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The map label for this gene is 156978294

Identifier: 156978294

GI number: 156978294

Start: 2174281

End: 2174547

Strand: Direct

Name: 156978294

Synonym: VIBHAR_07101

Alternate gene names: NA

Gene position: 2174281-2174547 (Clockwise)

Preceding gene: 156978292

Following gene: 156978296

Centisome position: 98.65

GC content: 43.45

Gene sequence:

>267_bases
ATGGTTATTCAAATCACTAGGTTCATTATGAAACTTTTAGTAAGAAACTTGGCTCGTCAAACGACTGAGCAAGATATGCG
TGCACTATTCTCTGAGCACGGCAAAGTGGAACTTTGTACATTGGTTCTTGATCAAGAAACCGGTTTATCAAAAGGCTTCG
GCTTTGTGATCATGCCAGATGAAGCAGAAGCGATTGCTGCACTGGAAGCGCTGAACATGACCAGCGTAGCGAAAAGCAAG
ATTCGCGTGAAAGTCGCTCAAGACTAA

Upstream 100 bases:

>100_bases
AAATAAACGAAAAATCATTTAAACAGATGTACTTAGAATGATCTAGTTGTCCGCACAATATTATTCACTTGGTTTGCTTG
GAAGAACCTGAGAGAATTGT

Downstream 100 bases:

>100_bases
GAGAGAGAAAAGCCAGCATCACTGCTGGCTTTTTTGTATTAAGTCATTCTCAGTTATCACTCTTATGTTCAAGTTATTTT
ATTTATTGCGCTAACCACTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MVIQITRFIMKLLVRNLARQTTEQDMRALFSEHGKVELCTLVLDQETGLSKGFGFVIMPDEAEAIAALEALNMTSVAKSK
IRVKVAQD

Sequences:

>Translated_88_residues
MVIQITRFIMKLLVRNLARQTTEQDMRALFSEHGKVELCTLVLDQETGLSKGFGFVIMPDEAEAIAALEALNMTSVAKSK
IRVKVAQD
>Mature_88_residues
MVIQITRFIMKLLVRNLARQTTEQDMRALFSEHGKVELCTLVLDQETGLSKGFGFVIMPDEAEAIAALEALNMTSVAKSK
IRVKVAQD

Specific function: Unknown

COG id: COG0724

COG function: function code R; RNA-binding proteins (RRM domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9810; Mature: 9810

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS50102 RRM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIQITRFIMKLLVRNLARQTTEQDMRALFSEHGKVELCTLVLDQETGLSKGFGFVIMPD
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCEEEECC
EAEAIAALEALNMTSVAKSKIRVKVAQD
CHHHHHHHHHHHHHHHHHHHEEEEEECC
>Mature Secondary Structure
MVIQITRFIMKLLVRNLARQTTEQDMRALFSEHGKVELCTLVLDQETGLSKGFGFVIMPD
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCEEEECC
EAEAIAALEALNMTSVAKSKIRVKVAQD
CHHHHHHHHHHHHHHHHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA