThiJ/PfpI Domain-Containing Protein; Transcriptional Regulator Protein; DJ-1/PfpI Family; AraC Family Regulatory Protein; AraC Family Regulatory Helix-Turn-Helix Protein; AraC Family Regulatory Helix-Turn-Helix; Transcription Regulator Protein; Transcriptional Regulatory Protein; HTH-Type Transcriptional Regulator GlxA; Transcriptional Regulator AraC-Family Protein; AraC Family Transcription Regulator Protein; AraC-Like Protein; Transcriptional Regulator Protein AraC Family; Regulatory Protein; ADPA-Family Transcriptional Regulator; Fis Family Transcriptional Regulator; ADPA Family Transcriptional Regulator

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MPQAVYFLMLPQVLSLDVSGPAETLRLAGQFGLHYISPVPQVTCSVGMTLSQLQPLPDRLEDGAILVVPGVSDSQHFFAN
GPAEQARRWLAALQPDLQQQRITLVCVCSGALLAAQAGLLDGYQCTTHHDVIERMRQQAPAAQVKENRIFVEDRSVYTSA
GITAGIDLALHLINRQCGASRAMEIAREMVVYFRRSGDDPQLSPWLRYRNHLHPAVHRAQDVMAAEPEAEWSVPQVAEKA
HVSSRHLARLFRSHVGISVREYHEQLRLAVAQQRLQQGYGLEKAALAAGFSSGRQLRRAQQRGSIGL

Sequences:

>Translated_307_residues
MPQAVYFLMLPQVLSLDVSGPAETLRLAGQFGLHYISPVPQVTCSVGMTLSQLQPLPDRLEDGAILVVPGVSDSQHFFAN
GPAEQARRWLAALQPDLQQQRITLVCVCSGALLAAQAGLLDGYQCTTHHDVIERMRQQAPAAQVKENRIFVEDRSVYTSA
GITAGIDLALHLINRQCGASRAMEIAREMVVYFRRSGDDPQLSPWLRYRNHLHPAVHRAQDVMAAEPEAEWSVPQVAEKA
HVSSRHLARLFRSHVGISVREYHEQLRLAVAQQRLQQGYGLEKAALAAGFSSGRQLRRAQQRGSIGL
>Mature_306_residues
PQAVYFLMLPQVLSLDVSGPAETLRLAGQFGLHYISPVPQVTCSVGMTLSQLQPLPDRLEDGAILVVPGVSDSQHFFANG
PAEQARRWLAALQPDLQQQRITLVCVCSGALLAAQAGLLDGYQCTTHHDVIERMRQQAPAAQVKENRIFVEDRSVYTSAG
ITAGIDLALHLINRQCGASRAMEIAREMVVYFRRSGDDPQLSPWLRYRNHLHPAVHRAQDVMAAEPEAEWSVPQVAEKAH
VSSRHLARLFRSHVGISVREYHEQLRLAVAQQRLQQGYGLEKAALAAGFSSGRQLRRAQQRGSIGL

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33934; Mature: 33803

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQAVYFLMLPQVLSLDVSGPAETLRLAGQFGLHYISPVPQVTCSVGMTLSQLQPLPDRL
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHCCCCCHHHHHHCCCHHHCCCCCHHH
EDGAILVVPGVSDSQHFFANGPAEQARRWLAALQPDLQQQRITLVCVCSGALLAAQAGLL
CCCEEEEECCCCCCCCEECCCCHHHHHHHHHHHCCCHHHCCEEEEEEECCHHHHHHHCCC
DGYQCTTHHDVIERMRQQAPAAQVKENRIFVEDRSVYTSAGITAGIDLALHLINRQCGAS
CCCCCCHHHHHHHHHHHHCCHHHHHCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHCHH
RAMEIAREMVVYFRRSGDDPQLSPWLRYRNHLHPAVHRAQDVMAAEPEAEWSVPQVAEKA
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
HVSSRHLARLFRSHVGISVREYHEQLRLAVAQQRLQQGYGLEKAALAAGFSSGRQLRRAQ
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
QRGSIGL
HCCCCCC
>Mature Secondary Structure 
PQAVYFLMLPQVLSLDVSGPAETLRLAGQFGLHYISPVPQVTCSVGMTLSQLQPLPDRL
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHCCCCCHHHHHHCCCHHHCCCCCHHH
EDGAILVVPGVSDSQHFFANGPAEQARRWLAALQPDLQQQRITLVCVCSGALLAAQAGLL
CCCEEEEECCCCCCCCEECCCCHHHHHHHHHHHCCCHHHCCEEEEEEECCHHHHHHHCCC
DGYQCTTHHDVIERMRQQAPAAQVKENRIFVEDRSVYTSAGITAGIDLALHLINRQCGAS
CCCCCCHHHHHHHHHHHHCCHHHHHCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHCHH
RAMEIAREMVVYFRRSGDDPQLSPWLRYRNHLHPAVHRAQDVMAAEPEAEWSVPQVAEKA
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
HVSSRHLARLFRSHVGISVREYHEQLRLAVAQQRLQQGYGLEKAALAAGFSSGRQLRRAQ
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
QRGSIGL
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA