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The map label for this gene is yehB [H]

Identifier: 157161593

GI number: 157161593

Start: 2230779

End: 2233259

Strand: Reverse

Name: yehB [H]

Synonym: EcHS_A2245

Alternate gene names: 157161593

Gene position: 2233259-2230779 (Counterclockwise)

Preceding gene: 157161594

Following gene: 157161592

Centisome position: 48.09

GC content: 45.47

Gene sequence:

>2481_bases
ATGTTGAGAATGACCCCACTTGCATCAGTAATCGTAGCGTTATTGCTCGGCATTGAAGCTTATGCAGCTGAAGAAACCTT
TGATACCCATTTTATGATAGGTGGAATGAAAGACCAGCAGGTTGCAAATATTCGTCTTGATGATAATCAACCCTTACCGG
GGCAGTATGACATCGATATTTATGTCAATAAGCAATGGCGCGGGAAATATGAGATTATTGTTAAAGACAACCCGCAAGAA
ACATGTTTATCAAGAGAAGTTATCAAGCGGTTAGGCATTAATAGCGATAACTTCGCCAGCGGTAAGCAATGTTTAACATT
TGAGCAACTTGTTCAGGGTGGGAGCTATACCTGGGATATCGGGGTTTTTCGTCTCGATTTCAGTGTCCCGCAGGCCTGGG
TGGAAGAACTGGAAAGTGGCTATGTTCCACCGGAAAACTGGGAGCGGGGTATTAATGCGTTTTATACCTCTTATTATCTG
AGTCAGTATTACAGCGACTATAAAGCGTCGGGTAATAACAAGAGTACATATGTACGTTTTAACAGCGGGTTAAATTTACT
GGGGTGGCAACTGCATTCTGATGCCAGTTTCAGTAAAACAAATAACAATCCAGGGGTGTGGAAAAGCAATACCCTGTATC
TGGAACGTGGATTTGCCCAACTTCTCGGCACGCTTCGCGTGGGTGATATGTACACATCAAGCGATATTTTTGATTCTGTT
CGCTTCAGAGGTGTGCGGTTGTTTCGTGATATGCAGATGTTGCCTAACTCGAAACAAAATTTTACGCCACGGGTGCAGGG
GATTGCTCAGAGTAACGCGCTGGTAACTATTGAACAGAATGGTTTTGTGGTTTATCAGAAAGAGGTTCCTCCTGGCCCGT
TCGCGATTACAGATTTGCAGTTGGCCGGTGGTGGAGCAGATCTTGATGTCAGCGTGAAAGAGGCGGACGGCTCGGTAACC
ACCTATCTGGTGCCTTATGCAGCGGTGCCAAATATGCTGCAACCCGGCGTGTCGAAATATGATTTAGCGGCGGGTCGTAG
CCATATTGAAGGGGCGAGCAAACAAAGTGATTTTGTCCAGGCGGGTTATCAGTATGGTTTTAATAATTTATTGACGCTGT
ATGGTGGCTCGATGGTCGCGAATAATTATTACGCGTTTACTTTGGGGGCTGGCTGGAATACACGCATTGGTGCCATTTCC
GTCGATGCCACTAAGTCGCATAGTAAACAAGACAACGGCGATGTGTTTGACGGGCAAAGTTATCAAATTGCCTACAACAA
ATTTGTGAGCCAAACGTCGACGCGTTTTGGTCTGGCGGCCTGGCGTTATTCGTCGCGTGATTACCGGACATTTAACGATC
ACGTTTGGGCAAACAATAAAGATAATTATCGCCGTGATGAAAACGATGTCTATGACATTGCCGATTATTACCAGAACGAT
TTTGGCCGCAAAAATAGCTTTTCCGCCAATATGAGCCAGTCATTGCCAGAAGGTTGGGGGTCTGTGTCATTAAGTACGTT
ATGGCGAGATTACTGGGGGCGTAGCGGCAGTAGTAAGGATTATCAGTTGAGTTATTCCAACAACCTGCGACGGATAAGCT
ATACCCTCGCGGCAAGCCAGGCTTATGACGAGAATCATCATGAAGAGAAACGTTTTAATATTTTTATATCGATTCCCTTT
GATTGGGGTGATGACGTTTCGACGCCTCGTCGGCAAAAATATATGTCTAACTCAACGACGTTTGATGATCAGGGGTTTGC
CTCAAATAATACGGGATTATCAGGAACAGTAGGGAGTCGGGATCAGTTCAATTATGGTGTCAACCTGAGTCATCAACATC
AGGGAAATGAAACGACAGCTGGGGCGAATTTGACCTGGAACGCGCCGGTTGCGACAGTGAATGGCAGTTATAGTCAGTCG
AGTACTTATCGACAGGCTGGAGCCAGTGTTTCAGGGGGCATTGTCGCCTGGTCGGGTGGCGTTAATCTGGCGAACCGTCT
TTCCGAAACGTTTGCTGTGATGAATGCGCCAGGAATTAAAGATGCTTATGTCAATGGGCAAAAATATCGCACAACAAACC
GTAATGGAGTGGTGATATACGACGGAATGACACCTTATCGGGAAAATCACCTGATGCTGGATGTGTCGCAAAGCGATAGC
GAAGCAGAATTACGTGGCAACCGGAAAATTGCCGCCCCTTATCGCGGCGCGGTTGTACTGGTTAATTTTGATACCGATCA
GCGCAAGCCATGGTTTATAAAAGCGTTAAGAGCAGATGGGCAATCATTAACGTTTGGTTATGAAGTCAATGATATCCATG
GTCATAATATTGGCGTTGTCGGCCAGGGAAGTCAGTTATTTATTCGCACCAATGAAGTACCGCCATCGGTTAATGTGGCA
ATTGATAAGCAACAAGGACTTTCATGCACAATCACCTTCGGTAAAGAGATTGATGAAAGTAGAAATTATATTTGCCAGTA
A

Upstream 100 bases:

>100_bases
TGTTAATGTCAAAAGTAATAATGCAAATAACTGGCATCTGACCATTATCGATGACCATGGCAACTATATTAGTGACAAAA
TTTAATTGCAGGAGCTGCCT

Downstream 100 bases:

>100_bases
TAGTCAGGTGGTTCTATGGAAATTCGCATAATGCTATTTATATTAATGATGATGGTTATGCCTGTGAGCTATGCGGCATG
TTATAGTGAGTTATCTGTTC

Product: fimbrial usher protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 826; Mature: 826

Protein sequence:

>826_residues
MLRMTPLASVIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANIRLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQE
TCLSREVIKRLGINSDNFASGKQCLTFEQLVQGGSYTWDIGVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYL
SQYYSDYKASGNNKSTYVRFNSGLNLLGWQLHSDASFSKTNNNPGVWKSNTLYLERGFAQLLGTLRVGDMYTSSDIFDSV
RFRGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQLAGGGADLDVSVKEADGSVT
TYLVPYAAVPNMLQPGVSKYDLAAGRSHIEGASKQSDFVQAGYQYGFNNLLTLYGGSMVANNYYAFTLGAGWNTRIGAIS
VDATKSHSKQDNGDVFDGQSYQIAYNKFVSQTSTRFGLAAWRYSSRDYRTFNDHVWANNKDNYRRDENDVYDIADYYQND
FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNLRRISYTLAASQAYDENHHEEKRFNIFISIPF
DWGDDVSTPRRQKYMSNSTTFDDQGFASNNTGLSGTVGSRDQFNYGVNLSHQHQGNETTAGANLTWNAPVATVNGSYSQS
STYRQAGASVSGGIVAWSGGVNLANRLSETFAVMNAPGIKDAYVNGQKYRTTNRNGVVIYDGMTPYRENHLMLDVSQSDS
EAELRGNRKIAAPYRGAVVLVNFDTDQRKPWFIKALRADGQSLTFGYEVNDIHGHNIGVVGQGSQLFIRTNEVPPSVNVA
IDKQQGLSCTITFGKEIDESRNYICQ

Sequences:

>Translated_826_residues
MLRMTPLASVIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANIRLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQE
TCLSREVIKRLGINSDNFASGKQCLTFEQLVQGGSYTWDIGVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYL
SQYYSDYKASGNNKSTYVRFNSGLNLLGWQLHSDASFSKTNNNPGVWKSNTLYLERGFAQLLGTLRVGDMYTSSDIFDSV
RFRGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQLAGGGADLDVSVKEADGSVT
TYLVPYAAVPNMLQPGVSKYDLAAGRSHIEGASKQSDFVQAGYQYGFNNLLTLYGGSMVANNYYAFTLGAGWNTRIGAIS
VDATKSHSKQDNGDVFDGQSYQIAYNKFVSQTSTRFGLAAWRYSSRDYRTFNDHVWANNKDNYRRDENDVYDIADYYQND
FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNLRRISYTLAASQAYDENHHEEKRFNIFISIPF
DWGDDVSTPRRQKYMSNSTTFDDQGFASNNTGLSGTVGSRDQFNYGVNLSHQHQGNETTAGANLTWNAPVATVNGSYSQS
STYRQAGASVSGGIVAWSGGVNLANRLSETFAVMNAPGIKDAYVNGQKYRTTNRNGVVIYDGMTPYRENHLMLDVSQSDS
EAELRGNRKIAAPYRGAVVLVNFDTDQRKPWFIKALRADGQSLTFGYEVNDIHGHNIGVVGQGSQLFIRTNEVPPSVNVA
IDKQQGLSCTITFGKEIDESRNYICQ
>Mature_826_residues
MLRMTPLASVIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANIRLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQE
TCLSREVIKRLGINSDNFASGKQCLTFEQLVQGGSYTWDIGVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYL
SQYYSDYKASGNNKSTYVRFNSGLNLLGWQLHSDASFSKTNNNPGVWKSNTLYLERGFAQLLGTLRVGDMYTSSDIFDSV
RFRGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQLAGGGADLDVSVKEADGSVT
TYLVPYAAVPNMLQPGVSKYDLAAGRSHIEGASKQSDFVQAGYQYGFNNLLTLYGGSMVANNYYAFTLGAGWNTRIGAIS
VDATKSHSKQDNGDVFDGQSYQIAYNKFVSQTSTRFGLAAWRYSSRDYRTFNDHVWANNKDNYRRDENDVYDIADYYQND
FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNLRRISYTLAASQAYDENHHEEKRFNIFISIPF
DWGDDVSTPRRQKYMSNSTTFDDQGFASNNTGLSGTVGSRDQFNYGVNLSHQHQGNETTAGANLTWNAPVATVNGSYSQS
STYRQAGASVSGGIVAWSGGVNLANRLSETFAVMNAPGIKDAYVNGQKYRTTNRNGVVIYDGMTPYRENHLMLDVSQSDS
EAELRGNRKIAAPYRGAVVLVNFDTDQRKPWFIKALRADGQSLTFGYEVNDIHGHNIGVVGQGSQLFIRTNEVPPSVNVA
IDKQQGLSCTITFGKEIDESRNYICQ

Specific function: Involved in the export and assembly of a fimbrial subunit across the outer membrane [H]

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI1788427, Length=826, Percent_Identity=99.7578692493947, Blast_Score=1705, Evalue=0.0,
Organism=Escherichia coli, GI1786332, Length=842, Percent_Identity=32.3040380047506, Blast_Score=408, Evalue=1e-115,
Organism=Escherichia coli, GI1790772, Length=858, Percent_Identity=29.3706293706294, Blast_Score=359, Evalue=1e-100,
Organism=Escherichia coli, GI1787172, Length=823, Percent_Identity=30.7411907654921, Blast_Score=349, Evalue=4e-97,
Organism=Escherichia coli, GI1786744, Length=829, Percent_Identity=30.0361881785283, Blast_Score=319, Evalue=6e-88,
Organism=Escherichia coli, GI1789533, Length=790, Percent_Identity=27.3417721518987, Blast_Score=288, Evalue=1e-78,
Organism=Escherichia coli, GI87081778, Length=487, Percent_Identity=29.1581108829569, Blast_Score=196, Evalue=4e-51,
Organism=Escherichia coli, GI1789610, Length=835, Percent_Identity=23.9520958083832, Blast_Score=126, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 92326; Mature: 92326

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRMTPLASVIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANIRLDDNQPLPGQYDIDI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCEEEEEE
YVNKQWRGKYEIIVKDNPQETCLSREVIKRLGINSDNFASGKQCLTFEQLVQGGSYTWDI
EECCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHCCCCEEEEE
GVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYLSQYYSDYKASGNNKSTYVRF
EEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
NSGLNLLGWQLHSDASFSKTNNNPGVWKSNTLYLERGFAQLLGTLRVGDMYTSSDIFDSV
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHEECCEECCHHHHHHH
RFRGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQ
HHHHHHHHHHHHHCCCCCCCCCCHHHEEECCCEEEEEECCCEEEEECCCCCCCEEEEEEE
LAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGVSKYDLAAGRSHIEGASKQSDFVQ
EECCCCCEEEEEEECCCCEEEEEEEHHHCCHHHCCCCCHHHHHCCCHHHCCCCCHHHHHH
AGYQYGFNNLLTLYGGSMVANNYYAFTLGAGWNTRIGAISVDATKSHSKQDNGDVFDGQS
HHHHHCCCCEEEEECCEEEECCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEECCCC
YQIAYNKFVSQTSTRFGLAAWRYSSRDYRTFNDHVWANNKDNYRRDENDVYDIADYYQND
EEEHHHHHHHHCCCHHEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHH
FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNLRRISYTLAASQ
CCCCCCCCCCHHHHCCCCCCCEEHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEEHHH
AYDENHHEEKRFNIFISIPFDWGDDVSTPRRQKYMSNSTTFDDQGFASNNTGLSGTVGSR
HHCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
DQFNYGVNLSHQHQGNETTAGANLTWNAPVATVNGSYSQSSTYRQAGASVSGGIVAWSGG
CCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCHHHHCCCCCCCCEEEEECC
VNLANRLSETFAVMNAPGIKDAYVNGQKYRTTNRNGVVIYDGMTPYRENHLMLDVSQSDS
CHHHHHHHHHHHHHCCCCCCHHEECCCEEEECCCCCEEEECCCCCCCCCEEEEEECCCCC
EAELRGNRKIAAPYRGAVVLVNFDTDQRKPWFIKALRADGQSLTFGYEVNDIHGHNIGVV
CHHHCCCCEEECCCCCEEEEEECCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCEEEEE
GQGSQLFIRTNEVPPSVNVAIDKQQGLSCTITFGKEIDESRNYICQ
ECCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MLRMTPLASVIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANIRLDDNQPLPGQYDIDI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCEEEEEE
YVNKQWRGKYEIIVKDNPQETCLSREVIKRLGINSDNFASGKQCLTFEQLVQGGSYTWDI
EECCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHCCCCEEEEE
GVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYLSQYYSDYKASGNNKSTYVRF
EEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
NSGLNLLGWQLHSDASFSKTNNNPGVWKSNTLYLERGFAQLLGTLRVGDMYTSSDIFDSV
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHEECCEECCHHHHHHH
RFRGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQ
HHHHHHHHHHHHHCCCCCCCCCCHHHEEECCCEEEEEECCCEEEEECCCCCCCEEEEEEE
LAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGVSKYDLAAGRSHIEGASKQSDFVQ
EECCCCCEEEEEEECCCCEEEEEEEHHHCCHHHCCCCCHHHHHCCCHHHCCCCCHHHHHH
AGYQYGFNNLLTLYGGSMVANNYYAFTLGAGWNTRIGAISVDATKSHSKQDNGDVFDGQS
HHHHHCCCCEEEEECCEEEECCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEECCCC
YQIAYNKFVSQTSTRFGLAAWRYSSRDYRTFNDHVWANNKDNYRRDENDVYDIADYYQND
EEEHHHHHHHHCCCHHEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHH
FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNLRRISYTLAASQ
CCCCCCCCCCHHHHCCCCCCCEEHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEEHHH
AYDENHHEEKRFNIFISIPFDWGDDVSTPRRQKYMSNSTTFDDQGFASNNTGLSGTVGSR
HHCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
DQFNYGVNLSHQHQGNETTAGANLTWNAPVATVNGSYSQSSTYRQAGASVSGGIVAWSGG
CCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCHHHHCCCCCCCCEEEEECC
VNLANRLSETFAVMNAPGIKDAYVNGQKYRTTNRNGVVIYDGMTPYRENHLMLDVSQSDS
CHHHHHHHHHHHHHCCCCCCHHEECCCEEEECCCCCEEEECCCCCCCCCEEEEEECCCCC
EAELRGNRKIAAPYRGAVVLVNFDTDQRKPWFIKALRADGQSLTFGYEVNDIHGHNIGVV
CHHHCCCCEEECCCCCEEEEEECCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCEEEEE
GQGSQLFIRTNEVPPSVNVAIDKQQGLSCTITFGKEIDESRNYICQ
ECCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097040 [H]