| Definition | Escherichia coli HS, complete genome. |
|---|---|
| Accession | NC_009800 |
| Length | 4,643,538 |
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The map label for this gene is 157161461
Identifier: 157161461
GI number: 157161461
Start: 2077958
End: 2080084
Strand: Reverse
Name: 157161461
Synonym: EcHS_A2094
Alternate gene names: NA
Gene position: 2080084-2077958 (Counterclockwise)
Preceding gene: 157161462
Following gene: 157161460
Centisome position: 44.8
GC content: 55.38
Gene sequence:
>2127_bases ATGTCCACAAACATATCTCAGTCCTCGGAGAACCAGAGTTTAACCCAGCGGAAGATTGAGCGTCTTCAACTGAGTGTCCG GAAAGGGTGGACACCGCCGCCGCGGATCAGCGTCCCGCAATGGGCCGATGACTACCGGAAGCTGGCGAAAGAAGCTGGCA GTACCTCCGGGAACTGGGAAACATCAACGGTTGAAATTGCCCGCGGTCCTATGCTGGCCGCGACGGAATCGGGCGTCCAC ATTATCACCGTGATGTGCTGTACCCAGTTAATGAAAACCGCGCTGCTGGAAAACCTGTTTGGTTATTTTGCGCACCTCGA CCCATGTCCGATTTTGCTCCTGCAGCCGAAGGAAGAGGCCGCTGAGCAGTTTTCCAAAGAACGCATCAGCCCGCTGGTTA GGGTAACGCCAGTTCTGCGTAACATCATAGGTGACTCAAAGCAGAAGAGTTCAAAAGAAACCATTCTGTATAAAGCTTTC ACCGGCGGATTTCTGGCGCTGGCCGGCGCCGGTAGTCCAGATAACCTTGCGCGCCGTCCGATCCGTGTTCTGCTGGCAGA TGAGGTGGATAAATATCCGATTACCCGTGAGGGCGATCCCATCGCTCTGGCGGAAGAGCGAACCGCCACATTTGGCCTTA ACTGGCTGTCCGTGCGGGCTTGTTCGCCGACGATCGAAGATGAAAGCCGGATTGCTGACAGTTACGAAGATTCAGATCAG CGGCGGGCCTCTGTAGTTTGCCCCCATTGCGGGCACCGACAGTTCCTTGATTTCTTCAAACATGTTCAATGGCCAAAAGA AGGTGATAAGCACCTGACCAAAGCGGCCATGATCCATTGTGAATGTTGTGGTGCTGGCTGGTCAGAGGGTGAGCGTCTGC GGGCATTACAGACAATCCGCTGGCATCAGACCAAACCGTTTGAATGTTGTGGTTCCCGCCATTCACCATTAATGGAATAC GACCAGAAATGGCATGAAGGAGACGAGGGCAGTGTTGATGCCGTCTGGCGCTGGTCAGAGTCGGAACGGCATGCCGTATA CCGGGCGATTTGCCCGGACTGCGGGGCCGAGGCGCTGGATAATCACCACGCCGGGTACCAGGCGTCAAAACTCTTCAGTC CCTGGCAAAAAGACAAGCCATCGGACATTGCAAAGAAATACCTCGATGCGAAAGGGGATCCGGATAAGGAACAGGCCTGG TGGAACACCCAGATGGGGTTGCCGCACCGGCCTAACCACGGGAAACAGCTCCCGGTTGATGTCCTGCTGGCGCGCCGTGA AGTCTTCCCGGCCGTCGTTCCTGATGGCGTGGCATTGTTAACTGCGGGCGTCGATACTCAGGATGACCGATTCGAAATCA CGATCACTGGCTGGGGGCGGGACGAGGAATCGTGGTCAGTTGCGCATGACGTCATTTATGGCGATCTGGAGACTGAGGAA CCCTGGAAGCGCCTCGATGCGTACCTGAAACAGATATGGCGACGCGGCGACGGGCGAGGGCTGAATATTCTGGCTGCATG TATGGACTCCGGCGGTCACCACACGCAAAAGGTTTATGAGTTCTGCAAAGATCGCCTTGGGCGCCGCGTCTGGGCTATCA AGGGCGAATCTGCGCAGGGTGGGAAACGCAACCCCGTCTGGCCAACCAAGCGACCGACATCAAAAAGTAAAGCCAGCTTC AGGCCAATTATACTTGGCGTGAACTCTGCGAAAGATGTTGTCCGTGGTCGTCTGCATCTTGAACCGCCAGCTTTAGGTAC TGCCGGTGCGGGCTATATGCACTTCCCGGATGATCGTGACCTCGGCTATTTCAACCAGCTGCTGGCCGAGCGACTGGTTT ATAAAGTGGTGGCCGGTCAGCGATTCAGTGTCTGGGAGCCTATCCCCGGACGGGCGAACGAAGCACTCGACTGCCTCGTT TACAGCTATGCCGCGTTGTGTGGGCTGAAACATATGGGATTAAAACTCAATGTTCGGGCCGCTAACCTTCAGGCCGATCC CGATAAGTTCCTGCCGGCGCCAGCCGAGCCAGAAGAAAAAATCAATTACGAATTACCGGGTGCCATCGTGGATGAGGCTA TGGCTCCTGTTAAGCGTAAGAACATTTCTAAACTCCTGCCGCAATAA
Upstream 100 bases:
>100_bases CAGCGTGATGCCTGGCTGAACTGGCCTTCACGCGTGGCACCGCTGATAGCCGCCGATCTGAATGTGCCGGCGGACAGGAT GACAGAGGTGCTGATTGAAC
Downstream 100 bases:
>100_bases GGAAAACCATGTTTAACCGAAACACGAGCTTACTTGCTGGTGGGATGACTGATGAGCAGCTCAGAGACGCTCTGCAGAAA GCGCAGCAGGCTTATATCGA
Product: Phage terminase large subunit (GpA)
Products: NA
Alternate protein names: Phage Terminase GpA; Terminase GpA; Terminase Large Subunit; Bacteriophage Tail Assembly Protein; DNA Packaging Protein Of Prophage; Prophage LambdaW1 Terminase Large Subunit; DNA Packaging Protein Of Putative Prophage; Bacteriophage Tail Assembly Protein-Like Protein; Phage-Related Terminase Large Subunit; Prophage; DNA Packaging R; Bacteriophage Terminase Large Subunit; Large Subunit Of DNA Packaging Dimer; Phage Terminase GpA Family Protein; Terminase Gpa; Terminase Large Subunit Of Phage Lambda; DNA Packaging Protein
Number of amino acids: Translated: 708; Mature: 707
Protein sequence:
>708_residues MSTNISQSSENQSLTQRKIERLQLSVRKGWTPPPRISVPQWADDYRKLAKEAGSTSGNWETSTVEIARGPMLAATESGVH IITVMCCTQLMKTALLENLFGYFAHLDPCPILLLQPKEEAAEQFSKERISPLVRVTPVLRNIIGDSKQKSSKETILYKAF TGGFLALAGAGSPDNLARRPIRVLLADEVDKYPITREGDPIALAEERTATFGLNWLSVRACSPTIEDESRIADSYEDSDQ RRASVVCPHCGHRQFLDFFKHVQWPKEGDKHLTKAAMIHCECCGAGWSEGERLRALQTIRWHQTKPFECCGSRHSPLMEY DQKWHEGDEGSVDAVWRWSESERHAVYRAICPDCGAEALDNHHAGYQASKLFSPWQKDKPSDIAKKYLDAKGDPDKEQAW WNTQMGLPHRPNHGKQLPVDVLLARREVFPAVVPDGVALLTAGVDTQDDRFEITITGWGRDEESWSVAHDVIYGDLETEE PWKRLDAYLKQIWRRGDGRGLNILAACMDSGGHHTQKVYEFCKDRLGRRVWAIKGESAQGGKRNPVWPTKRPTSKSKASF RPIILGVNSAKDVVRGRLHLEPPALGTAGAGYMHFPDDRDLGYFNQLLAERLVYKVVAGQRFSVWEPIPGRANEALDCLV YSYAALCGLKHMGLKLNVRAANLQADPDKFLPAPAEPEEKINYELPGAIVDEAMAPVKRKNISKLLPQ
Sequences:
>Translated_708_residues MSTNISQSSENQSLTQRKIERLQLSVRKGWTPPPRISVPQWADDYRKLAKEAGSTSGNWETSTVEIARGPMLAATESGVH IITVMCCTQLMKTALLENLFGYFAHLDPCPILLLQPKEEAAEQFSKERISPLVRVTPVLRNIIGDSKQKSSKETILYKAF TGGFLALAGAGSPDNLARRPIRVLLADEVDKYPITREGDPIALAEERTATFGLNWLSVRACSPTIEDESRIADSYEDSDQ RRASVVCPHCGHRQFLDFFKHVQWPKEGDKHLTKAAMIHCECCGAGWSEGERLRALQTIRWHQTKPFECCGSRHSPLMEY DQKWHEGDEGSVDAVWRWSESERHAVYRAICPDCGAEALDNHHAGYQASKLFSPWQKDKPSDIAKKYLDAKGDPDKEQAW WNTQMGLPHRPNHGKQLPVDVLLARREVFPAVVPDGVALLTAGVDTQDDRFEITITGWGRDEESWSVAHDVIYGDLETEE PWKRLDAYLKQIWRRGDGRGLNILAACMDSGGHHTQKVYEFCKDRLGRRVWAIKGESAQGGKRNPVWPTKRPTSKSKASF RPIILGVNSAKDVVRGRLHLEPPALGTAGAGYMHFPDDRDLGYFNQLLAERLVYKVVAGQRFSVWEPIPGRANEALDCLV YSYAALCGLKHMGLKLNVRAANLQADPDKFLPAPAEPEEKINYELPGAIVDEAMAPVKRKNISKLLPQ >Mature_707_residues STNISQSSENQSLTQRKIERLQLSVRKGWTPPPRISVPQWADDYRKLAKEAGSTSGNWETSTVEIARGPMLAATESGVHI ITVMCCTQLMKTALLENLFGYFAHLDPCPILLLQPKEEAAEQFSKERISPLVRVTPVLRNIIGDSKQKSSKETILYKAFT GGFLALAGAGSPDNLARRPIRVLLADEVDKYPITREGDPIALAEERTATFGLNWLSVRACSPTIEDESRIADSYEDSDQR RASVVCPHCGHRQFLDFFKHVQWPKEGDKHLTKAAMIHCECCGAGWSEGERLRALQTIRWHQTKPFECCGSRHSPLMEYD QKWHEGDEGSVDAVWRWSESERHAVYRAICPDCGAEALDNHHAGYQASKLFSPWQKDKPSDIAKKYLDAKGDPDKEQAWW NTQMGLPHRPNHGKQLPVDVLLARREVFPAVVPDGVALLTAGVDTQDDRFEITITGWGRDEESWSVAHDVIYGDLETEEP WKRLDAYLKQIWRRGDGRGLNILAACMDSGGHHTQKVYEFCKDRLGRRVWAIKGESAQGGKRNPVWPTKRPTSKSKASFR PIILGVNSAKDVVRGRLHLEPPALGTAGAGYMHFPDDRDLGYFNQLLAERLVYKVVAGQRFSVWEPIPGRANEALDCLVY SYAALCGLKHMGLKLNVRAANLQADPDKFLPAPAEPEEKINYELPGAIVDEAMAPVKRKNISKLLPQ
Specific function: Unknown
COG id: COG5525
COG function: function code R; Bacteriophage tail assembly protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79385; Mature: 79254
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNISQSSENQSLTQRKIERLQLSVRKGWTPPPRISVPQWADDYRKLAKEAGSTSGNWE CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC TSTVEIARGPMLAATESGVHIITVMCCTQLMKTALLENLFGYFAHLDPCPILLLQPKEEA CCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHH AEQFSKERISPLVRVTPVLRNIIGDSKQKSSKETILYKAFTGGFLALAGAGSPDNLARRP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCCCCHHHHHHH IRVLLADEVDKYPITREGDPIALAEERTATFGLNWLSVRACSPTIEDESRIADSYEDSDQ HHHHHHHCCCCCCCCCCCCCEEEECCCCCEECCCEEEEEECCCCCCCHHHHHHCCCCCCH RRASVVCPHCGHRQFLDFFKHVQWPKEGDKHLTKAAMIHCECCGAGWSEGERLRALQTIR HHHEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHH WHQTKPFECCGSRHSPLMEYDQKWHEGDEGSVDAVWRWSESERHAVYRAICPDCGAEALD HCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHH NHHAGYQASKLFSPWQKDKPSDIAKKYLDAKGDPDKEQAWWNTQMGLPHRPNHGKQLPVD CCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHH VLLARREVFPAVVPDGVALLTAGVDTQDDRFEITITGWGRDEESWSVAHDVIYGDLETEE HHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHEECCCCCCC PWKRLDAYLKQIWRRGDGRGLNILAACMDSGGHHTQKVYEFCKDRLGRRVWAIKGESAQG HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCC GKRNPVWPTKRPTSKSKASFRPIILGVNSAKDVVRGRLHLEPPALGTAGAGYMHFPDDRD CCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCEEECCCCCCCCCCCCCCCCCCCC LGYFNQLLAERLVYKVVAGQRFSVWEPIPGRANEALDCLVYSYAALCGLKHMGLKLNVRA CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEE ANLQADPDKFLPAPAEPEEKINYELPGAIVDEAMAPVKRKNISKLLPQ ECCCCCHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STNISQSSENQSLTQRKIERLQLSVRKGWTPPPRISVPQWADDYRKLAKEAGSTSGNWE CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC TSTVEIARGPMLAATESGVHIITVMCCTQLMKTALLENLFGYFAHLDPCPILLLQPKEEA CCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHH AEQFSKERISPLVRVTPVLRNIIGDSKQKSSKETILYKAFTGGFLALAGAGSPDNLARRP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCCCCHHHHHHH IRVLLADEVDKYPITREGDPIALAEERTATFGLNWLSVRACSPTIEDESRIADSYEDSDQ HHHHHHHCCCCCCCCCCCCCEEEECCCCCEECCCEEEEEECCCCCCCHHHHHHCCCCCCH RRASVVCPHCGHRQFLDFFKHVQWPKEGDKHLTKAAMIHCECCGAGWSEGERLRALQTIR HHHEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHH WHQTKPFECCGSRHSPLMEYDQKWHEGDEGSVDAVWRWSESERHAVYRAICPDCGAEALD HCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHH NHHAGYQASKLFSPWQKDKPSDIAKKYLDAKGDPDKEQAWWNTQMGLPHRPNHGKQLPVD CCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHH VLLARREVFPAVVPDGVALLTAGVDTQDDRFEITITGWGRDEESWSVAHDVIYGDLETEE HHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHEECCCCCCC PWKRLDAYLKQIWRRGDGRGLNILAACMDSGGHHTQKVYEFCKDRLGRRVWAIKGESAQG HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCC GKRNPVWPTKRPTSKSKASFRPIILGVNSAKDVVRGRLHLEPPALGTAGAGYMHFPDDRD CCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCEEECCCCCCCCCCCCCCCCCCCC LGYFNQLLAERLVYKVVAGQRFSVWEPIPGRANEALDCLVYSYAALCGLKHMGLKLNVRA CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEE ANLQADPDKFLPAPAEPEEKINYELPGAIVDEAMAPVKRKNISKLLPQ ECCCCCHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA