Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156978312

Identifier: 156978312

GI number: 156978312

Start: 2189985

End: 2190380

Strand: Reverse

Name: 156978312

Synonym: VIBHAR_07119

Alternate gene names: NA

Gene position: 2190380-2189985 (Counterclockwise)

Preceding gene: 156978313

Following gene: 156978304

Centisome position: 99.38

GC content: 43.18

Gene sequence:

>396_bases
ATGGAACACATACTGCAGTTAGACTGGGTTGACCAAAGCATTCCCCATAAAGTTTGGGTGGAGCAATACTACGACGGTTG
CCGCATTTGTTTAAAAGTCGTCAAGGATGTTGAGCCAGAAATGCTCTCACTGATTGTGCCTAATATTGATGTAAAAAGCG
TTCGTCAGGCATGGCAAGACAAAGCTATCAACGTTACACCTGCTTATGATGATGGCGTACTTTTCACTCAAACCCGTTCA
TTATTCAACCTCCCTCATGGGTGCGTGATTTGGGCAGTGACTCATATCAAGATGCAAAATGGTTTGAAGATGTCCGCAGA
CAAACTCTGTTTTGTACCAAAACACTCAAAGCAAGATTCTCGCTTTCAACAAGAGCATCATGCTGAGGCATGTTAA

Upstream 100 bases:

>100_bases
TACGAATTCGGTCACGGGCTAAGTTACGAATAACCTTTTACCCACCTAACAAGGCAGTGTCTCGGCGCTGCCTTTGTTGG
ATCTACTTTAGGAATAAACC

Downstream 100 bases:

>100_bases
ATCAGTAAGGTCAGCCCAGTAGCTGACCTTGTTTTTGTTTATTCTTGAAGGTTAATCTCTGAGCTTACACTTCATAAGAG
GTGCCTCATATCCCCATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MEHILQLDWVDQSIPHKVWVEQYYDGCRICLKVVKDVEPEMLSLIVPNIDVKSVRQAWQDKAINVTPAYDDGVLFTQTRS
LFNLPHGCVIWAVTHIKMQNGLKMSADKLCFVPKHSKQDSRFQQEHHAEAC

Sequences:

>Translated_131_residues
MEHILQLDWVDQSIPHKVWVEQYYDGCRICLKVVKDVEPEMLSLIVPNIDVKSVRQAWQDKAINVTPAYDDGVLFTQTRS
LFNLPHGCVIWAVTHIKMQNGLKMSADKLCFVPKHSKQDSRFQQEHHAEAC
>Mature_131_residues
MEHILQLDWVDQSIPHKVWVEQYYDGCRICLKVVKDVEPEMLSLIVPNIDVKSVRQAWQDKAINVTPAYDDGVLFTQTRS
LFNLPHGCVIWAVTHIKMQNGLKMSADKLCFVPKHSKQDSRFQQEHHAEAC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15159; Mature: 15159

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHILQLDWVDQSIPHKVWVEQYYDGCRICLKVVKDVEPEMLSLIVPNIDVKSVRQAWQD
CCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHC
KAINVTPAYDDGVLFTQTRSLFNLPHGCVIWAVTHIKMQNGLKMSADKLCFVPKHSKQDS
CCCCCCCCCCCCEEEEECHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHH
RFQQEHHAEAC
HHHHHHCCCCC
>Mature Secondary Structure
MEHILQLDWVDQSIPHKVWVEQYYDGCRICLKVVKDVEPEMLSLIVPNIDVKSVRQAWQD
CCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHC
KAINVTPAYDDGVLFTQTRSLFNLPHGCVIWAVTHIKMQNGLKMSADKLCFVPKHSKQDS
CCCCCCCCCCCCEEEEECHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHH
RFQQEHHAEAC
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA