| Definition | Escherichia coli HS, complete genome. |
|---|---|
| Accession | NC_009800 |
| Length | 4,643,538 |
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The map label for this gene is yhjX
Identifier: 157163022
GI number: 157163022
Start: 3740102
End: 3741310
Strand: Reverse
Name: yhjX
Synonym: EcHS_A3748
Alternate gene names: 157163022
Gene position: 3741310-3740102 (Counterclockwise)
Preceding gene: 157163023
Following gene: 157163021
Centisome position: 80.57
GC content: 51.2
Gene sequence:
>1209_bases ATGACACCTTCAAATTATCAGCGTACCCGCTGGCTGACACTCATCGGTACTATCATTACCCAGTTTGCGCTGGGGTCGGT TTATACCTGGAGCCTGTTTAATGGCGCGCTTTCCGCCAAGCTGGATGCGCCGGTAAGCCAGGTCGCTTTCTCTTTCGGCT TGTTAAGTCTGGGGCTGGCAATTTCGTCTTCTGTTGCGGGCAAATTACAGGAACGTTTTGGCGTTAAACGCGTCACCATG GCTTCCGGCATTTTGCTGGGATTAGGCTTCTTCCTGACAGCGCATTCTGACAACCTGATGATGCTGTGGTTAAGCGCCGG TGTGCTGGTGGGACTGGCAGATGGCGCGGGTTATCTGCTGACGCTCTCTAACTGTGTGAAGTGGTTCCCGGAGCGTAAAG GTCTGATCTCCGCGTTCGCTATCGGTTCTTATGGTCTGGGTAGCCTGGGTTTCAAATTTATCGACACGCAGCTGCTGGAA ACGGTCGGTCTGGAAAAAACCTTTGTGATTTGGGGAGCGATTGCGCTGTTGATGATTGTTTTCGGCGCAACGTTAATGAA AGACGCACCAAAACAGGAAGTGAAAACCAGCAATGGTGTGGTGGAGAAAGATTACACGCTGGCAGAGTCGATGCGTAAAC CGCAGTACTGGATGTTAGCGGTAATGTTCCTGACCGCCTGCATGAGCGGCCTGTACGTGATTGGGGTAGCGAAAGATATC GCCCAAAGTCTGGCACACCTTGATGTGGTTTCCGCAGCCAATGCAGTCACTGTTATTTCCATCGCCAACCTTTCAGGTCG TCTGGTGCTGGGTATTCTGTCTGACAAAATCGCCCGTATCCGTGTTATTACCATTGGTCAGGTGATATCGCTGGTGGGTA TGGCGGCCCTGCTGTTTGCACCATTGAATGCAGTGACGTTCTTTGCAGCGATTGCCTGCGTGGCATTTAACTTTGGCGGC ACTATTACCGTCTTTCCGTCACTGGTCAGTGAGTTCTTTGGCCTCAATAACCTGGCGAAAAACTACGGTGTGATTTATCT CGGTTTCGGTATCGGTAGCATTTGTGGTTCGATTATCGCCTCACTGTTTGGCGGCTTCTATGTGACCTTCTACGTGATTT TCGCCCTGCTGATTCTGTCATTGGCGCTTTCTACGACGATTCGTCAGCCAGAGCAGAAAATGTTGCGTGAGGCGCATGGC TCCCTTTAA
Upstream 100 bases:
>100_bases TTCTGATGGCATTTCATGCCGTTTTTCCCCAGGCATAAAGTGCACTTCGTTATGGTTGTCGGCAGAGATTTTTCCTTTTT ATTACTGCAGGAATACTGCC
Downstream 100 bases:
>100_bases TGCTCAGCCGCGAGCTACTGGGCTTCAGCTTCCGTGTGCATCAAACGCATCAACGAAATGTATAAACAATGACTCGTAAA ATTTGGGCCAATTAACTGGC
Product: major facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MTPSNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAPVSQVAFSFGLLSLGLAISSSVAGKLQERFGVKRVTM ASGILLGLGFFLTAHSDNLMMLWLSAGVLVGLADGAGYLLTLSNCVKWFPERKGLISAFAIGSYGLGSLGFKFIDTQLLE TVGLEKTFVIWGAIALLMIVFGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWMLAVMFLTACMSGLYVIGVAKDI AQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDKIARIRVITIGQVISLVGMAALLFAPLNAVTFFAAIACVAFNFGG TITVFPSLVSEFFGLNNLAKNYGVIYLGFGIGSICGSIIASLFGGFYVTFYVIFALLILSLALSTTIRQPEQKMLREAHG SL
Sequences:
>Translated_402_residues MTPSNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAPVSQVAFSFGLLSLGLAISSSVAGKLQERFGVKRVTM ASGILLGLGFFLTAHSDNLMMLWLSAGVLVGLADGAGYLLTLSNCVKWFPERKGLISAFAIGSYGLGSLGFKFIDTQLLE TVGLEKTFVIWGAIALLMIVFGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWMLAVMFLTACMSGLYVIGVAKDI AQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDKIARIRVITIGQVISLVGMAALLFAPLNAVTFFAAIACVAFNFGG TITVFPSLVSEFFGLNNLAKNYGVIYLGFGIGSICGSIIASLFGGFYVTFYVIFALLILSLALSTTIRQPEQKMLREAHG SL >Mature_401_residues TPSNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAPVSQVAFSFGLLSLGLAISSSVAGKLQERFGVKRVTMA SGILLGLGFFLTAHSDNLMMLWLSAGVLVGLADGAGYLLTLSNCVKWFPERKGLISAFAIGSYGLGSLGFKFIDTQLLET VGLEKTFVIWGAIALLMIVFGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWMLAVMFLTACMSGLYVIGVAKDIA QSLAHLDVVSAANAVTVISIANLSGRLVLGILSDKIARIRVITIGQVISLVGMAALLFAPLNAVTFFAAIACVAFNFGGT ITVFPSLVSEFFGLNNLAKNYGVIYLGFGIGSICGSIIASLFGGFYVTFYVIFALLILSLALSTTIRQPEQKMLREAHGS L
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789969, Length=402, Percent_Identity=100, Blast_Score=799, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YHJX_ECOLI (P37662)
Other databases:
- EMBL: U00039 - EMBL: U00096 - EMBL: AP009048 - PIR: S47768 - RefSeq: AP_004247.1 - RefSeq: NP_418003.1 - ProteinModelPortal: P37662 - DIP: DIP-12395N - MINT: MINT-1232452 - STRING: P37662 - EnsemblBacteria: EBESCT00000002874 - EnsemblBacteria: EBESCT00000016948 - GeneID: 948066 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: ecj:JW3516 - KEGG: eco:b3547 - EchoBASE: EB2177 - EcoGene: EG12268 - eggNOG: COG0477 - GeneTree: EBGT00050000008815 - HOGENOM: HBG298895 - OMA: VPLNANL - ProtClustDB: CLSK880718 - BioCyc: EcoCyc:YHJX-MONOMER - Genevestigator: P37662 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004741 - TIGRFAMs: TIGR00890
Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter
EC number: NA
Molecular weight: Translated: 42951; Mature: 42820
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x17c568b4)-; HASH(0x184335c4)-; HASH(0x184d2f84)-; HASH(0x151c9c04)-; HASH(0x182c3504)-; HASH(0x1859a764)-; HASH(0x182cf6a0)-; HASH(0x185fec8c)-; HASH(0x17fbfb48)-; HASH(0x180c01b8)-; HASH(0x1831f9e8)-; HASH(0x188292d8)-;
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAPVSQVAFSFGLLSLGLA CCCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHCHHHCCCCCCHHHHHHHHHHHHHHHH ISSSVAGKLQERFGVKRVTMASGILLGLGFFLTAHSDNLMMLWLSAGVLVGLADGAGYLL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEHEEHHCHHEEECCCCCHHH TLSNCVKWFPERKGLISAFAIGSYGLGSLGFKFIDTQLLETVGLEKTFVIWGAIALLMIV HHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWMLAVMFLTACMSGLYVIGVAKDI HHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEHHHHHH AQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDKIARIRVITIGQVISLVGMAALLFA HHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEHHCCHHHEEEEHHHHHHHHHHHHHHHHH PLNAVTFFAAIACVAFNFGGTITVFPSLVSEFFGLNNLAKNYGVIYLGFGIGSICGSIIA HHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHH SLFGGFYVTFYVIFALLILSLALSTTIRQPEQKMLREAHGSL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCH >Mature Secondary Structure TPSNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAPVSQVAFSFGLLSLGLA CCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHCHHHCCCCCCHHHHHHHHHHHHHHHH ISSSVAGKLQERFGVKRVTMASGILLGLGFFLTAHSDNLMMLWLSAGVLVGLADGAGYLL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEHEEHHCHHEEECCCCCHHH TLSNCVKWFPERKGLISAFAIGSYGLGSLGFKFIDTQLLETVGLEKTFVIWGAIALLMIV HHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWMLAVMFLTACMSGLYVIGVAKDI HHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEHHHHHH AQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDKIARIRVITIGQVISLVGMAALLFA HHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEHHCCHHHEEEEHHHHHHHHHHHHHHHHH PLNAVTFFAAIACVAFNFGGTITVFPSLVSEFFGLNNLAKNYGVIYLGFGIGSICGSIIA HHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHH SLFGGFYVTFYVIFALLILSLALSTTIRQPEQKMLREAHGSL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503