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The map label for this gene is cse4 [H]

Identifier: 157162207

GI number: 157162207

Start: 2898284

End: 2899375

Strand: Reverse

Name: cse4 [H]

Synonym: EcHS_A2897

Alternate gene names: 157162207

Gene position: 2899375-2898284 (Counterclockwise)

Preceding gene: 157162208

Following gene: 157162206

Centisome position: 62.44

GC content: 43.96

Gene sequence:

>1092_bases
ATGTCTAACTTTATCAATATTCATGTTCTGATCTCTCACAGCCCTTCATGTCTGAACCGCGACGATATGAACATGCAGAA
AGACGCTATTTTCGGCGGGAAAAGACGAGTAAGAATTTCAAGTCAAAGCCTTAAACGTGCGATGCGTAAAAGTGATTATT
ATGCACAAAATATTGGTGAATCCAGTCTCAGAACAATTCATCTTGCACAATTACGTGATGTTCTTCGGCAAAAACTTGGT
GAACGTTTTGAGCAAAAAATCATCGATAAGACATTAGCTCTGCTCTCCGGTAAATCAGTTGATGAAGCCGAAAAGATTTC
TGCCGATGCGGTTACTCCCTGGGTTGTGGGAGAAATAGCCTGGTTCTGTGAGCAGGTTGCAAAAGCAGAGGCTGATAATC
TGGATGATAAAAAGCTGCTCAAAGTTCTTAAGGAAGATATTGCCGCCATACGTGTGAATTTACAGCAGGGTGTTGATATT
GCGCTTAGTGGAAGAATGGCAACCAGCGGCATGATGAGTGAGTTGGGAAAAGTTGATGGTGCAATGTCCATTGCGCATGC
GATCACTACCCATCAGGTTGATTCTGATATTGACTGGTTCACCGCCGTAGATGATTTACAGGAACAAGGTTCTGCACATC
TGGGAACACAGGAATTTTCATCGGGTGTTTTTTATCGTTATGCCAATATTAACCTCGCTCAACTTCAGGAAAATTTAGGC
GGTGCCTCCAGGGAGCAGGCTCTGGAAATTGCAACCCATGTTGTTCATATGCTGGCAACAGAGGTCCCTGGAGCAAAACA
GCGTACTTATGCCGCTTTTAACCCTGCGGATATGGTAATGGTTAATTTCTCCGATATGCCACTTTCTATGGCAAATGCTT
TTGAAAAAGCGGTGAAAGCGAAAGATGGCTTTTTGCAACCGTCTTTACAGGCGTTTAATCAATATTGGGATCGCGTTGCC
AATGGATATGGTCTGAACGGAGCCGCTGCGCAATTCAGCTTGTCTGATGTAGACCCTATTACTGGTCAGGTACAGCAAAT
GCCTACTTTAGAACAGTTAAAGTCCTGGGTTCGTAATAATGGCGAGGCGTGA

Upstream 100 bases:

>100_bases
AATGGCCAGGATGTTGACCTGGTGGGGAAAGCGCGAACGCCAGCAACTTCTGGAAGATTTTGTATTGACCACAAACAAAA
ATGCGTAAGGAAACCTTTCT

Downstream 100 bases:

>100_bases
ACATGAAATCTTATTTGATCTTGCGACTTGCTGGGCCAATGCAAGCTTGGGGACAGCCGACCTTTGAAGGAACGCGACCT
ACCGGAAGATTTCCGACCCG

Product: CRISPR-associated Cse4 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MSNFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSDYYAQNIGESSLRTIHLAQLRDVLRQKLG
ERFEQKIIDKTLALLSGKSVDEAEKISADAVTPWVVGEIAWFCEQVAKAEADNLDDKKLLKVLKEDIAAIRVNLQQGVDI
ALSGRMATSGMMSELGKVDGAMSIAHAITTHQVDSDIDWFTAVDDLQEQGSAHLGTQEFSSGVFYRYANINLAQLQENLG
GASREQALEIATHVVHMLATEVPGAKQRTYAAFNPADMVMVNFSDMPLSMANAFEKAVKAKDGFLQPSLQAFNQYWDRVA
NGYGLNGAAAQFSLSDVDPITGQVQQMPTLEQLKSWVRNNGEA

Sequences:

>Translated_363_residues
MSNFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSDYYAQNIGESSLRTIHLAQLRDVLRQKLG
ERFEQKIIDKTLALLSGKSVDEAEKISADAVTPWVVGEIAWFCEQVAKAEADNLDDKKLLKVLKEDIAAIRVNLQQGVDI
ALSGRMATSGMMSELGKVDGAMSIAHAITTHQVDSDIDWFTAVDDLQEQGSAHLGTQEFSSGVFYRYANINLAQLQENLG
GASREQALEIATHVVHMLATEVPGAKQRTYAAFNPADMVMVNFSDMPLSMANAFEKAVKAKDGFLQPSLQAFNQYWDRVA
NGYGLNGAAAQFSLSDVDPITGQVQQMPTLEQLKSWVRNNGEA
>Mature_362_residues
SNFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSDYYAQNIGESSLRTIHLAQLRDVLRQKLGE
RFEQKIIDKTLALLSGKSVDEAEKISADAVTPWVVGEIAWFCEQVAKAEADNLDDKKLLKVLKEDIAAIRVNLQQGVDIA
LSGRMATSGMMSELGKVDGAMSIAHAITTHQVDSDIDWFTAVDDLQEQGSAHLGTQEFSSGVFYRYANINLAQLQENLGG
ASREQALEIATHVVHMLATEVPGAKQRTYAAFNPADMVMVNFSDMPLSMANAFEKAVKAKDGFLQPSLQAFNQYWDRVAN
GYGLNGAAAQFSLSDVDPITGQVQQMPTLEQLKSWVRNNGEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789116, Length=363, Percent_Identity=98.3471074380165, Blast_Score=742, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010148 [H]

Pfam domain/function: PF09344 Cas_CT1975 [H]

EC number: NA

Molecular weight: Translated: 40070; Mature: 39939

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSDYYAQNIGE
CCCEEEEEEEEECCCCCCCCCCCCCHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCH
SSLRTIHLAQLRDVLRQKLGERFEQKIIDKTLALLSGKSVDEAEKISADAVTPWVVGEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHH
WFCEQVAKAEADNLDDKKLLKVLKEDIAAIRVNLQQGVDIALSGRMATSGMMSELGKVDG
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHH
AMSIAHAITTHQVDSDIDWFTAVDDLQEQGSAHLGTQEFSSGVFYRYANINLAQLQENLG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEECCHHHHHHHHHC
GASREQALEIATHVVHMLATEVPGAKQRTYAAFNPADMVMVNFSDMPLSMANAFEKAVKA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
KDGFLQPSLQAFNQYWDRVANGYGLNGAAAQFSLSDVDPITGQVQQMPTLEQLKSWVRNN
HCCCCCHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCCCCHHHHHCCCHHHHHHHHHCC
GEA
CCC
>Mature Secondary Structure 
SNFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSDYYAQNIGE
CCEEEEEEEEECCCCCCCCCCCCCHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCH
SSLRTIHLAQLRDVLRQKLGERFEQKIIDKTLALLSGKSVDEAEKISADAVTPWVVGEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHH
WFCEQVAKAEADNLDDKKLLKVLKEDIAAIRVNLQQGVDIALSGRMATSGMMSELGKVDG
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHH
AMSIAHAITTHQVDSDIDWFTAVDDLQEQGSAHLGTQEFSSGVFYRYANINLAQLQENLG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEECCHHHHHHHHHC
GASREQALEIATHVVHMLATEVPGAKQRTYAAFNPADMVMVNFSDMPLSMANAFEKAVKA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
KDGFLQPSLQAFNQYWDRVANGYGLNGAAAQFSLSDVDPITGQVQQMPTLEQLKSWVRNN
HCCCCCHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCCCCHHHHHCCCHHHHHHHHHCC
GEA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]