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The map label for this gene is uidC

Identifier: 157161076

GI number: 157161076

Start: 1713539

End: 1714804

Strand: Reverse

Name: uidC

Synonym: EcHS_A1690

Alternate gene names: 157161076

Gene position: 1714804-1713539 (Counterclockwise)

Preceding gene: 157161077

Following gene: 157161073

Centisome position: 36.93

GC content: 47.16

Gene sequence:

>1266_bases
ATGAGAAAAATAGTGGCCATGGCCGTTATTTGCCTGACGGCTGCCTCTGGCCTTACCTCTGCTTATGCGGCGCAACTGGC
TGACGATGAAGCGGGACTACGCATCAGACTGAAAAACGAATTGCGCAGGGCGGATAAGCCCAGTGCTGGCGCGGGAAGAG
ATATTTACGCATGGGTACAGGGAGGATTGCTCGATTTCAATAGTGGTTATTATTCCAATATTATTGGCGTTGAAGGCGGG
GCGTATTATGTTTATAAATTAGGTGCTCGTGCTGATATGAGTACCCGGTGGTATCTTGATGGTGATAAAAGTTTTGGCTT
TGCTCTGGGGGCAGTAAAAATAAAACCCAGTGAAAATAGCCTGCTTAAATTAGGTCGCTTCGGGACGGATTATAGTTATG
GTAGCTTACCTTATCGTATTCCGTTAATGGCTGGCAGTTCGCAACGTACATTACCGACAGTTTCTGAAGGAGCATTAGGT
TATTGGGCTTTAACACCAAATATTGATCTGTGGGGAATGTGGCGTTCACGAGTATTTTTATGGACTGATTCAACAACCGG
TATTCGTGATGAAGGGGTGTATAACAGCCAGACGGGAAAATACGATAAACATCGCGCACGTTCTTTTTTAGCCGCCAGTT
GGCATGATGATACCAGTCGCTATTCTCTGGGGGCATCGGTACAGAAAGATGTTTCCAATCAGATACAAAGTATTCTCGAG
AAAAGCATACCGCTCGACCCGAATTATACGTTGAAAGGGGAGTTGCTCGGCTTTTACGCGCAGCTCGAAGGTTTAAGTCG
TAATACCAGCCAGCCCAATGAAACGGCGTTGGTTAGTGGACAATTGACCTGGAATGCGCCGTGGGGAAGCGTATTTGGCA
GTGGTGGTTATTTGCGCCATGCAATGAATGGTGCCGTGGTGGATACCGACATTGGCTATCCCTTTTCATTAAGTCTTGAT
CGTAACCGTGAAGGAATGCAGTCCTGGCAATTGGGCGTCAACTATCGTTTAACGCCGCAATTTACGCTGACATTTGCACC
GATTGTGACTCGCGGCTATGAATCCAGTAAACGAGATGTGCGGATTGAAGGCACGGGTATCTTAGGTGGTATGAACTATC
GGGTCAGCGAAGGGCCGTTACAAGGGATGAATTTCTTTCTTGCTGCCGATAAAGGGCGGGAAAAGCGCGATGGCAGTACG
CTGGGCGATCGCCTGAATTACTGGGATGTGAAAATGAGTATTCAGTATGACTTTATGCTGAAGTAA

Upstream 100 bases:

>100_bases
TGGTTGAAATTGATAATCGTAAAAAAGTGCAGCAGCAATTAATCAGCGATATCACTAATTAATATTCAATAAAAATAATC
AGAACATCAAAGGTGCAACT

Downstream 100 bases:

>100_bases
AAAATAACGCCGGAGAGAAAAATCTCCGGCGTTTTGTCTGTGAATTACTGCTGCGGAATAGCGGGTACGACCGGAACATT
TAATGCCGGCATTGCAAACA

Product: putative outer membrane porin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MRKIVAMAVICLTAASGLTSAYAAQLADDEAGLRIRLKNELRRADKPSAGAGRDIYAWVQGGLLDFNSGYYSNIIGVEGG
AYYVYKLGARADMSTRWYLDGDKSFGFALGAVKIKPSENSLLKLGRFGTDYSYGSLPYRIPLMAGSSQRTLPTVSEGALG
YWALTPNIDLWGMWRSRVFLWTDSTTGIRDEGVYNSQTGKYDKHRARSFLAASWHDDTSRYSLGASVQKDVSNQIQSILE
KSIPLDPNYTLKGELLGFYAQLEGLSRNTSQPNETALVSGQLTWNAPWGSVFGSGGYLRHAMNGAVVDTDIGYPFSLSLD
RNREGMQSWQLGVNYRLTPQFTLTFAPIVTRGYESSKRDVRIEGTGILGGMNYRVSEGPLQGMNFFLAADKGREKRDGST
LGDRLNYWDVKMSIQYDFMLK

Sequences:

>Translated_421_residues
MRKIVAMAVICLTAASGLTSAYAAQLADDEAGLRIRLKNELRRADKPSAGAGRDIYAWVQGGLLDFNSGYYSNIIGVEGG
AYYVYKLGARADMSTRWYLDGDKSFGFALGAVKIKPSENSLLKLGRFGTDYSYGSLPYRIPLMAGSSQRTLPTVSEGALG
YWALTPNIDLWGMWRSRVFLWTDSTTGIRDEGVYNSQTGKYDKHRARSFLAASWHDDTSRYSLGASVQKDVSNQIQSILE
KSIPLDPNYTLKGELLGFYAQLEGLSRNTSQPNETALVSGQLTWNAPWGSVFGSGGYLRHAMNGAVVDTDIGYPFSLSLD
RNREGMQSWQLGVNYRLTPQFTLTFAPIVTRGYESSKRDVRIEGTGILGGMNYRVSEGPLQGMNFFLAADKGREKRDGST
LGDRLNYWDVKMSIQYDFMLK
>Mature_421_residues
MRKIVAMAVICLTAASGLTSAYAAQLADDEAGLRIRLKNELRRADKPSAGAGRDIYAWVQGGLLDFNSGYYSNIIGVEGG
AYYVYKLGARADMSTRWYLDGDKSFGFALGAVKIKPSENSLLKLGRFGTDYSYGSLPYRIPLMAGSSQRTLPTVSEGALG
YWALTPNIDLWGMWRSRVFLWTDSTTGIRDEGVYNSQTGKYDKHRARSFLAASWHDDTSRYSLGASVQKDVSNQIQSILE
KSIPLDPNYTLKGELLGFYAQLEGLSRNTSQPNETALVSGQLTWNAPWGSVFGSGGYLRHAMNGAVVDTDIGYPFSLSLD
RNREGMQSWQLGVNYRLTPQFTLTFAPIVTRGYESSKRDVRIEGTGILGGMNYRVSEGPLQGMNFFLAADKGREKRDGST
LGDRLNYWDVKMSIQYDFMLK

Specific function: Enhances the activity of the uidB (gusB) glucuronide transporter, on its own however it has no transport activity. Glucuronide transport does not occur in strain K12 due to a variant at position 100 of the uidB (gusB, AC P30868) protein

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081946, Length=421, Percent_Identity=100, Blast_Score=858, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UIDC_ECOLI (Q47706)

Other databases:

- EMBL:   M14641
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   A64918
- RefSeq:   AP_002236.1
- RefSeq:   NP_416132.2
- ProteinModelPortal:   Q47706
- DIP:   DIP-11088N
- MINT:   MINT-1299860
- STRING:   Q47706
- EnsemblBacteria:   EBESCT00000003899
- EnsemblBacteria:   EBESCT00000016337
- GeneID:   944820
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW1607
- KEGG:   eco:b1615
- EchoBASE:   EB2534
- EcoGene:   EG12668
- GeneTree:   EBGT00050000009900
- HOGENOM:   HBG467031
- OMA:   NYRVTPQ
- ProtClustDB:   PRK11379
- BioCyc:   EcoCyc:G6866-MONOMER
- Genevestigator:   Q47706
- InterPro:   IPR005318

Pfam domain/function: PF03573 OprD

EC number: NA

Molecular weight: Translated: 46648; Mature: 46648

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIVAMAVICLTAASGLTSAYAAQLADDEAGLRIRLKNELRRADKPSAGAGRDIYAWVQ
CHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEHHHHHCCCCCCCCCCCEEEEEEC
GGLLDFNSGYYSNIIGVEGGAYYVYKLGARADMSTRWYLDGDKSFGFALGAVKIKPSENS
CCEEECCCCCCCCEEECCCCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEECCCCCC
LLKLGRFGTDYSYGSLPYRIPLMAGSSQRTLPTVSEGALGYWALTPNIDLWGMWRSRVFL
EEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEEECEEEE
WTDSTTGIRDEGVYNSQTGKYDKHRARSFLAASWHDDTSRYSLGASVQKDVSNQIQSILE
EECCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCEECCCHHHHHHHHHHHHHHH
KSIPLDPNYTLKGELLGFYAQLEGLSRNTSQPNETALVSGQLTWNAPWGSVFGSGGYLRH
HCCCCCCCEEEEHHHHEEEHHHCCCCCCCCCCCCEEEEEEEEEECCCCHHHCCCCCEEEH
AMNGAVVDTDIGYPFSLSLDRNREGMQSWQLGVNYRLTPQFTLTFAPIVTRGYESSKRDV
HCCCCEEEECCCCCEEEEECCCCCCHHHHHCCCCEEECCEEEEEEEEHHCCCCCCCCCEE
RIEGTGILGGMNYRVSEGPLQGMNFFLAADKGREKRDGSTLGDRLNYWDVKMSIQYDFML
EEEEEEEEECCCEEECCCCCCCCEEEEEECCCCCCCCCCCHHCCCEEEEEEEEEEEEEEE
K
C
>Mature Secondary Structure
MRKIVAMAVICLTAASGLTSAYAAQLADDEAGLRIRLKNELRRADKPSAGAGRDIYAWVQ
CHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEHHHHHCCCCCCCCCCCEEEEEEC
GGLLDFNSGYYSNIIGVEGGAYYVYKLGARADMSTRWYLDGDKSFGFALGAVKIKPSENS
CCEEECCCCCCCCEEECCCCEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEECCCCCC
LLKLGRFGTDYSYGSLPYRIPLMAGSSQRTLPTVSEGALGYWALTPNIDLWGMWRSRVFL
EEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEEECEEEE
WTDSTTGIRDEGVYNSQTGKYDKHRARSFLAASWHDDTSRYSLGASVQKDVSNQIQSILE
EECCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCEECCCHHHHHHHHHHHHHHH
KSIPLDPNYTLKGELLGFYAQLEGLSRNTSQPNETALVSGQLTWNAPWGSVFGSGGYLRH
HCCCCCCCEEEEHHHHEEEHHHCCCCCCCCCCCCEEEEEEEEEECCCCHHHCCCCCEEEH
AMNGAVVDTDIGYPFSLSLDRNREGMQSWQLGVNYRLTPQFTLTFAPIVTRGYESSKRDV
HCCCCEEEECCCCCEEEEECCCCCCHHHHHCCCCEEECCEEEEEEEEHHCCCCCCCCCEE
RIEGTGILGGMNYRVSEGPLQGMNFFLAADKGREKRDGSTLGDRLNYWDVKMSIQYDFML
EEEEEEEEECCCEEECCCCCCCCEEEEEECCCCCCCCCCCHHCCCEEEEEEEEEEEEEEE
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503