| Definition | Escherichia coli HS, complete genome. |
|---|---|
| Accession | NC_009800 |
| Length | 4,643,538 |
Click here to switch to the map view.
The map label for this gene is yjgA [C]
Identifier: 157163708
GI number: 157163708
Start: 4492504
End: 4493055
Strand: Reverse
Name: yjgA [C]
Synonym: EcHS_A4487
Alternate gene names: 157163708
Gene position: 4493055-4492504 (Counterclockwise)
Preceding gene: 157163711
Following gene: 157163706
Centisome position: 96.76
GC content: 52.9
Gene sequence:
>552_bases ATGACTAAGCAGCCCGAAGACTGGCTCGACGACGTTCCCGGTGATGACATCGAAGACGAAGACGATGAAATTATCTGGGT CAGTAAAAGTGAAATTAAACGTGATGCCGAGGAGCTAAAACGCCTTGGCGCGGAAATTGTTGATCTGGGGAAAAACGCGC TGGATAAGATCCCGTTAGATGCGGATCTGCGCGCGGCTATTGAGCTCGCCCAGCGTATTAAGATGGAAGGTCGCCGCCGC CAGTTGCAGCTCATCGGTAAGATGCTGCGCCAGCGCGACGTAGAGCCTATTCGTCAGGCGCTGGATAAGCTGAAAAACCG TCACAACCAGCAGGTGGTGCTGTTCCATAAACTGGAAAACCTGCGCGATCGTCTGATCGATCAAGGTGATGACGCCATCG CTGAAGTATTGAATCTGTGGCCCGATGCCGATCGTCAGCAGCTGCGTACTCTGATCCGTAACGCGAAGAAAGAGAAAGAA GGGAATAAGCCGCCGAAATCCGCACGCCAGATTTTCCAGTATCTGCGCGAACTGGCGGAGAATGAAGGGTAA
Upstream 100 bases:
>100_bases GTGCCATAATGTAGAGAGTTTCTCTGAAGTCTAACAGAGAACCGTTTTTCAGTGCGCATCTTAACTGGTAACATTAGCCT CTTTTTTTAAGGAGCCTGAG
Downstream 100 bases:
>100_bases TTTTCGTTGTTGATGTGAGTATGGTTTGCCGGATGCGGTGCACCTGTAGGCCGGATAAGACGCATCAAGCGTCGCATCAG GCACTATGCTCAAATGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MTKQPEDWLDDVPGDDIEDEDDEIIWVSKSEIKRDAEELKRLGAEIVDLGKNALDKIPLDADLRAAIELAQRIKMEGRRR QLQLIGKMLRQRDVEPIRQALDKLKNRHNQQVVLFHKLENLRDRLIDQGDDAIAEVLNLWPDADRQQLRTLIRNAKKEKE GNKPPKSARQIFQYLRELAENEG
Sequences:
>Translated_183_residues MTKQPEDWLDDVPGDDIEDEDDEIIWVSKSEIKRDAEELKRLGAEIVDLGKNALDKIPLDADLRAAIELAQRIKMEGRRR QLQLIGKMLRQRDVEPIRQALDKLKNRHNQQVVLFHKLENLRDRLIDQGDDAIAEVLNLWPDADRQQLRTLIRNAKKEKE GNKPPKSARQIFQYLRELAENEG >Mature_182_residues TKQPEDWLDDVPGDDIEDEDDEIIWVSKSEIKRDAEELKRLGAEIVDLGKNALDKIPLDADLRAAIELAQRIKMEGRRRQ LQLIGKMLRQRDVEPIRQALDKLKNRHNQQVVLFHKLENLRDRLIDQGDDAIAEVLNLWPDADRQQLRTLIRNAKKEKEG NKPPKSARQIFQYLRELAENEG
Specific function: Unknown
COG id: COG3028
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0307 family [H]
Homologues:
Organism=Escherichia coli, GI1790681, Length=183, Percent_Identity=100, Blast_Score=357, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023153 - InterPro: IPR006839 [H]
Pfam domain/function: PF04751 DUF615 [H]
EC number: NA
Molecular weight: Translated: 21360; Mature: 21228
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKQPEDWLDDVPGDDIEDEDDEIIWVSKSEIKRDAEELKRLGAEIVDLGKNALDKIPLD CCCCCCHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ADLRAAIELAQRIKMEGRRRQLQLIGKMLRQRDVEPIRQALDKLKNRHNQQVVLFHKLEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHH LRDRLIDQGDDAIAEVLNLWPDADRQQLRTLIRNAKKEKEGNKPPKSARQIFQYLRELAE HHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC NEG CCC >Mature Secondary Structure TKQPEDWLDDVPGDDIEDEDDEIIWVSKSEIKRDAEELKRLGAEIVDLGKNALDKIPLD CCCCCHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ADLRAAIELAQRIKMEGRRRQLQLIGKMLRQRDVEPIRQALDKLKNRHNQQVVLFHKLEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHH LRDRLIDQGDDAIAEVLNLWPDADRQQLRTLIRNAKKEKEGNKPPKSARQIFQYLRELAE HHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC NEG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA