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The map label for this gene is fdhD [H]

Identifier: 157368331

GI number: 157368331

Start: 86032

End: 86868

Strand: Reverse

Name: fdhD [H]

Synonym: Spro_0082

Alternate gene names: 157368331

Gene position: 86868-86032 (Counterclockwise)

Preceding gene: 157368341

Following gene: 157368330

Centisome position: 1.59

GC content: 56.75

Gene sequence:

>837_bases
GTGAACAATATAAACCCAGACCAACATATCAATGATATCAATGAGACCTTGCTCACAGGGGTGACCCGGTCCCAGGTGTA
TCAACGCGGGCAACTCGCCACCGCACAGCAGGATTGGCTGGCGGAAGAAGTCCCGGTCGCACTGGTCTATAACGGCATTT
CTCACGTGGTGATGATGTGCACCCCCAAAGATCTGGAGGCGTTCGCCCTGGGTTTTTCCCTGTCTGAAGGCATCATCGAG
TCACCGCGCGATATTTACAGTATAGAGATTAACCAAACTTGTAACGGGCTGGAGGTGCAAATTGAGCTTTCCAGCCGTCG
CTTTGCCGGTTTGAAAGAGCGCCGCCGTGCCATGGCGGGCCGCACCGGCTGTGGCGTGTGCGGTATCGAGCAGTTGGCAG
ATATTTTTCGCCCGCTGCCTGCACTGCCGTTTACCCAGACCTTTTCCCTCACCAATCTTGACTCTGCATTGAAACAACTG
CGAGAAGTGCAGAAAGTTGGGCAACTGACCGGTTGCACCCATGCCGCCGCCTGGTTGTCGCCACAAGGGGAATTACTCGG
CGGGTGTGAAGATGTGGGCCGTCATGTCGCCCTGGATAAGCTGCTCGGCGTACGCGCCAAACAGGGCTGGCAGCAGGGTG
CGGTATTAACTTCCAGCCGCGCCAGCTATGAAATGGTGCAAAAATCCGCCATGTGCGGCGTCGAGATCCTGTTTGTGGTT
TCTGCCGCCACCTCACTGGCAGTGGAAATCGCCGAGCGCAGCAACCTGACGCTGGTCGGCTTCAGCAAACCCGGCCGTGC
CACGGTGTTTACCCATCCGCAGCGCATTGTGGATTAA

Upstream 100 bases:

>100_bases
GCTTTCCCCCTGGAAGCGGGAAGCGCTAAAATTACTGTTGTTTTTACGCGGCAATATTACCACAGCGTATATGTGGTTGT
TACAAACAGGTGCCACTTAA

Downstream 100 bases:

>100_bases
CCCACAAAGACCACATAATAAGTAGGGCATTGATAATCATTTTCAATATCATTTAAATAACTATAATGATCCGACTGCTT
ACGCGGTGCTCACATAATGC

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MNNINPDQHINDINETLLTGVTRSQVYQRGQLATAQQDWLAEEVPVALVYNGISHVVMMCTPKDLEAFALGFSLSEGIIE
SPRDIYSIEINQTCNGLEVQIELSSRRFAGLKERRRAMAGRTGCGVCGIEQLADIFRPLPALPFTQTFSLTNLDSALKQL
REVQKVGQLTGCTHAAAWLSPQGELLGGCEDVGRHVALDKLLGVRAKQGWQQGAVLTSSRASYEMVQKSAMCGVEILFVV
SAATSLAVEIAERSNLTLVGFSKPGRATVFTHPQRIVD

Sequences:

>Translated_278_residues
MNNINPDQHINDINETLLTGVTRSQVYQRGQLATAQQDWLAEEVPVALVYNGISHVVMMCTPKDLEAFALGFSLSEGIIE
SPRDIYSIEINQTCNGLEVQIELSSRRFAGLKERRRAMAGRTGCGVCGIEQLADIFRPLPALPFTQTFSLTNLDSALKQL
REVQKVGQLTGCTHAAAWLSPQGELLGGCEDVGRHVALDKLLGVRAKQGWQQGAVLTSSRASYEMVQKSAMCGVEILFVV
SAATSLAVEIAERSNLTLVGFSKPGRATVFTHPQRIVD
>Mature_278_residues
MNNINPDQHINDINETLLTGVTRSQVYQRGQLATAQQDWLAEEVPVALVYNGISHVVMMCTPKDLEAFALGFSLSEGIIE
SPRDIYSIEINQTCNGLEVQIELSSRRFAGLKERRRAMAGRTGCGVCGIEQLADIFRPLPALPFTQTFSLTNLDSALKQL
REVQKVGQLTGCTHAAAWLSPQGELLGGCEDVGRHVALDKLLGVRAKQGWQQGAVLTSSRASYEMVQKSAMCGVEILFVV
SAATSLAVEIAERSNLTLVGFSKPGRATVFTHPQRIVD

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=265, Percent_Identity=74.3396226415094, Blast_Score=404, Evalue=1e-114,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 30286; Mature: 30286

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNINPDQHINDINETLLTGVTRSQVYQRGQLATAQQDWLAEEVPVALVYNGISHVVMMC
CCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHCCHHEEECCHHHEEEEE
TPKDLEAFALGFSLSEGIIESPRDIYSIEINQTCNGLEVQIELSSRRFAGLKERRRAMAG
CCCCHHHHHHCCHHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCCHHCCHHHHHHHHCC
RTGCGVCGIEQLADIFRPLPALPFTQTFSLTNLDSALKQLREVQKVGQLTGCTHAAAWLS
CCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCC
PQGELLGGCEDVGRHVALDKLLGVRAKQGWQQGAVLTSSRASYEMVQKSAMCGVEILFVV
CCCHHCCCHHHHHHHHHHHHHHHHHHHCCHHCCCEEECCCHHHHHHHHHHHCCHHHHHHH
SAATSLAVEIAERSNLTLVGFSKPGRATVFTHPQRIVD
HHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCHHHCC
>Mature Secondary Structure
MNNINPDQHINDINETLLTGVTRSQVYQRGQLATAQQDWLAEEVPVALVYNGISHVVMMC
CCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHCCHHEEECCHHHEEEEE
TPKDLEAFALGFSLSEGIIESPRDIYSIEINQTCNGLEVQIELSSRRFAGLKERRRAMAG
CCCCHHHHHHCCHHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCCHHCCHHHHHHHHCC
RTGCGVCGIEQLADIFRPLPALPFTQTFSLTNLDSALKQLREVQKVGQLTGCTHAAAWLS
CCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCC
PQGELLGGCEDVGRHVALDKLLGVRAKQGWQQGAVLTSSRASYEMVQKSAMCGVEILFVV
CCCHHCCCHHHHHHHHHHHHHHHHHHHCCHHCCCEEECCCHHHHHHHHHHHCCHHHHHHH
SAATSLAVEIAERSNLTLVGFSKPGRATVFTHPQRIVD
HHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA