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The map label for this gene is rsgA [H]

Identifier: 157163627

GI number: 157163627

Start: 4415198

End: 4416250

Strand: Reverse

Name: rsgA [H]

Synonym: EcHS_A4404

Alternate gene names: 157163627

Gene position: 4416250-4415198 (Counterclockwise)

Preceding gene: 157163629

Following gene: 157163626

Centisome position: 95.11

GC content: 53.94

Gene sequence:

>1053_bases
TTGAGTAAAAATAAACTCTCCAAAGGCCAGCAGCGCCGCGTGAACGCCAATCACCAGCGTCGTCTTAAAACGTCTAAGGA
GAAGCCCGACTACGACGACAATCTGTTTGGCGAGCCTGATGAAGGTATCGTCATCAGCCGCTTTGGTATGCACGCTGATG
TGGAATCCGCCGATGGCGACGTTCACCGCTGCAATATTCGCCGTACCATCCGTTCGCTGGTAACCGGCGACCGCGTAGTC
TGGCGTCCGGGTAAACCGGCGGCGGAAGGCGTAAATGTCAAAGGGATCGTGGAAGCGGTGCATGAGCGTACCTCGGTGTT
GACGCGTCCGGATTTCTACGACGGCGTAAAACCTATTGCCGCCAACATCGACCAGATTGTCATTGTCTCCGCCATTTTGC
CGGAGCTGTCGCTCAATATTATCGACCGTTACCTGGTGGCCTGCGAAACCTTGCAGATTGAGCCGATTATTGTGCTCAAC
AAGATAGACCTGCTGGACGACGAAGGCATGGCGTTCGTCAACGAGCAGATGGATATCTACCGCAATATCGGTTATCGCGT
ATTGATGGTTTCCAGCCATACTCAGGATGGGCTAAAACCGCTGGAAGAGGCGTTGACCGGGCGCATCAGCATTTTTGCCG
GGCAGTCTGGCGTCGGCAAATCCAGCCTGCTGAATGCGTTGCTGGGGCTGCAAAAAGAGATCCTGACCAACGATGTCTCT
GACAACTCGGGGCTCGGTCAGCACACCACGACCGCCGCTCGGCTGTATCACTTCCCGCACGGCGGTGATGTGATTGATTC
CCCTGGTGTGCGTGAGTTCGGCCTCTGGCACCTGGAGCCGGAACAAATCACTCAGGGCTTTGTCGAATTCCATGACTATT
TAGGTCTGTGTAAATATCGCGATTGCAAACACGATACCGATCCGGGCTGCGCTATCCGGGAAGCGGTTGAGGAAGGGAAA
ATCGCGGAAACCCGTTTCGAAAACTATCACCGTATTCTGGAAAGCATGGCGCAGGTAAAAACGCGTAAAAACTTTTCTGA
TACGGATGACTGA

Upstream 100 bases:

>100_bases
ACTCATGCTATTTTCCACCCATTCACAGGGACTATATTGATCCACAATTGCGTGTATCATAGATGTTTTGCCCATCAGGG
GCGACCAGGAGTCTGTACGA

Downstream 100 bases:

>100_bases
CAATTAAGCTAACCGTCGTTAGAATCGTCCCCTTTTTTTCAGGATCCGGCATGTTGGCCGGATCAGGAACGACAAAACAA
TGGCCTGGAGGCTACCTTGT

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVV
WRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLN
KIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDVS
DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGK
IAETRFENYHRILESMAQVKTRKNFSDTDD

Sequences:

>Translated_350_residues
MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVV
WRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLN
KIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDVS
DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGK
IAETRFENYHRILESMAQVKTRKNFSDTDD
>Mature_349_residues
SKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVW
RPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNK
IDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDVSD
NSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKI
AETRFENYHRILESMAQVKTRKNFSDTDD

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=350, Percent_Identity=99.7142857142857, Blast_Score=724, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 39180; Mature: 39049

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD
CCCCCCCCCHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA
EEEHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCHHHH
ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCCCCCHHHHHHHHHH
RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDVS
HCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR
CCCCCCCHHHHHHHEEECCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCC
DCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTDD
CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD
CCCCCCCCHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA
EEEHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCHHHH
ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCCCCCHHHHHHHHHH
RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDVS
HCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR
CCCCCCCHHHHHHHEEECCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCC
DCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTDD
CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA