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The map label for this gene is yccZ [C]

Identifier: 157161547

GI number: 157161547

Start: 2175221

End: 2176357

Strand: Reverse

Name: yccZ [C]

Synonym: EcHS_A2193

Alternate gene names: 157161547

Gene position: 2176357-2175221 (Counterclockwise)

Preceding gene: 157161548

Following gene: 157161546

Centisome position: 46.87

GC content: 44.15

Gene sequence:

>1137_bases
ATGAAGAAAAAAATTGTTAGATTTTCGGCATTAGCGTTGGCAATTGGGTTTTTATCGGGTTGTACCATTATCCCTGGTCA
GGGATTAAACAGTCTGCGGAAAAACGTGGTTGAGCTACCGGACAGTGACTACGATCTGGATAAACTGGTTAATGTGTACC
CTATGACTCCTGGGCTTATCGATCAACTTCGTCCAGAGACCGTTCTGGCGAGACCTAACCCACAATTAGATAATTTGCTC
CGAAGCTATGAATATCGCATTGGTGTGGGCGATGTATTGATGGTTACGGTATGGGATCACCCGGAACTGACAACGCCAGC
AGGTCAGTACCGTAGCGCCAGCGACACTGGTAACTGGGTTAACTCTGACGGTACCATTTTCTATCCATATATTGGTAAGG
TGCAGGTGGCGGGCAAAACGCTTAGCCAGGTACGCCAGGATATAGCCAACCGATTGGCCACTTATATTGAAAGCCCACAG
GTTGATGTTAGCGTTGCTGCGTTTCGTTCTCAAAAGGTTTACGTGACAGGCGAAGTGACAAAATCAGGCCAGCAACCTAT
TACCAATATTCCTTTAACGGTTATGGATGCAATAAATGCCGCTGGTGGGCTGGCACCAGACGCAGATTGGCGTAATGTTG
TGCTGACTCATAATGGTAAAGATACAAAAGTATCACTTTATGCATTAATGCAAAAAGGGGATTTAACACAAAATCATATG
TTATATCCTGGAGATATTCTCTTTGTACCAAGGAATGACGATCTTAAAGTGTTTGTCATGGGAGAGGTTGGCAAGCAGAG
CACATTGAAGATGGATCGTAGTGGAATGACATTAGCAGAGGCAATCGGGAATGCGGAAGGCATGTCTCAAGCGTACAGTG
ATGCCACGGGAGTCTTCGTTATTCGCCAACTGAAAGGTGATAAACAAGGTAAAATTGCTAATATCTATCAGTTGAACGCG
CAAGATGCCTCCGCGATGGTTCTTGGTACAGAATTTGAATTACAACCTTATGATATCGTCTATGTCACATCGGCTCCATT
AGTACGTTGGAATCGTGTAATTTCCCAACTTGTACCTACCATTACTGGAGTACATGATATGACAGAAACTGTAAGATATA
TTAGGACCTGGCCATAA

Upstream 100 bases:

>100_bases
ACGCGGTTAGCTTTTATCTCTCCACAAGCCGGCAGGGAAGCAACGGCTATGACAGCTCTTCAGGAATTGGCAAATTTTGA
TTTACTAATGATGTGACATT

Downstream 100 bases:

>100_bases
AATGTTTGAATCAATTTTAGTTATTTGTACGGGCAATATTTGTCGTTCTCCAATAGGAGAACGGCTTTTACGAAAATTGC
TTCCCTCAAAGGTGATTAAT

Product: polysaccharide biosynthesis/export protein

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MKKKIVRFSALALAIGFLSGCTIIPGQGLNSLRKNVVELPDSDYDLDKLVNVYPMTPGLIDQLRPETVLARPNPQLDNLL
RSYEYRIGVGDVLMVTVWDHPELTTPAGQYRSASDTGNWVNSDGTIFYPYIGKVQVAGKTLSQVRQDIANRLATYIESPQ
VDVSVAAFRSQKVYVTGEVTKSGQQPITNIPLTVMDAINAAGGLAPDADWRNVVLTHNGKDTKVSLYALMQKGDLTQNHM
LYPGDILFVPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEAIGNAEGMSQAYSDATGVFVIRQLKGDKQGKIANIYQLNA
QDASAMVLGTEFELQPYDIVYVTSAPLVRWNRVISQLVPTITGVHDMTETVRYIRTWP

Sequences:

>Translated_378_residues
MKKKIVRFSALALAIGFLSGCTIIPGQGLNSLRKNVVELPDSDYDLDKLVNVYPMTPGLIDQLRPETVLARPNPQLDNLL
RSYEYRIGVGDVLMVTVWDHPELTTPAGQYRSASDTGNWVNSDGTIFYPYIGKVQVAGKTLSQVRQDIANRLATYIESPQ
VDVSVAAFRSQKVYVTGEVTKSGQQPITNIPLTVMDAINAAGGLAPDADWRNVVLTHNGKDTKVSLYALMQKGDLTQNHM
LYPGDILFVPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEAIGNAEGMSQAYSDATGVFVIRQLKGDKQGKIANIYQLNA
QDASAMVLGTEFELQPYDIVYVTSAPLVRWNRVISQLVPTITGVHDMTETVRYIRTWP
>Mature_378_residues
MKKKIVRFSALALAIGFLSGCTIIPGQGLNSLRKNVVELPDSDYDLDKLVNVYPMTPGLIDQLRPETVLARPNPQLDNLL
RSYEYRIGVGDVLMVTVWDHPELTTPAGQYRSASDTGNWVNSDGTIFYPYIGKVQVAGKTLSQVRQDIANRLATYIESPQ
VDVSVAAFRSQKVYVTGEVTKSGQQPITNIPLTVMDAINAAGGLAPDADWRNVVLTHNGKDTKVSLYALMQKGDLTQNHM
LYPGDILFVPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEAIGNAEGMSQAYSDATGVFVIRQLKGDKQGKIANIYQLNA
QDASAMVLGTEFELQPYDIVYVTSAPLVRWNRVISQLVPTITGVHDMTETVRYIRTWP

Specific function: May be involved in polysaccharide transport [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=378, Percent_Identity=75.3968253968254, Blast_Score=615, Evalue=1e-177,
Organism=Escherichia coli, GI1788376, Length=379, Percent_Identity=65.1715039577836, Blast_Score=533, Evalue=1e-153,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 41660; Mature: 41660

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKIVRFSALALAIGFLSGCTIIPGQGLNSLRKNVVELPDSDYDLDKLVNVYPMTPGLI
CCCHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCCHHHHHEEECCCCHHH
DQLRPETVLARPNPQLDNLLRSYEYRIGVGDVLMVTVWDHPELTTPAGQYRSASDTGNWV
HHCCCCEEEECCCCHHHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEE
NSDGTIFYPYIGKVQVAGKTLSQVRQDIANRLATYIESPQVDVSVAAFRSQKVYVTGEVT
CCCCCEEEEECCEEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEEC
KSGQQPITNIPLTVMDAINAAGGLAPDADWRNVVLTHNGKDTKVSLYALMQKGDLTQNHM
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCE
LYPGDILFVPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEAIGNAEGMSQAYSDATGVFV
ECCCCEEEEECCCCEEEEEEECCCCCCCEEECCCCCHHHHHHCCHHHHHHHHCCCCCEEE
IRQLKGDKQGKIANIYQLNAQDASAMVLGTEFELQPYDIVYVTSAPLVRWNRVISQLVPT
EEECCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHH
ITGVHDMTETVRYIRTWP
HHCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKKIVRFSALALAIGFLSGCTIIPGQGLNSLRKNVVELPDSDYDLDKLVNVYPMTPGLI
CCCHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCCHHHHHEEECCCCHHH
DQLRPETVLARPNPQLDNLLRSYEYRIGVGDVLMVTVWDHPELTTPAGQYRSASDTGNWV
HHCCCCEEEECCCCHHHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEE
NSDGTIFYPYIGKVQVAGKTLSQVRQDIANRLATYIESPQVDVSVAAFRSQKVYVTGEVT
CCCCCEEEEECCEEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEEC
KSGQQPITNIPLTVMDAINAAGGLAPDADWRNVVLTHNGKDTKVSLYALMQKGDLTQNHM
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCE
LYPGDILFVPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEAIGNAEGMSQAYSDATGVFV
ECCCCEEEEECCCCEEEEEEECCCCCCCEEECCCCCHHHHHHCCHHHHHHHHCCCCCEEE
IRQLKGDKQGKIANIYQLNAQDASAMVLGTEFELQPYDIVYVTSAPLVRWNRVISQLVPT
EEECCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHH
ITGVHDMTETVRYIRTWP
HHCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7896702 [H]