| Definition | Escherichia coli E24377A, complete genome. |
|---|---|
| Accession | NC_009801 |
| Length | 4,979,619 |
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The map label for this gene is paaF [C]
Identifier: 157155836
GI number: 157155836
Start: 4765287
End: 4766063
Strand: Reverse
Name: paaF [C]
Synonym: EcE24377A_4769
Alternate gene names: 157155836
Gene position: 4766063-4765287 (Counterclockwise)
Preceding gene: 157156968
Following gene: 157155448
Centisome position: 95.71
GC content: 50.06
Gene sequence:
>777_bases ATGAGTGACCAACCCGTTCTGTTCAGCAGAGTGGCGGCTTCCTGCCGCCTGACATTGAACCGTGAAGATAAATGTCATGC TATTAACGAAGAGATGATCGAATCTCTCGACCATTATTTAAATGAAATTGAAAACGACACCACATTACGATTAGTCGAAT TAACGGCAACCGGCGATAAATTCTTTTGTGCGGGCGGCGATATTAAATCGTGGTCGGCCTATTCGCCATTAGATATGGGC AGAAAATGGATTAAACGCGGTAATGACGTTTTTAATCGCCTGCGAAACTTACCCCAATTAACCGTTGCGAATCTCAACGG TCATACCATCGGCGGTGGTATTGAACTGGCCTTGTGCTGCGATATTCGTATTGCCCGCCCCGGCGCGAAATTCTCTAACC CGGAAGTGATGCTCGGCATGGTGCCTGGCTGGATGGGCATTGAACGTGTGCTTAATCAGGTTGGTCCGGTGGTCGGTCGC CAGATGCTGATGCTGGGTAAACGCCTGACGGCGCAGGAAGCCCAGGCGGCGAATTTAATTGATGAAGTGGTAGAAATAGA ACAGGTGGAAAGCTGGATGGCGAACCAGTTAGCGCAGCTGGAAAAATGCGGTCCGGTGGCACTGGCGCATATTAAGCAAC TGATTCTGGCACTGGAAAATAAACATGCCGATTACCCGCACCAGCTACTGGCCGGATTAATGTCCGCCACTCAGGATTGC CAGCAGGCGACGCGCGCCTTTGCCGAAAAAAGTAGCGTGAGCTTCCATAATCAATAA
Upstream 100 bases:
>100_bases TGAACTGGAAATATTCTCGCCTTACTGGTGGCAGAAAGATATTAACAGCACGCTGGATATTAGCGTCGATCGCATCGCGC ATTATTGTTAAGGAATGATC
Downstream 100 bases:
>100_bases GGAAATTGTATGCGTAAGATAACAACCGCCGAGGCACTGGCGGCGCAAATTCAGGACGGCGCAACCATTGCCATTAGCGG TAACGGCGGCGGCATGGTGG
Product: enoyl-CoA hydratase/isomerase family protein
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSDQPVLFSRVAASCRLTLNREDKCHAINEEMIESLDHYLNEIENDTTLRLVELTATGDKFFCAGGDIKSWSAYSPLDMG RKWIKRGNDVFNRLRNLPQLTVANLNGHTIGGGIELALCCDIRIARPGAKFSNPEVMLGMVPGWMGIERVLNQVGPVVGR QMLMLGKRLTAQEAQAANLIDEVVEIEQVESWMANQLAQLEKCGPVALAHIKQLILALENKHADYPHQLLAGLMSATQDC QQATRAFAEKSSVSFHNQ
Sequences:
>Translated_258_residues MSDQPVLFSRVAASCRLTLNREDKCHAINEEMIESLDHYLNEIENDTTLRLVELTATGDKFFCAGGDIKSWSAYSPLDMG RKWIKRGNDVFNRLRNLPQLTVANLNGHTIGGGIELALCCDIRIARPGAKFSNPEVMLGMVPGWMGIERVLNQVGPVVGR QMLMLGKRLTAQEAQAANLIDEVVEIEQVESWMANQLAQLEKCGPVALAHIKQLILALENKHADYPHQLLAGLMSATQDC QQATRAFAEKSSVSFHNQ >Mature_257_residues SDQPVLFSRVAASCRLTLNREDKCHAINEEMIESLDHYLNEIENDTTLRLVELTATGDKFFCAGGDIKSWSAYSPLDMGR KWIKRGNDVFNRLRNLPQLTVANLNGHTIGGGIELALCCDIRIARPGAKFSNPEVMLGMVPGWMGIERVLNQVGPVVGRQ MLMLGKRLTAQEAQAANLIDEVVEIEQVESWMANQLAQLEKCGPVALAHIKQLILALENKHADYPHQLLAGLMSATQDCQ QATRAFAEKSSVSFHNQ
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=246, Percent_Identity=29.2682926829268, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI20127408, Length=164, Percent_Identity=29.2682926829268, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI4502327, Length=255, Percent_Identity=27.0588235294118, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI68989263, Length=183, Percent_Identity=30.6010928961749, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI70995211, Length=246, Percent_Identity=26.0162601626016, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI62530384, Length=177, Percent_Identity=29.3785310734463, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1787659, Length=247, Percent_Identity=28.7449392712551, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI221142681, Length=252, Percent_Identity=27.3809523809524, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1790281, Length=177, Percent_Identity=28.8135593220339, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1788597, Length=246, Percent_Identity=27.2357723577236, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI87082183, Length=265, Percent_Identity=25.6603773584906, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1788682, Length=164, Percent_Identity=27.4390243902439, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1787660, Length=249, Percent_Identity=32.1285140562249, Blast_Score=73, Evalue=1e-14, Organism=Caenorhabditis elegans, GI25145438, Length=255, Percent_Identity=30.1960784313725, Blast_Score=103, Evalue=7e-23, Organism=Caenorhabditis elegans, GI17540714, Length=192, Percent_Identity=28.6458333333333, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17554946, Length=237, Percent_Identity=24.0506329113924, Blast_Score=78, Evalue=3e-15, Organism=Caenorhabditis elegans, GI25141363, Length=184, Percent_Identity=26.6304347826087, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17535521, Length=253, Percent_Identity=24.1106719367589, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17549921, Length=199, Percent_Identity=24.1206030150754, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI25144276, Length=129, Percent_Identity=30.2325581395349, Blast_Score=67, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17508951, Length=129, Percent_Identity=30.2325581395349, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17508953, Length=129, Percent_Identity=30.2325581395349, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17536985, Length=220, Percent_Identity=26.3636363636364, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17540306, Length=254, Percent_Identity=25.5905511811024, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25144157, Length=193, Percent_Identity=27.4611398963731, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25144160, Length=193, Percent_Identity=27.4611398963731, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17558304, Length=164, Percent_Identity=26.219512195122, Blast_Score=64, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6320241, Length=142, Percent_Identity=33.0985915492958, Blast_Score=72, Evalue=6e-14, Organism=Drosophila melanogaster, GI20129971, Length=254, Percent_Identity=30.7086614173228, Blast_Score=98, Evalue=4e-21, Organism=Drosophila melanogaster, GI24653477, Length=254, Percent_Identity=30.7086614173228, Blast_Score=98, Evalue=4e-21, Organism=Drosophila melanogaster, GI24653139, Length=249, Percent_Identity=24.4979919678715, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI28571730, Length=191, Percent_Identity=25.6544502617801, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI28571729, Length=191, Percent_Identity=25.6544502617801, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24583165, Length=201, Percent_Identity=29.8507462686567, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24654903, Length=201, Percent_Identity=24.8756218905473, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 28598; Mature: 28467
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQPVLFSRVAASCRLTLNREDKCHAINEEMIESLDHYLNEIENDTTLRLVELTATGDK CCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCE FFCAGGDIKSWSAYSPLDMGRKWIKRGNDVFNRLRNLPQLTVANLNGHTIGGGIELALCC EEECCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCEEEECCCCEEECCCEEEEEEE DIRIARPGAKFSNPEVMLGMVPGWMGIERVLNQVGPVVGRQMLMLGKRLTAQEAQAANLI EEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEVVEIEQVESWMANQLAQLEKCGPVALAHIKQLILALENKHADYPHQLLAGLMSATQDC HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH QQATRAFAEKSSVSFHNQ HHHHHHHHHHCCCCCCCC >Mature Secondary Structure SDQPVLFSRVAASCRLTLNREDKCHAINEEMIESLDHYLNEIENDTTLRLVELTATGDK CCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCE FFCAGGDIKSWSAYSPLDMGRKWIKRGNDVFNRLRNLPQLTVANLNGHTIGGGIELALCC EEECCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCEEEECCCCEEECCCEEEEEEE DIRIARPGAKFSNPEVMLGMVPGWMGIERVLNQVGPVVGRQMLMLGKRLTAQEAQAANLI EEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEVVEIEQVESWMANQLAQLEKCGPVALAHIKQLILALENKHADYPHQLLAGLMSATQDC HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH QQATRAFAEKSSVSFHNQ HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA