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The map label for this gene is yiiS

Identifier: 157163396

GI number: 157163396

Start: 4140976

End: 4141275

Strand: Direct

Name: yiiS

Synonym: EcHS_A4153

Alternate gene names: 157163396

Gene position: 4140976-4141275 (Clockwise)

Preceding gene: 157163395

Following gene: 157163397

Centisome position: 89.18

GC content: 46.33

Gene sequence:

>300_bases
ATGAAAGATGTCGTAGATAAATGCAGTACTAAAGGATGTGCGATTGATATCGGTACGGTGATTGATAACGACAACTGTAC
CAGTAAGTTTTCGCGCTTTTTTGCCACCCGCGAAGAAGCAGAGTCTTTTATGACCAAACTGAAAGAGCTTGCCGCCGCTA
CATCCTCTGCAGATGAAGGGGCCAGCGTGGCCTATAAGATTAAGGATCTGGAGGGGCAAGTTGAGCTTGATGCGGCCTTC
ACTTTCTCATGCCAGGCCGAGATGATTATTTTTGAGTTATCACTGCGTTCGTTAGCTTGA

Upstream 100 bases:

>100_bases
AAATGGTAATCCATAAGATCATTACTTGTTTGTTCTTCCCTTAACGGCGCATTATTCTTAAGTCGTAATCGACAGAGAGG
CGAATATACAGAGGTGCCCT

Downstream 100 bases:

>100_bases
TGGAGTTGCTTTAGAAGGAGTTAAACATGGCTTATAAACACATTGGCGTGGCAATTTCCGGGAATGAAGAAGATGCCTTA
CTGGTGAATAAAGCCCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDLEGQVELDAAF
TFSCQAEMIIFELSLRSLA

Sequences:

>Translated_99_residues
MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDLEGQVELDAAF
TFSCQAEMIIFELSLRSLA
>Mature_99_residues
MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDLEGQVELDAAF
TFSCQAEMIIFELSLRSLA

Specific function: Unknown

COG id: COG3691

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0381 family

Homologues:

Organism=Escherichia coli, GI1790357, Length=99, Percent_Identity=100, Blast_Score=197, Evalue=1e-52,
Organism=Escherichia coli, GI87082087, Length=84, Percent_Identity=42.8571428571429, Blast_Score=72, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YIIS_ECOLI (P32162)

Other databases:

- EMBL:   L19201
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   S40865
- RefSeq:   AP_003887.1
- RefSeq:   NP_418357.1
- PDB:   2K3I
- PDBsum:   2K3I
- ProteinModelPortal:   P32162
- SMR:   P32162
- STRING:   P32162
- EnsemblBacteria:   EBESCT00000003788
- EnsemblBacteria:   EBESCT00000014757
- GeneID:   948416
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW3893
- KEGG:   eco:b3922
- EchoBASE:   EB1822
- EcoGene:   EG11876
- eggNOG:   COG3691
- GeneTree:   EBGT00050000010248
- HOGENOM:   HBG298790
- OMA:   IDNEDCV
- ProtClustDB:   PRK09981
- BioCyc:   EcoCyc:EG11876-MONOMER
- Genevestigator:   P32162
- InterPro:   IPR005272
- TIGRFAMs:   TIGR00743

Pfam domain/function: PF04175 DUF406

EC number: NA

Molecular weight: Translated: 10776; Mature: 10776

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEG
CCCHHHHHCCCCCEEEECEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA
CEEEEEEECCCCEEEEEEEEEECCCCEEEEEEEEHHHCC
>Mature Secondary Structure
MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEG
CCCHHHHHCCCCCEEEECEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA
CEEEEEEECCCCEEEEEEEEEECCCCEEEEEEEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503