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The map label for this gene is uspD [H]

Identifier: 157163397

GI number: 157163397

Start: 4141302

End: 4141730

Strand: Direct

Name: uspD [H]

Synonym: EcHS_A4154

Alternate gene names: 157163397

Gene position: 4141302-4141730 (Clockwise)

Preceding gene: 157163396

Following gene: 157163402

Centisome position: 89.18

GC content: 43.12

Gene sequence:

>429_bases
ATGGCTTATAAACACATTGGCGTGGCAATTTCCGGGAATGAAGAAGATGCCTTACTGGTGAATAAAGCCCTGGAGCTCGC
CAGACATAATGACGCTCACCTGACGTTAATTCATATTGATGATGGCTTAAGCGAGTTGTATCCGGGTATCTACTTCCCTG
CAACAGAAGATATTCTTCAATTGTTGAAGAATAAGTCGGATAACAAGCTGTATAAACTGACGAAAAATATTCAATGGCCG
AAGACAAAACTGCGTATTGAACGCGGAGAAATGCCGGAAACACTGCTGGAAATTATGCAAAAAGAGCAGTGCGACCTCCT
TGTCTGTGGTCATCATCACTCATTTATCAACCGTTTGATGCCGGCATATCGCGGGATGATCAATAAGATGAGTGCGGATT
TGCTCATCGTGCCGTTTATCGATAAGTAA

Upstream 100 bases:

>100_bases
TTGATGCGGCCTTCACTTTCTCATGCCAGGCCGAGATGATTATTTTTGAGTTATCACTGCGTTCGTTAGCTTGATGGAGT
TGCTTTAGAAGGAGTTAAAC

Downstream 100 bases:

>100_bases
CCGCTTACCAGTAATGCTCCGCTGTCATATGGCCCGGTCGGCGACGTAAATGTTTCGTCATCTGCCGGGTCTCTTTCAGC
AACTGTTGTGTATCGCGCAC

Product: universal stress protein UspD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MAYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLSELYPGIYFPATEDILQLLKNKSDNKLYKLTKNIQWP
KTKLRIERGEMPETLLEIMQKEQCDLLVCGHHHSFINRLMPAYRGMINKMSADLLIVPFIDK

Sequences:

>Translated_142_residues
MAYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLSELYPGIYFPATEDILQLLKNKSDNKLYKLTKNIQWP
KTKLRIERGEMPETLLEIMQKEQCDLLVCGHHHSFINRLMPAYRGMINKMSADLLIVPFIDK
>Mature_141_residues
AYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLSELYPGIYFPATEDILQLLKNKSDNKLYKLTKNIQWPK
TKLRIERGEMPETLLEIMQKEQCDLLVCGHHHSFINRLMPAYRGMINKMSADLLIVPFIDK

Specific function: Required for resistance to DNA-damaging agents [H]

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI1790358, Length=142, Percent_Identity=100, Blast_Score=293, Evalue=2e-81,
Organism=Escherichia coli, GI1789909, Length=142, Percent_Identity=35.9154929577465, Blast_Score=100, Evalue=3e-23,
Organism=Escherichia coli, GI1788205, Length=140, Percent_Identity=32.1428571428571, Blast_Score=78, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 16293; Mature: 16162

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLSELYPGIYFPATEDILQ
CCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHCCCEECCCHHHHHH
LLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLLEIMQKEQCDLLVCGHHHSFINRLM
HHHCCCCCHHHHHHCCCCCCHHHEEEECCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHH
PAYRGMINKMSADLLIVPFIDK
HHHHHHHHHCCCCEEEEEECCC
>Mature Secondary Structure 
AYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLSELYPGIYFPATEDILQ
CCEEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHCCCEECCCHHHHHH
LLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLLEIMQKEQCDLLVCGHHHSFINRLM
HHHCCCCCHHHHHHCCCCCCHHHEEEECCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHH
PAYRGMINKMSADLLIVPFIDK
HHHHHHHHHCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]