| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is parA [H]
Identifier: 156978243
GI number: 156978243
Start: 2122868
End: 2124085
Strand: Direct
Name: parA [H]
Synonym: VIBHAR_07049
Alternate gene names: 156978243
Gene position: 2122868-2124085 (Clockwise)
Preceding gene: 156978239
Following gene: 156978244
Centisome position: 96.32
GC content: 45.81
Gene sequence:
>1218_bases ATGAAAAGAGAAACAACGATTGAAAATCTCCAAGAGTTAGCGGAACTTACCCAACAAGTTCAAGCTGACCGCATTGAGAT TGTTTTGGAAGAGCGTAGTGACAACTACTTCCCACCAATGTCTAAGGCAATGATGGAAACCCGCTCAGGTTTGACTCGCC GTAAGCTGGACGATGCTATCGGTAAGATGGAAGCGGAAGGTCATCAATTTACAAAGAATAATGCCAACCATTATTCAATC ACGCTTGAAGAAGCGCATATGCTAATGGATGCGGCAGAAGTGCCTAAATTCCATGAACGCAAAAAGAATTCTGAAAACAA ACCGTGGATCATCAACGTACAAAACCAAAAGGGTGGTACGGGTAAGTCCATGACAGCGGTTCACTTAGCGGCATGTCTGG CGCTAAACCTAGATAAGCGTTACCGCATTTGTTTGATTGACCTTGACCCTCAGGGCTCTCTGCGTCTGTTCTTGAACCCA CAAATCAGTGTGGCAGAGCACGACAACATCTATTCAGCGGTTGATATCATGCTTGGTAACGTGCCAGATGGCGTTGAAAT CGATCGTGAGTTTCTACACAAGAACGTGTTGTTGCCAACGCAATACCCGAACTTGAAGTCGATTTCTGCTTTCCCAGAAG ACGCAATGTTCAACGCAGAAGCGTGGCAAACACTCTCTGAAGACCCATCGCTAGATATCGTTCGTCTGTTGAAAGAGCAG TTGATTGACAAGATCGCGAATGACTTCGACGTGATTATGATTGATACCGGTCCACACGTTGACCCGCTAGTATGGAATGC AATGTACGCATCAAACGCGCTTTTGATTCCTTGTGCTGCGAAGCGTCTCGACTGGGCTTCTACAGTAAACTTCTTCCAAC ACCTTCCAACGGTTTACGAGATGTTCCCAGAGGATTGGAATGGTCTTGAGTTTGTTCGTTTGATGCCTACCATGTTTGAA GACGACAACAAAAAGCAAGTTTCTGTTCTAACTGAAATGAACTATCTACTAGGTGATCAAGTTATGATGGCCACTATTCC TCGTAGTCGCGCATTCGAAACCTGTGCTGACACCTACAGCACCGTGTTTGACTTAACCGTAGGCGACTTCGAAGGTGGTA AGAAAACACTCGCTACTGCACAAGATGCGGTACATAAGAGTGCACTAGAATTAGAGCGCGTACTGCACTCTAACTGGCCG TCACTGAATCAGGGGTAA
Upstream 100 bases:
>100_bases TTTATGTGATGGTTATTCAAAATGTTCGTGCACCTTTTTGTTGTTTTAGGATTGCAGTGCTGTACAATTAAAAACAGATA TCCTTCCAACGGAATTTGGC
Downstream 100 bases:
>100_bases TGAATAAATGGCATTGAAAACGTCAGAATTAAACGCGAAATTATTTGGTAAAACCAATAAGCGTCGTGTTGCGACACCTC AAGAAGCGCAAACGGCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MKRETTIENLQELAELTQQVQADRIEIVLEERSDNYFPPMSKAMMETRSGLTRRKLDDAIGKMEAEGHQFTKNNANHYSI TLEEAHMLMDAAEVPKFHERKKNSENKPWIINVQNQKGGTGKSMTAVHLAACLALNLDKRYRICLIDLDPQGSLRLFLNP QISVAEHDNIYSAVDIMLGNVPDGVEIDREFLHKNVLLPTQYPNLKSISAFPEDAMFNAEAWQTLSEDPSLDIVRLLKEQ LIDKIANDFDVIMIDTGPHVDPLVWNAMYASNALLIPCAAKRLDWASTVNFFQHLPTVYEMFPEDWNGLEFVRLMPTMFE DDNKKQVSVLTEMNYLLGDQVMMATIPRSRAFETCADTYSTVFDLTVGDFEGGKKTLATAQDAVHKSALELERVLHSNWP SLNQG
Sequences:
>Translated_405_residues MKRETTIENLQELAELTQQVQADRIEIVLEERSDNYFPPMSKAMMETRSGLTRRKLDDAIGKMEAEGHQFTKNNANHYSI TLEEAHMLMDAAEVPKFHERKKNSENKPWIINVQNQKGGTGKSMTAVHLAACLALNLDKRYRICLIDLDPQGSLRLFLNP QISVAEHDNIYSAVDIMLGNVPDGVEIDREFLHKNVLLPTQYPNLKSISAFPEDAMFNAEAWQTLSEDPSLDIVRLLKEQ LIDKIANDFDVIMIDTGPHVDPLVWNAMYASNALLIPCAAKRLDWASTVNFFQHLPTVYEMFPEDWNGLEFVRLMPTMFE DDNKKQVSVLTEMNYLLGDQVMMATIPRSRAFETCADTYSTVFDLTVGDFEGGKKTLATAQDAVHKSALELERVLHSNWP SLNQG >Mature_405_residues MKRETTIENLQELAELTQQVQADRIEIVLEERSDNYFPPMSKAMMETRSGLTRRKLDDAIGKMEAEGHQFTKNNANHYSI TLEEAHMLMDAAEVPKFHERKKNSENKPWIINVQNQKGGTGKSMTAVHLAACLALNLDKRYRICLIDLDPQGSLRLFLNP QISVAEHDNIYSAVDIMLGNVPDGVEIDREFLHKNVLLPTQYPNLKSISAFPEDAMFNAEAWQTLSEDPSLDIVRLLKEQ LIDKIANDFDVIMIDTGPHVDPLVWNAMYASNALLIPCAAKRLDWASTVNFFQHLPTVYEMFPEDWNGLEFVRLMPTMFE DDNKKQVSVLTEMNYLLGDQVMMATIPRSRAFETCADTYSTVFDLTVGDFEGGKKTLATAQDAVHKSALELERVLHSNWP SLNQG
Specific function: This protein is essential for plasmid partition. It ensures the proper distribution of newly replicated plasmids to daughter cells during cell division. ParA is trans-acting [H]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 45967; Mature: 45967
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRETTIENLQELAELTQQVQADRIEIVLEERSDNYFPPMSKAMMETRSGLTRRKLDDAI CCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHH GKMEAEGHQFTKNNANHYSITLEEAHMLMDAAEVPKFHERKKNSENKPWIINVQNQKGGT HHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEEECCCCCC GKSMTAVHLAACLALNLDKRYRICLIDLDPQGSLRLFLNPQISVAEHDNIYSAVDIMLGN CCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEECCCEEECCCCCHHHHHHHHCCC VPDGVEIDREFLHKNVLLPTQYPNLKSISAFPEDAMFNAEAWQTLSEDPSLDIVRLLKEQ CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHCCCCCHHHHHHHHHH LIDKIANDFDVIMIDTGPHVDPLVWNAMYASNALLIPCAAKRLDWASTVNFFQHLPTVYE HHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCEEEEECHHHHCCHHHHHHHHHHCCHHHH MFPEDWNGLEFVRLMPTMFEDDNKKQVSVLTEMNYLLGDQVMMATIPRSRAFETCADTYS HCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH TVFDLTVGDFEGGKKTLATAQDAVHKSALELERVLHSNWPSLNQG HHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKRETTIENLQELAELTQQVQADRIEIVLEERSDNYFPPMSKAMMETRSGLTRRKLDDAI CCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHH GKMEAEGHQFTKNNANHYSITLEEAHMLMDAAEVPKFHERKKNSENKPWIINVQNQKGGT HHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEEECCCCCC GKSMTAVHLAACLALNLDKRYRICLIDLDPQGSLRLFLNPQISVAEHDNIYSAVDIMLGN CCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEECCCEEECCCCCHHHHHHHHCCC VPDGVEIDREFLHKNVLLPTQYPNLKSISAFPEDAMFNAEAWQTLSEDPSLDIVRLLKEQ CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHCCCCCHHHHHHHHHH LIDKIANDFDVIMIDTGPHVDPLVWNAMYASNALLIPCAAKRLDWASTVNFFQHLPTVYE HHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCEEEEECHHHHCCHHHHHHHHHHCCHHHH MFPEDWNGLEFVRLMPTMFEDDNKKQVSVLTEMNYLLGDQVMMATIPRSRAFETCADTYS HCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH TVFDLTVGDFEGGKKTLATAQDAVHKSALELERVLHSNWPSLNQG HHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3903163; 1836760 [H]