Click here to switch to the map view.

The map label for this gene is yebS [H]

Identifier: 157161300

GI number: 157161300

Start: 1935235

End: 1936518

Strand: Direct

Name: yebS [H]

Synonym: EcHS_A1924

Alternate gene names: 157161300

Gene position: 1935235-1936518 (Clockwise)

Preceding gene: 157161295

Following gene: 157161301

Centisome position: 41.68

GC content: 50.78

Gene sequence:

>1284_bases
ATGGCTCTTAACACACCACAAATTACGCCGACAAAAAAGATAACAGTGAGGTCAATCGGCGAGGAACTGCCGCGTGGTGA
TTACCAACGTTGCCCGCAATGTGACATGCTGTTTAGCCTGCCCGAGATAAATTCTCATCAGAGTGCCTATTGTCCGCGCT
GTCAGGCAAAAATTCGCGACGGGCGCGACTGGTCGCTAACGCGCCTGGCGGCAATGGCTTTCACCATGCTGTTGCTGATG
CCGTTTGCCTGGGGCGAACCGCTGTTGCATATCTGGCTGTTAGGCATTCGTATTGACGCCAACGTTATGCAAGGCATCTG
GCAAATGACCAAACAGGGCGATGCGATAACGGGGTCGATGGTCTTTTTCTGCGTTATCGGTGCCCCCCTCATTCTGGTGA
CCTCCATAGCTTATTTATGGTTTGGTAACCGACTGGGAATGAATCTACGCCCGGTACTGCTGATGCTTGAGCGACTTAAA
GAGTGGGTAATGCTGGATATCTACCTGGTCGGCATTGGCGTTGCTTCTATAAAGGTACAGGATTATGCCCATATCCAGGC
GGGTGTGGGCTTGTTCTCTTTTGTGGCGTTGGTGATTTTAACGACGGTGACGTTGTCACATCTTAATGTCGAGGAGCTGT
GGGAGCGATTTTATCCGCAGCGCCCCGCTACGCGTAGGGACGAGAAACTCCGTGTCTGTCTTGGGTGCCATTTTACCGGC
TATCCTGATCAGCGTGGTCGCTGCCCGCGTTGCCATATCCCGCTACGCGTGCGTCGCCGTCATAGTTTGCAAAAATGCTG
GGCGGCGCTGTTAGCGTCAATCGTTTTGTTGTTACCTGCCAACCTGTTGCCTATTTCTATCATTTATCTGAACGGAGGAC
GGCAGGAAGATACAATTCTTTCCGGAATTATGTCGCTGGCAAGTAGCAACATTGCGGTTGCGGGAATCGTGTTTATCGCC
AGTATTCTGGTACCGTTTACTAAAGTGATCGTCATGTTCACTTTACTGTTGAGCATTCATTTTAAATGCCAGCAAGGTTT
ACGCACACGCATTCTGTTACTGCGGATGGTGACCTGGATTGGTCGCTGGTCGATGCTCGACCTGTTTGTCATATCTTTAA
CCATGTCGCTGATTAATCGCGATCAGATCCTCGCTTTTACTATGGGACCGGCTGCGTTTTATTTCGGCGCAGCGGTAATT
TTGACTATTCTTGCTGTGGAATGGCTGGACAGCCGCTTACTTTGGGATGCACATGAGTCAGGAAACGCCCGCTTCGACGA
CTGA

Upstream 100 bases:

>100_bases
ACTGCCAGCCTATTAAAATAAGCATTAAATGCGTTAATGCTCAAGATCATTCCAATCATGGGTTAATATTAATGTTAATT
CTTATTACATTTGGCACGTC

Downstream 100 bases:

>100_bases
AGCGCAGATTAAAAATAAACGCCGTATCTCACCTTTCTGGCTGCTGCCTTTCATCGCGCTAATGATTGCCGGTTGGCTGA
TTTGGGACAGTTATCAGGAC

Product: PqiA family integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MALNTPQITPTKKITVRSIGEELPRGDYQRCPQCDMLFSLPEINSHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLM
PFAWGEPLLHIWLLGIRIDANVMQGIWQMTKQGDAITGSMVFFCVIGAPLILVTSIAYLWFGNRLGMNLRPVLLMLERLK
EWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERFYPQRPATRRDEKLRVCLGCHFTG
YPDQRGRCPRCHIPLRVRRRHSLQKCWAALLASIVLLLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIA
SILVPFTKVIVMFTLLLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYFGAAVI
LTILAVEWLDSRLLWDAHESGNARFDD

Sequences:

>Translated_427_residues
MALNTPQITPTKKITVRSIGEELPRGDYQRCPQCDMLFSLPEINSHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLM
PFAWGEPLLHIWLLGIRIDANVMQGIWQMTKQGDAITGSMVFFCVIGAPLILVTSIAYLWFGNRLGMNLRPVLLMLERLK
EWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERFYPQRPATRRDEKLRVCLGCHFTG
YPDQRGRCPRCHIPLRVRRRHSLQKCWAALLASIVLLLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIA
SILVPFTKVIVMFTLLLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYFGAAVI
LTILAVEWLDSRLLWDAHESGNARFDD
>Mature_426_residues
ALNTPQITPTKKITVRSIGEELPRGDYQRCPQCDMLFSLPEINSHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMP
FAWGEPLLHIWLLGIRIDANVMQGIWQMTKQGDAITGSMVFFCVIGAPLILVTSIAYLWFGNRLGMNLRPVLLMLERLKE
WVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERFYPQRPATRRDEKLRVCLGCHFTGY
PDQRGRCPRCHIPLRVRRRHSLQKCWAALLASIVLLLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIAS
ILVPFTKVIVMFTLLLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYFGAAVIL
TILAVEWLDSRLLWDAHESGNARFDD

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1788137, Length=427, Percent_Identity=99.5316159250585, Blast_Score=869, Evalue=0.0,
Organism=Escherichia coli, GI1787183, Length=397, Percent_Identity=29.7229219143577, Blast_Score=154, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR011031
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 48276; Mature: 48145

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALNTPQITPTKKITVRSIGEELPRGDYQRCPQCDMLFSLPEINSHQSAYCPRCQAKIRD
CCCCCCCCCCCCHHHHHHHHHHCCCCCHHCCCCCCCEECCCCCCCCCCCCCCHHHHHCCC
GRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIRIDANVMQGIWQMTKQGDAITGSM
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECHHHHHHHHHHHHCCCCCHHHH
VFFCVIGAPLILVTSIAYLWFGNRLGMNLRPVLLMLERLKEWVMLDIYLVGIGVASIKVQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEH
DYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERFYPQRPATRRDEKLRVCLGCHFTG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCC
YPDQRGRCPRCHIPLRVRRRHSLQKCWAALLASIVLLLPANLLPISIIYLNGGRQEDTIL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHH
SGIMSLASSNIAVAGIVFIASILVPFTKVIVMFTLLLSIHFKCQQGLRTRILLLRMVTWI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYFGAAVILTILAVEWLDSRLLWDAHES
CCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
GNARFDD
CCCCCCC
>Mature Secondary Structure 
ALNTPQITPTKKITVRSIGEELPRGDYQRCPQCDMLFSLPEINSHQSAYCPRCQAKIRD
CCCCCCCCCCCHHHHHHHHHHCCCCCHHCCCCCCCEECCCCCCCCCCCCCCHHHHHCCC
GRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIRIDANVMQGIWQMTKQGDAITGSM
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECHHHHHHHHHHHHCCCCCHHHH
VFFCVIGAPLILVTSIAYLWFGNRLGMNLRPVLLMLERLKEWVMLDIYLVGIGVASIKVQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEH
DYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERFYPQRPATRRDEKLRVCLGCHFTG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCC
YPDQRGRCPRCHIPLRVRRRHSLQKCWAALLASIVLLLPANLLPISIIYLNGGRQEDTIL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHH
SGIMSLASSNIAVAGIVFIASILVPFTKVIVMFTLLLSIHFKCQQGLRTRILLLRMVTWI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYFGAAVILTILAVEWLDSRLLWDAHES
CCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
GNARFDD
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]