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The map label for this gene is sodA [H]

Identifier: 157368330

GI number: 157368330

Start: 85281

End: 85901

Strand: Reverse

Name: sodA [H]

Synonym: Spro_0081

Alternate gene names: 157368330

Gene position: 85901-85281 (Counterclockwise)

Preceding gene: 157368331

Following gene: 157368329

Centisome position: 1.58

GC content: 54.27

Gene sequence:

>621_bases
ATGAGTTACTCACTGCCATCCCTGCCGTACGCCTACGACGCACTGGAACCGCATTTCGACAAGCAGACGATGGAAATCCA
TCACACCAAACATCACCAGACTTACGTTAACAACGCCAACACCGTGCTGGAAGCTTACCCAGAACTGGCTCAATACAGCG
TTGAAGACCTGATCCAGGATCTGGATAAAGTGCCTGCTGACAAGCGCACCTTCATGCGTAACAACGCCGGCGGCCACGCT
AACCACAGCCTGTTCTGGAAAGGCCTGAAAATCGGCACCACTCTGGGTGGCGATCTGAAAGCGGCTATCGAACGTGATTT
CGGCAGCGTTGAGAAATTCCAGGAAGAGTTCGAGAAAGCCGCAGCGACCCGCTTCGGTTCAGGTTGGGCCTGGCTGGTAC
TGAAAGGCGACAAACTGGCTGTAGTGTCTACTGCTAACCAGGACAGCCCGCTGATGGGCGAAGCCGTTGCCGGCGCTTCA
GGCTTCCCAATCGTGGGCCTGGACGTGTGGGAACACGCTTACTACCTGAAATATCAAAACAAACGTCCAGACTACATCAA
GGCATTCTGGAACGTGGTTAACTGGGATGAAGCGGCAGCACGCTTCGCTGCGAAGAAGTAA

Upstream 100 bases:

>100_bases
TGATAATCATTTTCAATATCATTTAAATAACTATAATGATCCGACTGCTTACGCGGTGCTCACATAATGCGCCGCCCCTA
TACCATTGGAGATGATGATC

Downstream 100 bases:

>100_bases
TTCGCCCCCAGAAATGAAGATACCCGCTTGATGCGGGTATTTTTTTGACCAAAATTCGCTAAAGTTTGACCGTTCTTTGC
CGATGGTTTGTTCAATTGAC

Product: superoxide dismutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MSYSLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANTVLEAYPELAQYSVEDLIQDLDKVPADKRTFMRNNAGGHA
NHSLFWKGLKIGTTLGGDLKAAIERDFGSVEKFQEEFEKAAATRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAVAGAS
GFPIVGLDVWEHAYYLKYQNKRPDYIKAFWNVVNWDEAAARFAAKK

Sequences:

>Translated_206_residues
MSYSLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANTVLEAYPELAQYSVEDLIQDLDKVPADKRTFMRNNAGGHA
NHSLFWKGLKIGTTLGGDLKAAIERDFGSVEKFQEEFEKAAATRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAVAGAS
GFPIVGLDVWEHAYYLKYQNKRPDYIKAFWNVVNWDEAAARFAAKK
>Mature_205_residues
SYSLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANTVLEAYPELAQYSVEDLIQDLDKVPADKRTFMRNNAGGHAN
HSLFWKGLKIGTTLGGDLKAAIERDFGSVEKFQEEFEKAAATRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAVAGASG
FPIVGLDVWEHAYYLKYQNKRPDYIKAFWNVVNWDEAAARFAAKK

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG0605

COG function: function code P; Superoxide dismutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron/manganese superoxide dismutase family [H]

Homologues:

Organism=Homo sapiens, GI67782307, Length=208, Percent_Identity=45.1923076923077, Blast_Score=179, Evalue=1e-45,
Organism=Homo sapiens, GI67782305, Length=208, Percent_Identity=45.1923076923077, Blast_Score=179, Evalue=1e-45,
Organism=Homo sapiens, GI67782309, Length=207, Percent_Identity=39.6135265700483, Blast_Score=147, Evalue=5e-36,
Organism=Escherichia coli, GI1790342, Length=206, Percent_Identity=85.4368932038835, Blast_Score=376, Evalue=1e-106,
Organism=Escherichia coli, GI1787946, Length=207, Percent_Identity=42.512077294686, Blast_Score=159, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17506561, Length=204, Percent_Identity=44.1176470588235, Blast_Score=162, Evalue=9e-41,
Organism=Caenorhabditis elegans, GI17569479, Length=203, Percent_Identity=40.8866995073892, Blast_Score=155, Evalue=1e-38,
Organism=Saccharomyces cerevisiae, GI6321796, Length=217, Percent_Identity=42.3963133640553, Blast_Score=153, Evalue=2e-38,
Organism=Drosophila melanogaster, GI17136812, Length=207, Percent_Identity=44.4444444444444, Blast_Score=167, Evalue=3e-42,

Paralogues:

None

Copy number: 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001189
- InterPro:   IPR019833
- InterPro:   IPR019832
- InterPro:   IPR019831 [H]

Pfam domain/function: PF02777 Sod_Fe_C; PF00081 Sod_Fe_N [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 23157; Mature: 23026

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00088 SOD_MN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYSLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANTVLEAYPELAQYSVEDLIQD
CCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LDKVPADKRTFMRNNAGGHANHSLFWKGLKIGTTLGGDLKAAIERDFGSVEKFQEEFEKA
HHHCCCCHHHHHHCCCCCCCCCCEEEECEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHH
AATRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAVAGASGFPIVGLDVWEHAYYLKYQN
HHHHCCCCEEEEEEECCEEEEEEECCCCCCCCHHHHCCCCCCCEEEHHHHHHEEEEEECC
KRPDYIKAFWNVVNWDEAAARFAAKK
CCCHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure 
SYSLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANTVLEAYPELAQYSVEDLIQD
CCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LDKVPADKRTFMRNNAGGHANHSLFWKGLKIGTTLGGDLKAAIERDFGSVEKFQEEFEKA
HHHCCCCHHHHHHCCCCCCCCCCEEEECEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHH
AATRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAVAGASGFPIVGLDVWEHAYYLKYQN
HHHHCCCCEEEEEEECCEEEEEEECCCCCCCCHHHHCCCCCCCEEEHHHHHHEEEEEECC
KRPDYIKAFWNVVNWDEAAARFAAKK
CCCHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353054 [H]