| Definition | Escherichia coli HS, complete genome. |
|---|---|
| Accession | NC_009800 |
| Length | 4,643,538 |
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The map label for this gene is chbF [H]
Identifier: 157161195
GI number: 157161195
Start: 1835229
End: 1836581
Strand: Reverse
Name: chbF [H]
Synonym: EcHS_A1816
Alternate gene names: 157161195
Gene position: 1836581-1835229 (Counterclockwise)
Preceding gene: 157161196
Following gene: 157161194
Centisome position: 39.55
GC content: 46.93
Gene sequence:
>1353_bases ATGAGCCAGAAATTAAAAGTCGTCACTATTGGTGGCGGGAGCAGCTATACCCCGGAGTTACTGGAAGGATTTATTAAGCG TTATCACGAATTGCCGGTCAGCGAATTATGGCTGGTGGATGTCGAAGGTGGTAAAGCGAAACTGGATATTATTTTCGATC TCTGCCAACGGATGATTGATAACGCTGGCGTCCCGATGAAGCTTTATAAAACGCTGGATCGCCGCGAAGCATTGAAAGAT GCTGATTTCGTTACTACCCAACTGCGCGTTGGCCAATTACCGGCGCGTGAACTGGATGAACGTATTCCATTAAGTCATGG TTATCTTGGTCAGGAAACCAACGGCGCGGGCGGTTTGTTTAAAGGTCTGCGTACCATTCCGGTGATTTTTGACATCGTAA AAGATGTCGAAGAACTTTGTCCGAATGCATGGGTGATTAACTTCACTAACCCGGCGGGAATGGTCACTGAAGCCGTTTAT CGTCATACCGGATTTAAACGCTTTATCGGCGTGTGTAATATTCCGATCGGCATGAAGATGTTTATTCACGATGTTCTGAT GCTGAAAGACAGCGATGATTTATCTATCGATTTGTTCGGCCTCAACCATATGGTGTTCATTAAGGATGTGCTGGTAAATG GCAAGTCGCGCTTTGCCGAATTGCTTGATGGTGTGGCGTCAGGGCAGTTAAAAGCGTCCTCTGTAAAAAATATTTTCGAT CTGCCATTTAGTGAGGGCTTAATTCGTTCGTTGAATCTGCTGCCATGTTCTTATCTGCTGTATTACTTCAAGCAGAAAGA GATGCTGGCTATTGAAATGGGCGAATACTACAAAGGCGGCGCACGAGCGCAGGTAGTACAGAAAGTCGAGAAACAACTTT TTGAGCTGTATAAAAACCCGGAGTTGAAAGTTAAGCCGAAAGAACTGGAACAGCGCGGTGGGGCTTATTACTCTGATGCA GCGTGCGAAGTGATCAACGCTATCTACAACGACAAGCAAGCAGAACATTACGTTAATATCCCGCATCATGGGCATATTGA TAATATTCCGGCAGACTGGGCGGTAGAAATGACCTGTAAGCTGGGGCGCGATGGCGCGACGCCACATCCGCGCATTACGC ATTTCGATGATAAAGTAATGGGGCTGATTCACACCATTAAAGGCTTCGAGATTGCTGCCAGTAACGCCGCACTTAGCGGA GAATTTAACGATGTGTTACTGGCGCTAAACCTTAGTCCGTTGGTGCATTCCGATCGCGATGCTGAGCTGCTGGCACGCGA GATGATTCTGGCGCACGAGAAATGGCTGCCAAACTTTGCCGACTGCATCGCAGAGCTTAAAAAAGCACATTAA
Upstream 100 bases:
>100_bases TATACCTGACAATTCACATATCTGTCCTGTTGCTGGATTATTTATGTCCGGGGGGGGCAGATATGCCAGATATCAGTATT CTGTACTGAAGGGAGAAATT
Downstream 100 bases:
>100_bases CCGAGGCTGATTATGGAACGCTTACTGATTGTTAATGCCGATGATTTTGGCTTAAGCAAAGGTCAGAACTACGGCATTAT CGAGGCCTGTCGCAATGGGA
Product: 6-phospho-beta-glucosidase
Products: NA
Alternate protein names: Cellobiose-6-phosphate hydrolase; Phospho-chitobiase [H]
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MSQKLKVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEGGKAKLDIIFDLCQRMIDNAGVPMKLYKTLDRREALKD ADFVTTQLRVGQLPARELDERIPLSHGYLGQETNGAGGLFKGLRTIPVIFDIVKDVEELCPNAWVINFTNPAGMVTEAVY RHTGFKRFIGVCNIPIGMKMFIHDVLMLKDSDDLSIDLFGLNHMVFIKDVLVNGKSRFAELLDGVASGQLKASSVKNIFD LPFSEGLIRSLNLLPCSYLLYYFKQKEMLAIEMGEYYKGGARAQVVQKVEKQLFELYKNPELKVKPKELEQRGGAYYSDA ACEVINAIYNDKQAEHYVNIPHHGHIDNIPADWAVEMTCKLGRDGATPHPRITHFDDKVMGLIHTIKGFEIAASNAALSG EFNDVLLALNLSPLVHSDRDAELLAREMILAHEKWLPNFADCIAELKKAH
Sequences:
>Translated_450_residues MSQKLKVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEGGKAKLDIIFDLCQRMIDNAGVPMKLYKTLDRREALKD ADFVTTQLRVGQLPARELDERIPLSHGYLGQETNGAGGLFKGLRTIPVIFDIVKDVEELCPNAWVINFTNPAGMVTEAVY RHTGFKRFIGVCNIPIGMKMFIHDVLMLKDSDDLSIDLFGLNHMVFIKDVLVNGKSRFAELLDGVASGQLKASSVKNIFD LPFSEGLIRSLNLLPCSYLLYYFKQKEMLAIEMGEYYKGGARAQVVQKVEKQLFELYKNPELKVKPKELEQRGGAYYSDA ACEVINAIYNDKQAEHYVNIPHHGHIDNIPADWAVEMTCKLGRDGATPHPRITHFDDKVMGLIHTIKGFEIAASNAALSG EFNDVLLALNLSPLVHSDRDAELLAREMILAHEKWLPNFADCIAELKKAH >Mature_449_residues SQKLKVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEGGKAKLDIIFDLCQRMIDNAGVPMKLYKTLDRREALKDA DFVTTQLRVGQLPARELDERIPLSHGYLGQETNGAGGLFKGLRTIPVIFDIVKDVEELCPNAWVINFTNPAGMVTEAVYR HTGFKRFIGVCNIPIGMKMFIHDVLMLKDSDDLSIDLFGLNHMVFIKDVLVNGKSRFAELLDGVASGQLKASSVKNIFDL PFSEGLIRSLNLLPCSYLLYYFKQKEMLAIEMGEYYKGGARAQVVQKVEKQLFELYKNPELKVKPKELEQRGGAYYSDAA CEVINAIYNDKQAEHYVNIPHHGHIDNIPADWAVEMTCKLGRDGATPHPRITHFDDKVMGLIHTIKGFEIAASNAALSGE FNDVLLALNLSPLVHSDRDAELLAREMILAHEKWLPNFADCIAELKKAH
Specific function: Hydrolyzes a wide variety of P-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, gentiobiose-6P, methyl- beta-glucoside-6P and p-nitrophenyl-beta-D-glucopyranoside-6P. Is also able to hydrolyze phospho-N,N'-diacetylchitobiose [H]
COG id: COG1486
COG function: function code G; Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 4 family [H]
Homologues:
Organism=Escherichia coli, GI1788029, Length=450, Percent_Identity=99.1111111111111, Blast_Score=921, Evalue=0.0, Organism=Escherichia coli, GI1790560, Length=459, Percent_Identity=25.4901960784314, Blast_Score=120, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019802 - InterPro: IPR001088 - InterPro: IPR022616 - InterPro: IPR015955 - InterPro: IPR016040 [H]
Pfam domain/function: PF02056 Glyco_hydro_4; PF11975 Glyco_hydro_4C [H]
EC number: =3.2.1.86 [H]
Molecular weight: Translated: 50463; Mature: 50332
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS01324 GLYCOSYL_HYDROL_F4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKLKVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEGGKAKLDIIFDLCQRMID CCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHH NAGVPMKLYKTLDRREALKDADFVTTQLRVGQLPARELDERIPLSHGYLGQETNGAGGLF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHH KGLRTIPVIFDIVKDVEELCPNAWVINFTNPAGMVTEAVYRHTGFKRFIGVCNIPIGMKM HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHH FIHDVLMLKDSDDLSIDLFGLNHMVFIKDVLVNGKSRFAELLDGVASGQLKASSVKNIFD HHHHHHHEECCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHC LPFSEGLIRSLNLLPCSYLLYYFKQKEMLAIEMGEYYKGGARAQVVQKVEKQLFELYKNP CCCHHHHHHHHHCCHHHHHHHHHHCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHHHCCC ELKVKPKELEQRGGAYYSDAACEVINAIYNDKQAEHYVNIPHHGHIDNIPADWAVEMTCK CCEECHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCEEEEEEE LGRDGATPHPRITHFDDKVMGLIHTIKGFEIAASNAALSGEFNDVLLALNLSPLVHSDRD CCCCCCCCCCCEECCCHHHHHHHHHHCCCEEEECCCEECCCCCCEEEEEECCHHHCCCCC AELLAREMILAHEKWLPNFADCIAELKKAH HHHHHHHHHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure SQKLKVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEGGKAKLDIIFDLCQRMID CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHH NAGVPMKLYKTLDRREALKDADFVTTQLRVGQLPARELDERIPLSHGYLGQETNGAGGLF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHH KGLRTIPVIFDIVKDVEELCPNAWVINFTNPAGMVTEAVYRHTGFKRFIGVCNIPIGMKM HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHH FIHDVLMLKDSDDLSIDLFGLNHMVFIKDVLVNGKSRFAELLDGVASGQLKASSVKNIFD HHHHHHHEECCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHC LPFSEGLIRSLNLLPCSYLLYYFKQKEMLAIEMGEYYKGGARAQVVQKVEKQLFELYKNP CCCHHHHHHHHHCCHHHHHHHHHHCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHHHCCC ELKVKPKELEQRGGAYYSDAACEVINAIYNDKQAEHYVNIPHHGHIDNIPADWAVEMTCK CCEECHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCEEEEEEE LGRDGATPHPRITHFDDKVMGLIHTIKGFEIAASNAALSGEFNDVLLALNLSPLVHSDRD CCCCCCCCCCCEECCCHHHHHHHHHHCCCEEEECCCEECCCCCCEEEEEECCHHHCCCCC AELLAREMILAHEKWLPNFADCIAELKKAH HHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2179047; 9097039; 9278503; 8121401; 10572139; 9405618; 10913117 [H]