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The map label for this gene is yjiR [H]

Identifier: 157368325

GI number: 157368325

Start: 79630

End: 81096

Strand: Direct

Name: yjiR [H]

Synonym: Spro_0076

Alternate gene names: 157368325

Gene position: 79630-81096 (Clockwise)

Preceding gene: 157368323

Following gene: 157368326

Centisome position: 1.46

GC content: 60.6

Gene sequence:

>1467_bases
GTGACCTTGCTCGATGAAATGCCGGAAACGCGCTACCAGCAGCTGGCGGATACGCTGGCAGAAGCCATACGCCGCGGCAC
GCTGCTACCCGGAAGCCGTTTACCTTCGGTGCGCCGCTGTGCGCAGAGCCACAGCGTCAGTATCAATACCGTGGTGGCGG
CTTACCGCACGCTGGAAGATCGCGGGCTGATAGAGGCACGGCCACAGTCCGGTTTTTATGTGTGTAACACCTTACCGGCG
CTGAAGGCCGCTTCACCGACCAGCAGCCGAATAGAGCCACCGGCGGATGACGTACTGGCGTTGATCGACACGGTGTTTGC
CGCTCAGCAAAACCCGGCGTTCACCAATCTTTCGCTGGCCTGCCCGCAGACTTCTGATTTCTATCCCGGCGGCAAGTTGG
GGCGGATGCTGTCGTCGCAGTTACGCCGTCAGCCGAATCTGATTGGCCAGTACGCGCTGCCACCCGGCAGCCTGCGGCTA
CGACAGCAAATCACTCGTCGTTCGATGGCGCTGGGCATGCTGCTGGAGCCCGGCGATATCACGCTGACTCATGGCTGCAT
GGAGGCGCTGCAACTGGCGCTGCGGGTGACCACCAAACCGGGTGATTGTATCGGCCTGGAATCACCGACCTATTTTTATC
TGCTGCCGCTGCTGGCCAGCCTGGGGCTGAAGGCGCTGGAAATTCCTACCGATCCGCAGCACGGGCTGTCGCTGGATGCG
CTGGAGCTGTTGCTCAATGAGAAGCGGCTGAATGCGGTGATTGCCATGCCGACGGTGCAAAACCCGCTGGGCTGCACCAT
GCCGCTGGCGGCTAAAAAACGGTTGGCGCGGTTGATGAACGATCATCAGGTACCCTTGATTGAAGATGGGTTGTACGCCG
AGCTGCAATTTGGCAATGCGCTGTCCCCGGCGGTAAAATCTTTCGATCGTGACGGTTGGGTGTTGTTCTGCTCCAGCTTT
ACCAAGACCCTGGCACCGGACTTCCGCATCGGTTGGATCAGCGGTGGCCGCTTTAACGAGGCGTTGCGCAAACTGAAGGC
GGTGTCGTCGATGTCCGAGTCGCAGCTGCTGTCGGAAACCCTGGCGATGTTTCTGGAAACCGGCGGCTACGATCACCATC
TGCGCAACCTGCGAAAACGCTACGCCGCTCAGGTGGATGAGGCGCGGGCGCTGATTGCGCGTCATTTCCCACGTGGTACC
CGGGCGACACAACCCGCGGGCGGTTTTGTATTCTGGGTGGAGTTCCCGGTCGGGGTCGACAGCGTAGCGCTATTCCATCA
GATGCTGGAGGAACAGATTTGCCTGACGCCCGGCACGCTGTATTCCCCCAGTGGCCGCTATCGTAACGCGTTGCGGCTTT
CCTGCTGCTACCCGTTTAATGCCCGTTACAGCCAGGCACTGGCACGTGTCGGTGCCAAAGCCTGCGAGATGAGCGGCTTG
CCGCCGGGCATTGCGCAAGACGAGTAA

Upstream 100 bases:

>100_bases
ATAAAACCTACGGGCAGATGGTGACAGAACCAAAAACCCGCTATTGTCATGGATACAGTTGTAGCAAATTCAAACTGTAC
CCATTACCTGGAGACAAACT

Downstream 100 bases:

>100_bases
CCACGCGCGCATTTTGCTACAATGTGGACATCATTGATTAGCGTGCCGTATCGGCACAACAGGCCAGAAACCATGAAAGA
AATAGAAAAGGCAGAGATTA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 487

Protein sequence:

>488_residues
MTLLDEMPETRYQQLADTLAEAIRRGTLLPGSRLPSVRRCAQSHSVSINTVVAAYRTLEDRGLIEARPQSGFYVCNTLPA
LKAASPTSSRIEPPADDVLALIDTVFAAQQNPAFTNLSLACPQTSDFYPGGKLGRMLSSQLRRQPNLIGQYALPPGSLRL
RQQITRRSMALGMLLEPGDITLTHGCMEALQLALRVTTKPGDCIGLESPTYFYLLPLLASLGLKALEIPTDPQHGLSLDA
LELLLNEKRLNAVIAMPTVQNPLGCTMPLAAKKRLARLMNDHQVPLIEDGLYAELQFGNALSPAVKSFDRDGWVLFCSSF
TKTLAPDFRIGWISGGRFNEALRKLKAVSSMSESQLLSETLAMFLETGGYDHHLRNLRKRYAAQVDEARALIARHFPRGT
RATQPAGGFVFWVEFPVGVDSVALFHQMLEEQICLTPGTLYSPSGRYRNALRLSCCYPFNARYSQALARVGAKACEMSGL
PPGIAQDE

Sequences:

>Translated_488_residues
MTLLDEMPETRYQQLADTLAEAIRRGTLLPGSRLPSVRRCAQSHSVSINTVVAAYRTLEDRGLIEARPQSGFYVCNTLPA
LKAASPTSSRIEPPADDVLALIDTVFAAQQNPAFTNLSLACPQTSDFYPGGKLGRMLSSQLRRQPNLIGQYALPPGSLRL
RQQITRRSMALGMLLEPGDITLTHGCMEALQLALRVTTKPGDCIGLESPTYFYLLPLLASLGLKALEIPTDPQHGLSLDA
LELLLNEKRLNAVIAMPTVQNPLGCTMPLAAKKRLARLMNDHQVPLIEDGLYAELQFGNALSPAVKSFDRDGWVLFCSSF
TKTLAPDFRIGWISGGRFNEALRKLKAVSSMSESQLLSETLAMFLETGGYDHHLRNLRKRYAAQVDEARALIARHFPRGT
RATQPAGGFVFWVEFPVGVDSVALFHQMLEEQICLTPGTLYSPSGRYRNALRLSCCYPFNARYSQALARVGAKACEMSGL
PPGIAQDE
>Mature_487_residues
TLLDEMPETRYQQLADTLAEAIRRGTLLPGSRLPSVRRCAQSHSVSINTVVAAYRTLEDRGLIEARPQSGFYVCNTLPAL
KAASPTSSRIEPPADDVLALIDTVFAAQQNPAFTNLSLACPQTSDFYPGGKLGRMLSSQLRRQPNLIGQYALPPGSLRLR
QQITRRSMALGMLLEPGDITLTHGCMEALQLALRVTTKPGDCIGLESPTYFYLLPLLASLGLKALEIPTDPQHGLSLDAL
ELLLNEKRLNAVIAMPTVQNPLGCTMPLAAKKRLARLMNDHQVPLIEDGLYAELQFGNALSPAVKSFDRDGWVLFCSSFT
KTLAPDFRIGWISGGRFNEALRKLKAVSSMSESQLLSETLAMFLETGGYDHHLRNLRKRYAAQVDEARALIARHFPRGTR
ATQPAGGFVFWVEFPVGVDSVALFHQMLEEQICLTPGTLYSPSGRYRNALRLSCCYPFNARYSQALARVGAKACEMSGLP
PGIAQDE

Specific function: Unknown

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI7705897, Length=283, Percent_Identity=25.0883392226148, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI33469970, Length=283, Percent_Identity=25.0883392226148, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI4507369, Length=327, Percent_Identity=24.1590214067278, Blast_Score=71, Evalue=3e-12,
Organism=Escherichia coli, GI1790797, Length=471, Percent_Identity=36.5180467091295, Blast_Score=297, Evalue=9e-82,
Organism=Escherichia coli, GI1787710, Length=462, Percent_Identity=35.7142857142857, Blast_Score=276, Evalue=1e-75,
Organism=Saccharomyces cerevisiae, GI6321236, Length=350, Percent_Identity=22.8571428571429, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 53594; Mature: 53462

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLDEMPETRYQQLADTLAEAIRRGTLLPGSRLPSVRRCAQSHSVSINTVVAAYRTLED
CCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHH
RGLIEARPQSGFYVCNTLPALKAASPTSSRIEPPADDVLALIDTVFAAQQNPAFTNLSLA
CCCEEECCCCCEEEEECCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEE
CPQTSDFYPGGKLGRMLSSQLRRQPNLIGQYALPPGSLRLRQQITRRSMALGMLLEPGDI
CCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHEEECCCCE
TLTHGCMEALQLALRVTTKPGDCIGLESPTYFYLLPLLASLGLKALEIPTDPQHGLSLDA
EEHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCHHH
LELLLNEKRLNAVIAMPTVQNPLGCTMPLAAKKRLARLMNDHQVPLIEDGLYAELQFGNA
HHHHHHHHHHCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCEEEEECCCC
LSPAVKSFDRDGWVLFCSSFTKTLAPDFRIGWISGGRFNEALRKLKAVSSMSESQLLSET
CCHHHHHCCCCCEEEEECHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
LAMFLETGGYDHHLRNLRKRYAAQVDEARALIARHFPRGTRATQPAGGFVFWVEFPVGVD
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHH
SVALFHQMLEEQICLTPGTLYSPSGRYRNALRLSCCYPFNARYSQALARVGAKACEMSGL
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCC
PPGIAQDE
CCCCCCCC
>Mature Secondary Structure 
TLLDEMPETRYQQLADTLAEAIRRGTLLPGSRLPSVRRCAQSHSVSINTVVAAYRTLED
CCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHH
RGLIEARPQSGFYVCNTLPALKAASPTSSRIEPPADDVLALIDTVFAAQQNPAFTNLSLA
CCCEEECCCCCEEEEECCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEE
CPQTSDFYPGGKLGRMLSSQLRRQPNLIGQYALPPGSLRLRQQITRRSMALGMLLEPGDI
CCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHEEECCCCE
TLTHGCMEALQLALRVTTKPGDCIGLESPTYFYLLPLLASLGLKALEIPTDPQHGLSLDA
EEHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCHHH
LELLLNEKRLNAVIAMPTVQNPLGCTMPLAAKKRLARLMNDHQVPLIEDGLYAELQFGNA
HHHHHHHHHHCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCEEEEECCCC
LSPAVKSFDRDGWVLFCSSFTKTLAPDFRIGWISGGRFNEALRKLKAVSSMSESQLLSET
CCHHHHHCCCCCEEEEECHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
LAMFLETGGYDHHLRNLRKRYAAQVDEARALIARHFPRGTRATQPAGGFVFWVEFPVGVD
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHH
SVALFHQMLEEQICLTPGTLYSPSGRYRNALRLSCCYPFNARYSQALARVGAKACEMSGL
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCC
PPGIAQDE
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]